RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 FAM177BA6PVY3 158 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 SRGNP10124 158 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 RTL5Q5HYW3 569 aaPredicted RBP10.85□□□□□ -0.67
CCR9-203ENST00000395963 ILDR2Q71H61 639 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCR9-203ENST00000395963 CNKSR1Q969H4 720 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 CNNM1Q9NRU3 951 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 CD2APQ9Y5K6 639 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 SALL3Q9BXA9 1300 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 DUOX1Q9NRD9 1551 aa10.84□□□□□ -0.67
CCR9-203ENST00000395963 SASH1O94885 1247 aa10.84□□□□□ -0.67
CCR9-203ENST00000395963 JARID2Q92833 1246 aaPredicted RBP10.84□□□□□ -0.67
CCR9-203ENST00000395963 SGIP1Q9BQI5 828 aa10.84□□□□□ -0.67
CCR9-203ENST00000395963 H0YIN7 160 aa10.84□□□□□ -0.67
CCR9-203ENST00000395963 ERC2O15083 957 aa10.84□□□□□ -0.67
CCR9-203ENST00000395963 UBE4AQ14139 1066 aa10.84□□□□□ -0.67
CCR9-203ENST00000395963 ZNF512BQ96KM6 892 aaPredicted RBP10.84□□□□□ -0.67
CCR9-203ENST00000395963 PDE8BO95263 885 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 R3HDM1Q15032 1099 aaKnown RBP10.83□□□□□ -0.68
CCR9-203ENST00000395963 PUM3Q15397 648 aaKnown RBP10.83□□□□□ -0.68
CCR9-203ENST00000395963 TNNI3KQ59H18 835 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 C15orf52Q6ZUT6 534 aaKnown RBP10.83□□□□□ -0.68
CCR9-203ENST00000395963 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 FPGT-TNNI3KV9GXZ4 949 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 KIAA1551Q9HCM1 1747 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 TMED8Q6PL24 325 aaPredicted RBP10.83□□□□□ -0.68
CCR9-203ENST00000395963 LPIN2Q92539 896 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 TMX4Q9H1E5 349 aaPredicted RBP10.83□□□□□ -0.68
CCR9-203ENST00000395963 PODXL2Q9NZ53 605 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 PA2G4Q9UQ80 394 aaKnown RBP10.83□□□□□ -0.68
CCR9-203ENST00000395963 LEMD3Q9Y2U8 911 aa10.83□□□□□ -0.68
CCR9-203ENST00000395963 IFIT2P09913 472 aaKnown RBP10.82□□□□□ -0.68
CCR9-203ENST00000395963 METTL24Q5JXM2 366 aa10.82□□□□□ -0.68
CCR9-203ENST00000395963 SP8Q8IXZ3 490 aa10.82□□□□□ -0.68
CCR9-203ENST00000395963 SPON1Q9HCB6 807 aa10.82□□□□□ -0.68
CCR9-203ENST00000395963 RFX7Q2KHR2 1363 aa10.82□□□□□ -0.68
CCR9-203ENST00000395963 LTBP1Q14766 1721 aa10.82□□□□□ -0.68
CCR9-203ENST00000395963 MX1P20591 662 aa10.82□□□□□ -0.68
CCR9-203ENST00000395963 LNPKQ9C0E8 428 aa10.82□□□□□ -0.68
CCR9-203ENST00000395963 XDHP47989 1333 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 PDS5AQ29RF7 1337 aaKnown RBP10.81□□□□□ -0.68
CCR9-203ENST00000395963 GLRX3O76003 335 aaKnown RBP10.81□□□□□ -0.68
CCR9-203ENST00000395963 IFIT1P09914 478 aaKnown RBP10.81□□□□□ -0.68
CCR9-203ENST00000395963 SLC5A1P13866 664 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 FGFR2P21802 821 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 BMP2KLQ5H9B9 411 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 MSL1Q68DK7 614 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 C3orf67Q6ZVT6 689 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 VPS33BQ9H267 617 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 TFCP2Q12800 502 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 LRRC24Q50LG9 513 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 C2CD5Q86YS7 1000 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 SIL1Q9H173 461 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 SEC31BQ9NQW1 1179 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 ECHDC1Q9NTX5 307 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 ATP6V0A2Q9Y487 856 aa10.81□□□□□ -0.68
CCR9-203ENST00000395963 SEMA3EO15041 775 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 UQCRFS1P1P0C7P4 283 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 ATP2B4P23634 1241 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 PDE1AP54750 535 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 CHRNDQ07001 517 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 ATP2B3Q16720 1220 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 CELF1Q92879 486 aaKnown RBP10.8□□□□□ -0.68
CCR9-203ENST00000395963 MINPP1Q9UNW1 487 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 PPEF1O14829 653 aaPredicted RBP10.8□□□□□ -0.68
CCR9-203ENST00000395963 PDE4AP27815 886 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 AACSQ86V21 672 aa10.8□□□□□ -0.68
CCR9-203ENST00000395963 ZNF594Q96JF6 807 aaPredicted RBP10.8□□□□□ -0.68
CCR9-203ENST00000395963 BRCA1P38398 1863 aaKnown RBP10.79□□□□□ -0.68
CCR9-203ENST00000395963 ATP5JP18859 108 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 PTGER2P43116 358 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 CCDC158Q5M9N0 1113 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 SUPT20HQ8NEM7 779 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 MED23Q9ULK4 1368 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 A0A1B0GUL7 405 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 SOCS7O14512 581 aa10.79□□□□□ -0.68
CCR9-203ENST00000395963 EAF2Q96CJ1 260 aaPredicted RBP10.79□□□□□ -0.68
CCR9-203ENST00000395963 PUS3Q9BZE2 481 aaKnown RBP10.79□□□□□ -0.68
CCR9-203ENST00000395963 ZBTB7AO95365 584 aa10.78□□□□□ -0.68
CCR9-203ENST00000395963 LRRFIP1Q32MZ4 808 aaKnown RBP10.78□□□□□ -0.68
CCR9-203ENST00000395963 TTC22Q5TAA0 569 aa10.78□□□□□ -0.68
CCR9-203ENST00000395963 CCDC85AQ96PX6 553 aaPredicted RBP10.78□□□□□ -0.68
CCR9-203ENST00000395963 EYA3Q99504 573 aa10.78□□□□□ -0.68
CCR9-203ENST00000395963 IL1RAPL2Q9NP60 686 aa10.78□□□□□ -0.68
CCR9-203ENST00000395963 GNL3LQ9NVN8 582 aaKnown RBP10.78□□□□□ -0.68
CCR9-203ENST00000395963 ZNF804BA4D1E1 1349 aa10.77□□□□□ -0.68
CCR9-203ENST00000395963 SNED1Q8TER0 1413 aa10.77□□□□□ -0.69
CCR9-203ENST00000395963 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
CCR9-203ENST00000395963 TTLL6Q8N841 843 aa10.77□□□□□ -0.69
CCR9-203ENST00000395963 RTFDC1Q9BY42 306 aaPredicted RBP10.77□□□□□ -0.69
CCR9-203ENST00000395963 PDGFDQ9GZP0 370 aaPredicted RBP10.77□□□□□ -0.69
CCR9-203ENST00000395963 ARFGEF1Q9Y6D6 1849 aa10.77□□□□□ -0.69
CCR9-203ENST00000395963 HIP1O00291 1037 aa10.77□□□□□ -0.69
CCR9-203ENST00000395963 CAVIN4Q5BKX8 364 aa10.77□□□□□ -0.69
CCR9-203ENST00000395963 RTKN2Q8IZC4 609 aa10.77□□□□□ -0.69
CCR9-203ENST00000395963 DBNLQ9UJU6 430 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms