RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 VIL1P09327 827 aaKnown RBP17.7■□□□□ 0.42
CHCHD2-201ENST00000395422 SULF1Q8IWU6 871 aa17.7■□□□□ 0.42
CHCHD2-201ENST00000395422 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
CHCHD2-201ENST00000395422 HPS5Q9UPZ3 1129 aa17.7■□□□□ 0.42
CHCHD2-201ENST00000395422 ATP5J2-PTCD1G3V325 749 aa17.69■□□□□ 0.42
CHCHD2-201ENST00000395422 RIPK4P57078 832 aa17.69■□□□□ 0.42
CHCHD2-201ENST00000395422 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
CHCHD2-201ENST00000395422 CHPF2Q9P2E5 772 aa17.69■□□□□ 0.42
CHCHD2-201ENST00000395422 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
CHCHD2-201ENST00000395422 ANGEL2Q5VTE6 544 aaKnown RBP17.68■□□□□ 0.42
CHCHD2-201ENST00000395422 EYA3Q99504 573 aa17.68■□□□□ 0.42
CHCHD2-201ENST00000395422 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
CHCHD2-201ENST00000395422 ZNF280AP59817 542 aaPredicted RBP17.67■□□□□ 0.42
CHCHD2-201ENST00000395422 MOB2Q70IA6 237 aa17.67■□□□□ 0.42
CHCHD2-201ENST00000395422 PLBD2Q8NHP8 589 aa17.67■□□□□ 0.42
CHCHD2-201ENST00000395422 SCAF8Q9UPN6 1271 aaKnown RBP17.67■□□□□ 0.42
CHCHD2-201ENST00000395422 RPS8P62241 208 aaKnown RBP17.66■□□□□ 0.42
CHCHD2-201ENST00000395422 SCARF1Q14162 830 aa17.66■□□□□ 0.42
CHCHD2-201ENST00000395422 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
CHCHD2-201ENST00000395422 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
CHCHD2-201ENST00000395422 ANKRD13DQ6ZTN6 518 aa17.65■□□□□ 0.42
CHCHD2-201ENST00000395422 ZNF296Q8WUU4 475 aaPredicted RBP17.65■□□□□ 0.42
CHCHD2-201ENST00000395422 ZC3H12CQ9C0D7 883 aaKnown RBP17.65■□□□□ 0.42
CHCHD2-201ENST00000395422 SEC31BQ9NQW1 1179 aa17.65■□□□□ 0.42
CHCHD2-201ENST00000395422 PODXL2Q9NZ53 605 aa17.65■□□□□ 0.42
CHCHD2-201ENST00000395422 SCN9AQ15858 1988 aa17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 UFL1O94874 794 aa17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 RSBN1LQ6PCB5 846 aaPredicted RBP17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 REM2Q8IYK8 340 aaPredicted RBP17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 ZNF609O15014 1411 aa17.64■□□□□ 0.41
CHCHD2-201ENST00000395422 CHL1O00533 1208 aa17.63■□□□□ 0.41
CHCHD2-201ENST00000395422 FKBP1BP68106 108 aa17.63■□□□□ 0.41
CHCHD2-201ENST00000395422 PRAMEF18Q5VWM3 479 aa17.63■□□□□ 0.41
CHCHD2-201ENST00000395422 GMLQ99445 158 aa17.63■□□□□ 0.41
CHCHD2-201ENST00000395422 MKI67P46013 3256 aaKnown RBP17.62■□□□□ 0.41
CHCHD2-201ENST00000395422 UBE2Q2LH0YL09 131 aa17.62■□□□□ 0.41
CHCHD2-201ENST00000395422 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
CHCHD2-201ENST00000395422 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
CHCHD2-201ENST00000395422 MYOZ2Q9NPC6 264 aa17.62■□□□□ 0.41
CHCHD2-201ENST00000395422 HDAC9Q9UKV0 1011 aa17.62■□□□□ 0.41
CHCHD2-201ENST00000395422 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
CHCHD2-201ENST00000395422 PKN2Q16513 984 aaKnown RBP17.61■□□□□ 0.41
CHCHD2-201ENST00000395422 ANKIB1Q9P2G1 1089 aa17.61■□□□□ 0.41
CHCHD2-201ENST00000395422 GGA1Q9UJY5 639 aa17.61■□□□□ 0.41
CHCHD2-201ENST00000395422 USP17L8P0C7I0 530 aa17.6■□□□□ 0.41
CHCHD2-201ENST00000395422 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
CHCHD2-201ENST00000395422 PITPNM2Q9BZ72 1349 aa17.6■□□□□ 0.41
CHCHD2-201ENST00000395422 PAPPA2Q9BXP8 1791 aa17.6■□□□□ 0.41
CHCHD2-201ENST00000395422 WTIPA6NIX2 430 aaPredicted RBP17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 G3V3G9 751 aa17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 DCAF8Q5TAQ9 597 aa17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 R3HDMLQ9H3Y0 253 aa17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 DBF4Q9UBU7 674 aaPredicted RBP17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
CHCHD2-201ENST00000395422 HTTP42858 3142 aa17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 GPR25O00155 361 aa17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 TM4SF4P48230 202 aa17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 MKRN3Q13064 507 aaKnown RBP17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 TRIM35Q9UPQ4 493 aa17.58■□□□□ 0.4
CHCHD2-201ENST00000395422 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
CHCHD2-201ENST00000395422 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
CHCHD2-201ENST00000395422 MXD3Q9BW11 206 aa17.57■□□□□ 0.4
CHCHD2-201ENST00000395422 USP17L3A6NCW0 530 aa17.56■□□□□ 0.4
CHCHD2-201ENST00000395422 USP17L4A6NCW7 530 aa17.56■□□□□ 0.4
CHCHD2-201ENST00000395422 HOXB7P09629 217 aa17.56■□□□□ 0.4
CHCHD2-201ENST00000395422 FBXO46Q6PJ61 603 aaPredicted RBP17.56■□□□□ 0.4
CHCHD2-201ENST00000395422 USP17L1Q7RTZ2 530 aa17.56■□□□□ 0.4
CHCHD2-201ENST00000395422 HYPKQ9NX55 129 aa17.56■□□□□ 0.4
CHCHD2-201ENST00000395422 NOM1Q5C9Z4 860 aaKnown RBP17.55■□□□□ 0.4
CHCHD2-201ENST00000395422 BRCA2P51587 3418 aa17.55■□□□□ 0.4
CHCHD2-201ENST00000395422 XDHP47989 1333 aa17.54■□□□□ 0.4
CHCHD2-201ENST00000395422 TTLL12Q14166 644 aaPredicted RBP17.54■□□□□ 0.4
CHCHD2-201ENST00000395422 CCDC152Q4G0S7 254 aa17.54■□□□□ 0.4
CHCHD2-201ENST00000395422 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
CHCHD2-201ENST00000395422 PODNQ7Z5L7 613 aa17.54■□□□□ 0.4
CHCHD2-201ENST00000395422 MYD88Q99836 296 aa17.54■□□□□ 0.4
CHCHD2-201ENST00000395422 PHAXQ9H814 394 aaKnown RBP17.54■□□□□ 0.4
CHCHD2-201ENST00000395422 WNT10BO00744 389 aa17.53■□□□□ 0.4
CHCHD2-201ENST00000395422 ATP2B4P23634 1241 aa17.53■□□□□ 0.4
CHCHD2-201ENST00000395422 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
CHCHD2-201ENST00000395422 DACT2Q5SW24 774 aa17.53■□□□□ 0.4
CHCHD2-201ENST00000395422 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
CHCHD2-201ENST00000395422 CFHR5Q9BXR6 569 aa17.53■□□□□ 0.4
CHCHD2-201ENST00000395422 PDE8AO60658 829 aa17.52■□□□□ 0.4
CHCHD2-201ENST00000395422 FKTNO75072 461 aa17.52■□□□□ 0.4
CHCHD2-201ENST00000395422 PCCAP05165 728 aaPredicted RBP17.52■□□□□ 0.4
CHCHD2-201ENST00000395422 ANKRD18AQ8IVF6 992 aa17.52■□□□□ 0.4
CHCHD2-201ENST00000395422 CENPFP49454 3210 aa17.52■□□□□ 0.39
CHCHD2-201ENST00000395422 SASH1O94885 1247 aa17.51■□□□□ 0.39
CHCHD2-201ENST00000395422 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
CHCHD2-201ENST00000395422 PRKG1Q13976 671 aa17.51■□□□□ 0.39
CHCHD2-201ENST00000395422 FZD1Q9UP38 647 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms