RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TRMT1LQ7Z2T5 733 aaKnown RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 ARHGEF2Q92974 986 aaKnown RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 ZNF830Q96NB3 372 aaPredicted RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 GDPD2Q9HCC8 539 aa11.69□□□□□ -0.54
COL4A4-201ENST00000396625 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
COL4A4-201ENST00000396625 ERICH3Q5RHP9 1530 aa11.69□□□□□ -0.54
COL4A4-201ENST00000396625 UAP1Q16222 522 aaPredicted RBP11.69□□□□□ -0.54
COL4A4-201ENST00000396625 SH3BGRP55822 239 aaPredicted RBP11.69□□□□□ -0.54
COL4A4-201ENST00000396625 DACT3Q96B18 629 aaPredicted RBP11.69□□□□□ -0.54
COL4A4-201ENST00000396625 MGEA5O60502 916 aa11.69□□□□□ -0.54
COL4A4-201ENST00000396625 CETN3O15182 167 aa11.69□□□□□ -0.54
COL4A4-201ENST00000396625 SPG7Q9UQ90 795 aa11.69□□□□□ -0.54
COL4A4-201ENST00000396625 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
COL4A4-201ENST00000396625 WDHD1O75717 1129 aaPredicted RBP11.69□□□□□ -0.54
COL4A4-201ENST00000396625 GBP5Q96PP8 586 aa11.69□□□□□ -0.54
COL4A4-201ENST00000396625 PANK2Q9BZ23 570 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 IFIT3O14879 490 aaKnown RBP11.68□□□□□ -0.54
COL4A4-201ENST00000396625 MAP3K12Q12852 859 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 CCDC65Q8IXS2 484 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 ATP6V0A2Q9Y487 856 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.68□□□□□ -0.54
COL4A4-201ENST00000396625 BICDL2A1A5D9 508 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 ZNF131P52739 623 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 CCDC38Q502W7 563 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
COL4A4-201ENST00000396625 ZBTB17Q13105 803 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 RRAGBQ5VZM2 374 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
COL4A4-201ENST00000396625 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 CLUL1Q15846 466 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 HSP90AA4PQ58FG1 418 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 PRPF31Q8WWY3 499 aaKnown RBP11.68□□□□□ -0.54
COL4A4-201ENST00000396625 AFAP1L2Q8N4X5 818 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
COL4A4-201ENST00000396625 ZNF444Q8N0Y2 327 aaPredicted RBP11.68□□□□□ -0.54
COL4A4-201ENST00000396625 KRT83P78385 493 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 TRPC3Q13507 836 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 PSMD6Q15008 389 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 INF2Q27J81 1249 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 MICU3Q86XE3 530 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 ZNF213O14771 459 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 HAUS7Q99871 368 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 IMPG2Q9BZV3 1241 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 XAB2Q9HCS7 855 aaKnown RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 VCX3AQ9NNX9 186 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 GUCA1BQ9UMX6 200 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 FAM169AQ9Y6X4 670 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 EFCAB5A4FU69 1503 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 TUBB4AP04350 444 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
COL4A4-201ENST00000396625 INPP5BP32019 993 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 OGFRQ9NZT2 677 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 HECW1Q76N89 1606 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 ARFGAP2Q8N6H7 521 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 GIMAP6Q6P9H5 292 aa11.67□□□□□ -0.54
COL4A4-201ENST00000396625 TNNC1P63316 161 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 UBXN1Q04323 297 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 BOLA2Q9H3K6 86 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 I3L4J1 428 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 AFMP43652 599 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 METAP2P50579 478 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL4A4-201ENST00000396625 TMEM67Q5HYA8 995 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 MIER3Q7Z3K6 550 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 SLF2Q8IX21 1173 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 ARHGAP24Q8N264 748 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 ESCO1Q5FWF5 840 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 DPH6Q7L8W6 267 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 RUFY3Q7L099 469 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 COG7P83436 770 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 CUL4BQ13620 913 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 SEL1L2Q5TEA6 688 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 MSANTD4Q8NCY6 345 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 GOLGA4Q13439 2230 aaKnown RBP11.66□□□□□ -0.54
COL4A4-201ENST00000396625 SLC5A1P13866 664 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 TXNDC9O14530 226 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
COL4A4-201ENST00000396625 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
COL4A4-201ENST00000396625 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
COL4A4-201ENST00000396625 RAB3IPQ96QF0 476 aaPredicted RBP11.65□□□□□ -0.54
COL4A4-201ENST00000396625 CNGA1P29973 690 aa11.65□□□□□ -0.54
COL4A4-201ENST00000396625 DIXDC1Q155Q3 683 aa11.65□□□□□ -0.54
COL4A4-201ENST00000396625 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
COL4A4-201ENST00000396625 RNF10Q8N5U6 811 aaKnown RBP11.65□□□□□ -0.54
COL4A4-201ENST00000396625 ZSCAN16Q9H4T2 348 aaPredicted RBP11.65□□□□□ -0.54
COL4A4-201ENST00000396625 TPX2Q9ULW0 747 aaKnown RBP11.65□□□□□ -0.54
COL4A4-201ENST00000396625 TLDC2A0PJX2 215 aa11.65□□□□□ -0.54
COL4A4-201ENST00000396625 TBC1D2Q9BYX2 928 aa11.65□□□□□ -0.54
COL4A4-201ENST00000396625 TFIP11Q9UBB9 837 aaKnown RBP11.65□□□□□ -0.54
COL4A4-201ENST00000396625 CALCOCO2Q13137 446 aa11.65□□□□□ -0.54
COL4A4-201ENST00000396625 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
COL4A4-201ENST00000396625 RASA3Q14644 834 aa11.65□□□□□ -0.55
COL4A4-201ENST00000396625 AOPEPQ8N6M6 819 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms