RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 RUFY3Q7L099 469 aa17.16■□□□□ 0.34
PPP1CB-203ENST00000395366 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
PPP1CB-203ENST00000395366 KLF18A0A0U1RQI7 1052 aa17.16■□□□□ 0.34
PPP1CB-203ENST00000395366 SH3TC1Q8TE82 1336 aa17.16■□□□□ 0.34
PPP1CB-203ENST00000395366 WDR17Q8IZU2 1322 aa17.16■□□□□ 0.34
PPP1CB-203ENST00000395366 CCDC144CPQ8IYA2 1237 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 C6orf229H3BNL8 230 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 CYP7A1P22680 504 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 CTCFLQ8NI51 663 aaPredicted RBP17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 ZNF287Q9HBT7 754 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 UBE2HP62256 183 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 ZSCAN29Q8IWY8 852 aaPredicted RBP17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
PPP1CB-203ENST00000395366 METAP2P50579 478 aaKnown RBP eCLIP17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 TCEAL9Q9UHQ7 104 aa17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 ESPNB1AK53 854 aa17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 NDUFB9Q9Y6M9 179 aa17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 TPTE2Q6XPS3 522 aa17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 CCDC129Q6ZRS4 1044 aa17.14■□□□□ 0.33
PPP1CB-203ENST00000395366 PDE8AO60658 829 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 CPS1P31327 1500 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 PDILTQ8N807 584 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 MROH1Q8NDA8 1641 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 IPO7O95373 1038 aaKnown RBP17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 F13A1P00488 732 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 PPLO60437 1756 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 XAGE2Q96GT9 111 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 HELLSQ9NRZ9 838 aa17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 PPP1R1BQ9UD71 204 aaPredicted RBP17.13■□□□□ 0.33
PPP1CB-203ENST00000395366 ZSCAN23Q3MJ62 389 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 CKAP2LQ8IYA6 745 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 SPATA31A3Q5VYP0 1347 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 DHX32Q7L7V1 743 aaKnown RBP17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 ZSCAN16Q9H4T2 348 aaPredicted RBP17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 CATIPQ7Z7H3 387 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 KBTBD3Q8NAB2 608 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 LDHCP07864 332 aa17.12■□□□□ 0.33
PPP1CB-203ENST00000395366 SPATA31D1Q6ZQQ2 1576 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 SLC27A2O14975 620 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 SPTY2D1Q68D10 685 aaPredicted RBP17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 OSBPL3Q9H4L5 887 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 TMEM131LA2VDJ0 1609 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 PRC1O43663 620 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 HSPA4P34932 840 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 CEP131Q9UPN4 1083 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 SERPINC1P01008 464 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 STAP2Q9UGK3 403 aa17.11■□□□□ 0.33
PPP1CB-203ENST00000395366 ATP5JP18859 108 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 OVOS2A0A0J9YW53 1432 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 OVOS2Q6IE36 1432 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 GNPATO15228 680 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 KRT23Q9C075 422 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 ZBTB43O43298 467 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 BAG3O95817 575 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 ST5P78524 1137 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 FSIP1Q8NA03 581 aa17.1■□□□□ 0.33
PPP1CB-203ENST00000395366 APOBRQ0VD83 1088 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 MAGEB6Q8N7X4 407 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 TECPR2O15040 1411 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 EPB41L2O43491 1005 aaKnown RBP17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 SYT1P21579 422 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 WTAPQ15007 396 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 DHX37Q8IY37 1157 aaKnown RBP17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 SLC26A6Q9BXS9 759 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 CNNM2Q9H8M5 875 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 DACH1Q9UI36 760 aa17.09■□□□□ 0.33
PPP1CB-203ENST00000395366 TSPY2A6NKD2 308 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms