RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 XAGE2Q96GT9 111 aa19.26■□□□□ 0.67
SNX6-202ENST00000396526 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
SNX6-202ENST00000396526 CRKLP46109 303 aaKnown RBP19.26■□□□□ 0.67
SNX6-202ENST00000396526 ADCK5Q3MIX3 580 aa19.26■□□□□ 0.67
SNX6-202ENST00000396526 ZNF589Q86UQ0 364 aaPredicted RBP19.26■□□□□ 0.67
SNX6-202ENST00000396526 ZNF609O15014 1411 aa19.26■□□□□ 0.67
SNX6-202ENST00000396526 FOXD4L5Q5VV16 416 aaPredicted RBP19.26■□□□□ 0.67
SNX6-202ENST00000396526 FOXD4L4Q8WXT5 416 aaPredicted RBP19.26■□□□□ 0.67
SNX6-202ENST00000396526 NDUFB9Q9Y6M9 179 aa19.26■□□□□ 0.67
SNX6-202ENST00000396526 RNF113AO15541 343 aaKnown RBP19.25■□□□□ 0.67
SNX6-202ENST00000396526 FGD1P98174 961 aa19.25■□□□□ 0.67
SNX6-202ENST00000396526 ZNF34Q8IZ26 560 aa19.25■□□□□ 0.67
SNX6-202ENST00000396526 UTP14AQ9BVJ6 771 aaKnown RBP19.25■□□□□ 0.67
SNX6-202ENST00000396526 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
SNX6-202ENST00000396526 USPL1Q5W0Q7 1092 aa19.25■□□□□ 0.67
SNX6-202ENST00000396526 PRPF40AO75400 957 aaKnown RBP19.24■□□□□ 0.67
SNX6-202ENST00000396526 MRE11P49959 708 aa19.24■□□□□ 0.67
SNX6-202ENST00000396526 GREM2Q9H772 168 aa19.24■□□□□ 0.67
SNX6-202ENST00000396526 CPA1P15085 419 aa19.24■□□□□ 0.67
SNX6-202ENST00000396526 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
SNX6-202ENST00000396526 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
SNX6-202ENST00000396526 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.24■□□□□ 0.67
SNX6-202ENST00000396526 MBD3O95983 291 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 C8orf37Q96NL8 207 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 DSCC1Q9BVC3 393 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 ZDHHC9Q9Y397 364 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 RPS6KB1P23443 525 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 ZMYM1Q5SVZ6 1142 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 ALDH8A1Q9H2A2 487 aaPredicted RBP19.23■□□□□ 0.67
SNX6-202ENST00000396526 CCDC83Q8IWF9 413 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 RIPOR2Q9Y4F9 1068 aa19.23■□□□□ 0.67
SNX6-202ENST00000396526 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
SNX6-202ENST00000396526 PDCP20941 246 aa19.22■□□□□ 0.67
SNX6-202ENST00000396526 INTS5Q6P9B9 1019 aaKnown RBP19.22■□□□□ 0.67
SNX6-202ENST00000396526 CHMP4CQ96CF2 233 aa19.22■□□□□ 0.67
SNX6-202ENST00000396526 MPHOSPH8Q99549 860 aa19.22■□□□□ 0.67
SNX6-202ENST00000396526 CTNNA3Q9UI47 895 aa19.22■□□□□ 0.67
SNX6-202ENST00000396526 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
SNX6-202ENST00000396526 WASHC4Q2M389 1173 aa19.22■□□□□ 0.67
SNX6-202ENST00000396526 TTF1Q15361 905 aaPredicted RBP19.21■□□□□ 0.67
SNX6-202ENST00000396526 SYNE4Q8N205 404 aa19.21■□□□□ 0.67
SNX6-202ENST00000396526 LMBRD1Q9NUN5 540 aa19.21■□□□□ 0.67
SNX6-202ENST00000396526 TJP1Q07157 1748 aa19.21■□□□□ 0.67
SNX6-202ENST00000396526 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
SNX6-202ENST00000396526 VPS72Q15906 364 aa19.21■□□□□ 0.67
SNX6-202ENST00000396526 LARP6Q9BRS8 491 aaKnown RBP19.21■□□□□ 0.67
SNX6-202ENST00000396526 SLIT2O94813 1529 aa19.21■□□□□ 0.67
SNX6-202ENST00000396526 STX6O43752 255 aa19.21■□□□□ 0.67
SNX6-202ENST00000396526 SEC62Q99442 399 aaKnown RBP19.21■□□□□ 0.67
SNX6-202ENST00000396526 JCADQ9P266 1359 aa19.2■□□□□ 0.66
SNX6-202ENST00000396526 UQCRFS1P1P0C7P4 283 aa19.2■□□□□ 0.66
SNX6-202ENST00000396526 CSPP1Q1MSJ5 1256 aa19.2■□□□□ 0.66
SNX6-202ENST00000396526 CCDC152Q4G0S7 254 aa19.2■□□□□ 0.66
SNX6-202ENST00000396526 CCDC129Q6ZRS4 1044 aa19.2■□□□□ 0.66
SNX6-202ENST00000396526 MROH5Q6ZUA9 1318 aa19.2■□□□□ 0.66
SNX6-202ENST00000396526 NIP7Q9Y221 180 aaKnown RBP eCLIP19.2■□□□□ 0.66
SNX6-202ENST00000396526 PDE8BO95263 885 aa19.19■□□□□ 0.66
SNX6-202ENST00000396526 FSD2A1L4K1 749 aa19.19■□□□□ 0.66
SNX6-202ENST00000396526 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
SNX6-202ENST00000396526 SYAP1Q96A49 352 aaPredicted RBP19.19■□□□□ 0.66
SNX6-202ENST00000396526 ZSCAN22P10073 491 aaPredicted RBP19.19■□□□□ 0.66
SNX6-202ENST00000396526 ADORA1P30542 326 aa19.19■□□□□ 0.66
SNX6-202ENST00000396526 IGHMBP2P38935 993 aaKnown RBP19.19■□□□□ 0.66
SNX6-202ENST00000396526 GJB2P29033 226 aa19.18■□□□□ 0.66
SNX6-202ENST00000396526 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
SNX6-202ENST00000396526 SLC5A1P13866 664 aa19.18■□□□□ 0.66
SNX6-202ENST00000396526 PUM3Q15397 648 aaKnown RBP19.18■□□□□ 0.66
SNX6-202ENST00000396526 SUSD4Q5VX71 490 aa19.18■□□□□ 0.66
SNX6-202ENST00000396526 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
SNX6-202ENST00000396526 SYT1P21579 422 aa19.17■□□□□ 0.66
SNX6-202ENST00000396526 ITPK1Q13572 414 aa19.17■□□□□ 0.66
SNX6-202ENST00000396526 ME3Q16798 604 aa19.17■□□□□ 0.66
SNX6-202ENST00000396526 LPIN2Q92539 896 aa19.17■□□□□ 0.66
SNX6-202ENST00000396526 ZNF512BQ96KM6 892 aaPredicted RBP19.17■□□□□ 0.66
SNX6-202ENST00000396526 UBN2Q6ZU65 1347 aa19.17■□□□□ 0.66
SNX6-202ENST00000396526 DOT1LQ8TEK3 1739 aa19.17■□□□□ 0.66
SNX6-202ENST00000396526 CAMTA2O94983 1202 aa19.16■□□□□ 0.66
SNX6-202ENST00000396526 CAVIN1Q6NZI2 390 aaKnown RBP19.16■□□□□ 0.66
SNX6-202ENST00000396526 APPBP2Q92624 585 aa19.16■□□□□ 0.66
SNX6-202ENST00000396526 CYP21A2P08686 494 aa19.16■□□□□ 0.66
SNX6-202ENST00000396526 HCLS1P14317 486 aaPredicted RBP19.16■□□□□ 0.66
SNX6-202ENST00000396526 GRPEL1Q9HAV7 217 aa19.16■□□□□ 0.66
SNX6-202ENST00000396526 TPCN1Q9ULQ1 816 aa19.16■□□□□ 0.66
SNX6-202ENST00000396526 NWD2Q9ULI1 1742 aa19.16■□□□□ 0.66
SNX6-202ENST00000396526 GTF2E1P29083 439 aaPredicted RBP19.16■□□□□ 0.66
SNX6-202ENST00000396526 ZAP70P43403 619 aa19.16■□□□□ 0.66
SNX6-202ENST00000396526 HSPD1P10809 573 aaKnown RBP19.15■□□□□ 0.66
SNX6-202ENST00000396526 LARP1BQ659C4 914 aaKnown RBP19.15■□□□□ 0.66
SNX6-202ENST00000396526 DHX32Q7L7V1 743 aaKnown RBP19.15■□□□□ 0.66
SNX6-202ENST00000396526 KIF3AQ9Y496 699 aa19.15■□□□□ 0.66
SNX6-202ENST00000396526 IMMTQ16891 758 aaKnown RBP19.15■□□□□ 0.66
SNX6-202ENST00000396526 MAST3O60307 1309 aa19.15■□□□□ 0.66
SNX6-202ENST00000396526 NRAPQ86VF7 1730 aa19.15■□□□□ 0.66
SNX6-202ENST00000396526 KCNQ2O43526 872 aa19.15■□□□□ 0.66
SNX6-202ENST00000396526 NECAB1Q8N987 351 aa19.15■□□□□ 0.66
SNX6-202ENST00000396526 CDC5LQ99459 802 aaKnown RBP19.15■□□□□ 0.66
SNX6-202ENST00000396526 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
SNX6-202ENST00000396526 LARGE1O95461 756 aa19.14■□□□□ 0.65
SNX6-202ENST00000396526 TCEANC2Q96MN5 208 aa19.14■□□□□ 0.65
SNX6-202ENST00000396526 USP21Q9UK80 565 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms