RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 SPATA32Q96LK8 384 aa10.95□□□□□ -0.66
CDRT1-203ENST00000395667 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 ADCY5O95622 1261 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 IFIT1P09914 478 aaKnown RBP10.94□□□□□ -0.66
CDRT1-203ENST00000395667 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
CDRT1-203ENST00000395667 TPM2P07951 284 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 EVA1CP58658 441 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 GPR108Q9NPR9 543 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 HELLSQ9NRZ9 838 aa10.94□□□□□ -0.66
CDRT1-203ENST00000395667 A0A1B0GUL7 405 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 CCDC192P0DO97 292 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 GORABQ5T7V8 394 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 NUP62CLQ9H1M0 184 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 CEP126Q9P2H0 1117 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
CDRT1-203ENST00000395667 R3HCC1Q9Y3T6 440 aaKnown RBP10.93□□□□□ -0.66
CDRT1-203ENST00000395667 ELP1O95163 1332 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 HMGB1P09429 215 aaKnown RBP10.93□□□□□ -0.66
CDRT1-203ENST00000395667 CAMK4Q16566 473 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 CCDC57Q2TAC2 916 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 PALLDQ8WX93 1383 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 PARP4Q9UKK3 1724 aaKnown RBP10.93□□□□□ -0.66
CDRT1-203ENST00000395667 GLI3P10071 1580 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 LIG1P18858 919 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 CCDC85AQ96PX6 553 aaPredicted RBP10.93□□□□□ -0.66
CDRT1-203ENST00000395667 CARD10Q9BWT7 1032 aa10.93□□□□□ -0.66
CDRT1-203ENST00000395667 PUS3Q9BZE2 481 aaKnown RBP10.93□□□□□ -0.66
CDRT1-203ENST00000395667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDRT1-203ENST00000395667 KDM4AO75164 1064 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDRT1-203ENST00000395667 KIAA2012Q0VF49 1180 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 TAF7LQ5H9L4 462 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 ZMYM1Q5SVZ6 1142 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 STOX1Q6ZVD7 989 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
CDRT1-203ENST00000395667 FUCA2Q9BTY2 467 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
CDRT1-203ENST00000395667 NKX1-1Q15270 411 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-203ENST00000395667 LEO1Q8WVC0 666 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-203ENST00000395667 RNF113AO15541 343 aaKnown RBP10.91□□□□□ -0.66
CDRT1-203ENST00000395667 CIAO1O76071 339 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 FOSBP53539 338 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 SCRN1Q12765 414 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 BICD2Q8TD16 824 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 ZNF830Q96NB3 372 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-203ENST00000395667 TNMDQ9H2S6 317 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 DACT1Q9NYF0 836 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 COL5A2P05997 1499 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-203ENST00000395667 HSPD1P10809 573 aaKnown RBP10.91□□□□□ -0.66
CDRT1-203ENST00000395667 APOBRQ0VD83 1088 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 TTC39AQ5SRH9 613 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 KIF6Q6ZMV9 814 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 ATG3Q9NT62 314 aa10.91□□□□□ -0.66
CDRT1-203ENST00000395667 TCIRG1Q13488 830 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 CKAP2LQ8IYA6 745 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 SLAIN2Q9P270 581 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 KAT6BQ8WYB5 2073 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 KCPQ6ZWJ8 1503 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 MAST3O60307 1309 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 PFKFB2O60825 505 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 CCT2P78371 535 aaKnown RBP10.9□□□□□ -0.66
CDRT1-203ENST00000395667 WASHC4Q2M389 1173 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 LRRFIP1Q32MZ4 808 aaKnown RBP10.9□□□□□ -0.66
CDRT1-203ENST00000395667 KIF3AQ9Y496 699 aa10.9□□□□□ -0.66
CDRT1-203ENST00000395667 E7EWF7 191 aa10.9□□□□□ -0.67
CDRT1-203ENST00000395667 CEBPZQ03701 1054 aaKnown RBP10.9□□□□□ -0.67
CDRT1-203ENST00000395667 RESTQ13127 1097 aa10.9□□□□□ -0.67
CDRT1-203ENST00000395667 FAM89AQ96GI7 184 aa10.9□□□□□ -0.67
CDRT1-203ENST00000395667 LLPHQ9BRT6 129 aaKnown RBP10.9□□□□□ -0.67
CDRT1-203ENST00000395667 ISCA1Q9BUE6 129 aa10.9□□□□□ -0.67
CDRT1-203ENST00000395667 ZSCAN16Q9H4T2 348 aaPredicted RBP10.9□□□□□ -0.67
CDRT1-203ENST00000395667 DDX19AQ9NUU7 478 aaKnown RBP10.9□□□□□ -0.67
CDRT1-203ENST00000395667 AKAP2Q9Y2D5 859 aa10.9□□□□□ -0.67
CDRT1-203ENST00000395667 NUP188Q5SRE5 1749 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 TYRO3Q06418 890 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
CDRT1-203ENST00000395667 CHST3Q7LGC8 479 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 TTC12Q9H892 705 aaPredicted RBP10.89□□□□□ -0.67
CDRT1-203ENST00000395667 CFAP45Q9UL16 551 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 SOS2Q07890 1332 aaPredicted RBP10.89□□□□□ -0.67
CDRT1-203ENST00000395667 TJP1Q07157 1748 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 UBR2Q8IWV8 1755 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 M0R2C6 588 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 ADORA1P30542 326 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 HMGN5P82970 282 aaKnown RBP10.89□□□□□ -0.67
CDRT1-203ENST00000395667 IFIT5Q13325 482 aaKnown RBP10.89□□□□□ -0.67
CDRT1-203ENST00000395667 HSP90AA2PQ14568 343 aaPredicted RBP10.89□□□□□ -0.67
CDRT1-203ENST00000395667 TICAM2Q86XR7 235 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 DNAJC10Q8IXB1 793 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 FAM200AQ8TCP9 573 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
CDRT1-203ENST00000395667 PPFIA3O75145 1194 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms