RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 BRMS1Q9HCU9 246 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 FMN2Q9NZ56 1722 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 AK9Q5TCS8 1911 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 BCL9LQ86UU0 1499 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 PSMD2Q13200 908 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 GCC1Q96CN9 775 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.81□□□□□ -0.84
NDE1-202ENST00000396355 KIF2AO00139 706 aaPredicted RBP9.81□□□□□ -0.84
NDE1-202ENST00000396355 KCNQ2O43526 872 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 GCP02774 474 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 FKBP5Q13451 457 aaPredicted RBP9.81□□□□□ -0.84
NDE1-202ENST00000396355 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 MCM10Q7L590 875 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 DNAI1Q9UI46 699 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.81□□□□□ -0.84
NDE1-202ENST00000396355 CHD2O14647 1828 aaKnown RBP9.81□□□□□ -0.84
NDE1-202ENST00000396355 EIF3JO75822 258 aaKnown RBP9.8□□□□□ -0.84
NDE1-202ENST00000396355 SKILP12757 684 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 LIG1P18858 919 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 POLD1P28340 1107 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 HSP90AB2PQ58FF8 381 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 NUP133Q8WUM0 1156 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 NWD1Q149M9 1564 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 CLSTN1O94985 981 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 FBXO38Q6PIJ6 1188 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 UPF3BQ9BZI7 483 aaKnown RBP9.8□□□□□ -0.84
NDE1-202ENST00000396355 ARFGAP3Q9NP61 516 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 LMBRD1Q9NUN5 540 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 WWC3Q9ULE0 1092 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 SEC31AO94979 1220 aaKnown RBP9.8□□□□□ -0.84
NDE1-202ENST00000396355 SNW1Q13573 536 aaKnown RBP9.8□□□□□ -0.84
NDE1-202ENST00000396355 FERMT3Q86UX7 667 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 DDX11Q96FC9 970 aa9.8□□□□□ -0.84
NDE1-202ENST00000396355 C16orf71Q8IYS4 520 aaPredicted RBP9.79□□□□□ -0.84
NDE1-202ENST00000396355 OTUD7AQ8TE49 926 aaPredicted RBP9.79□□□□□ -0.84
NDE1-202ENST00000396355 ATP6V1DQ9Y5K8 247 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 SPATA31A5Q5VU36 1347 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 TTC21BQ7Z4L5 1316 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 SPATA31A7Q8IWB4 1347 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 USP6P35125 1406 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 ERLIN2O94905 339 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 RPSAP08865 295 aaKnown RBP9.79□□□□□ -0.84
NDE1-202ENST00000396355 ARMCX6Q7L4S7 300 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 SMC3Q9UQE7 1217 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 KDM4AO75164 1064 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 CCDC183Q5T5S1 534 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 SNX21Q969T3 373 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 YY1AP1Q9H869 796 aa9.79□□□□□ -0.84
NDE1-202ENST00000396355 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
NDE1-202ENST00000396355 CDC45O75419 566 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 KMT5BQ4FZB7 885 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.78□□□□□ -0.84
NDE1-202ENST00000396355 SSH2Q76I76 1423 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 TMCO5BA8MYB1 307 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 SMC1AQ14683 1233 aaKnown RBP9.78□□□□□ -0.84
NDE1-202ENST00000396355 RNF20Q5VTR2 975 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 NAIF1Q69YI7 327 aaPredicted RBP9.78□□□□□ -0.84
NDE1-202ENST00000396355 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 GPT2Q8TD30 523 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
NDE1-202ENST00000396355 CRB1P82279 1406 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 MFSD4BQ5TF39 518 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 LUZP1Q86V48 1076 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 N4BP2L2Q92802 583 aaPredicted RBP9.78□□□□□ -0.84
NDE1-202ENST00000396355 SIRT1Q96EB6 747 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
NDE1-202ENST00000396355 RUFY1Q96T51 708 aa9.78□□□□□ -0.84
NDE1-202ENST00000396355 NSFL1CQ9UNZ2 370 aaKnown RBP9.78□□□□□ -0.84
NDE1-202ENST00000396355 CHL1O00533 1208 aa9.77□□□□□ -0.84
NDE1-202ENST00000396355 ST5P78524 1137 aa9.77□□□□□ -0.84
NDE1-202ENST00000396355 CWC27Q6UX04 472 aaKnown RBP9.77□□□□□ -0.84
NDE1-202ENST00000396355 SMARCE1Q969G3 411 aa9.77□□□□□ -0.84
NDE1-202ENST00000396355 MIS18AQ9NYP9 233 aa9.77□□□□□ -0.84
NDE1-202ENST00000396355 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.84
NDE1-202ENST00000396355 INTS3Q68E01 1043 aaKnown RBP9.77□□□□□ -0.85
NDE1-202ENST00000396355 EGFL6Q8IUX8 553 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 LRRCC1Q9C099 1032 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 TFCP2L1Q9NZI6 479 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 LCMT1Q9UIC8 334 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 MARF1Q9Y4F3 1742 aaKnown RBP9.77□□□□□ -0.85
NDE1-202ENST00000396355 MAP3K19Q56UN5 1328 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 SHTN1A0MZ66 631 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 CAND2O75155 1236 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
NDE1-202ENST00000396355 MCM2P49736 904 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 USP48Q86UV5 1035 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 NUCKS1Q9H1E3 243 aaKnown RBP9.77□□□□□ -0.85
NDE1-202ENST00000396355 XIRP1Q702N8 1843 aaKnown RBP9.77□□□□□ -0.85
NDE1-202ENST00000396355 PIK3C2AO00443 1686 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 SBNO1A3KN83 1393 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 RTL1A6NKG5 1358 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 SPATA31A1Q5TZJ5 1347 aa9.77□□□□□ -0.85
NDE1-202ENST00000396355 A0A1B0GUA9 196 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 SCP2P22307 547 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 ANKRD18AQ8IVF6 992 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 ERO1AQ96HE7 468 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms