RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 APLP1P51693 650 aa38.94■■■■□ 3.82
CMTM4-202ENST00000394106 CSF1RP07333 972 aa38.93■■■■□ 3.82
CMTM4-202ENST00000394106 LMOD1P29536 600 aaPredicted RBP38.93■■■■□ 3.82
CMTM4-202ENST00000394106 BSDC1Q9NW68 430 aaPredicted RBP38.93■■■■□ 3.82
CMTM4-202ENST00000394106 RAD17O75943 681 aa38.92■■■■□ 3.82
CMTM4-202ENST00000394106 CT47B1P0C2W7 299 aaPredicted RBP38.92■■■■□ 3.82
CMTM4-202ENST00000394106 IGHMBP2P38935 993 aaKnown RBP38.92■■■■□ 3.82
CMTM4-202ENST00000394106 HNRNPUQ00839 825 aaKnown RBP eCLIP38.92■■■■□ 3.82
CMTM4-202ENST00000394106 DBNDD1Q9H9R9 158 aa38.92■■■■□ 3.82
CMTM4-202ENST00000394106 CEP350Q5VT06 3117 aa38.92■■■■□ 3.82
CMTM4-202ENST00000394106 XDHP47989 1333 aa38.91■■■■□ 3.82
CMTM4-202ENST00000394106 FOXO4P98177 505 aa38.91■■■■□ 3.82
CMTM4-202ENST00000394106 CIAPIN1Q6FI81 312 aa38.91■■■■□ 3.82
CMTM4-202ENST00000394106 CHADLQ6NUI6 762 aa38.91■■■■□ 3.82
CMTM4-202ENST00000394106 CHMP3Q9Y3E7 222 aa38.91■■■■□ 3.82
CMTM4-202ENST00000394106 YDJCA8MPS7 323 aa38.9■■■■□ 3.82
CMTM4-202ENST00000394106 SCNN1DP51172 638 aa38.9■■■■□ 3.82
CMTM4-202ENST00000394106 ZC3H12CQ9C0D7 883 aaKnown RBP38.9■■■■□ 3.82
CMTM4-202ENST00000394106 DOK7Q18PE1 504 aa38.89■■■■□ 3.82
CMTM4-202ENST00000394106 LDHDQ86WU2 507 aa38.89■■■■□ 3.82
CMTM4-202ENST00000394106 MINPP1Q9UNW1 487 aa38.89■■■■□ 3.82
CMTM4-202ENST00000394106 TNIP1Q15025 636 aa38.88■■■■□ 3.81
CMTM4-202ENST00000394106 CLEC11AQ9Y240 323 aa38.88■■■■□ 3.81
CMTM4-202ENST00000394106 ANKRD18BA2A2Z9 1011 aa38.87■■■■□ 3.81
CMTM4-202ENST00000394106 EPS15P42566 896 aa38.87■■■■□ 3.81
CMTM4-202ENST00000394106 EPHA10Q5JZY3 1008 aa38.87■■■■□ 3.81
CMTM4-202ENST00000394106 PNMA8AQ86V59 439 aaPredicted RBP38.87■■■■□ 3.81
CMTM4-202ENST00000394106 MPHOSPH8Q99549 860 aa38.87■■■■□ 3.81
CMTM4-202ENST00000394106 ECE2O60344 883 aa38.86■■■■□ 3.81
CMTM4-202ENST00000394106 G3V3G9 751 aa38.85■■■■□ 3.81
CMTM4-202ENST00000394106 ATP2B4P23634 1241 aa38.85■■■■□ 3.81
CMTM4-202ENST00000394106 GMPSP49915 693 aaPredicted RBP38.85■■■■□ 3.81
CMTM4-202ENST00000394106 DCAF8Q5TAQ9 597 aa38.85■■■■□ 3.81
CMTM4-202ENST00000394106 LMBR1LQ6UX01 489 aa38.85■■■■□ 3.81
CMTM4-202ENST00000394106 IFIT5Q13325 482 aaKnown RBP38.84■■■■□ 3.81
CMTM4-202ENST00000394106 HTRA3P83110 453 aa38.83■■■■□ 3.81
CMTM4-202ENST00000394106 NBPF7P0C2Y1 421 aaPredicted RBP38.82■■■■□ 3.8
CMTM4-202ENST00000394106 SUCLG2Q96I99 432 aa38.82■■■■□ 3.8
CMTM4-202ENST00000394106 GPRC5DQ9NZD1 345 aa38.82■■■■□ 3.8
CMTM4-202ENST00000394106 ADAMTSL1Q8N6G6 1762 aa38.81■■■■□ 3.8
CMTM4-202ENST00000394106 NOB1Q9ULX3 412 aaKnown RBP38.81■■■■□ 3.8
CMTM4-202ENST00000394106 WTIPA6NIX2 430 aaPredicted RBP38.8■■■■□ 3.8
CMTM4-202ENST00000394106 KCNQ5Q9NR82 932 aa38.8■■■■□ 3.8
CMTM4-202ENST00000394106 PSMD14O00487 310 aa38.79■■■■□ 3.8
CMTM4-202ENST00000394106 CCT4P50991 539 aaKnown RBP38.79■■■■□ 3.8
CMTM4-202ENST00000394106 RARSP54136 660 aaKnown RBP38.79■■■■□ 3.8
CMTM4-202ENST00000394106 CCDC57Q2TAC2 916 aa38.78■■■■□ 3.8
CMTM4-202ENST00000394106 UTYO14607 1347 aa38.78■■■■□ 3.8
CMTM4-202ENST00000394106 ANKRD2Q9GZV1 360 aa38.77■■■■□ 3.8
CMTM4-202ENST00000394106 ZBTB12Q9Y330 459 aaPredicted RBP38.77■■■■□ 3.8
CMTM4-202ENST00000394106 TAF7LQ5H9L4 462 aa38.76■■■■□ 3.8
CMTM4-202ENST00000394106 KAZALD1Q96I82 304 aa38.76■■■■□ 3.8
CMTM4-202ENST00000394106 CHRNDQ07001 517 aa38.75■■■■□ 3.79
CMTM4-202ENST00000394106 MAP1SQ66K74 1059 aaPredicted RBP38.75■■■■□ 3.79
CMTM4-202ENST00000394106 USP50Q70EL3 339 aaPredicted RBP38.75■■■■□ 3.79
CMTM4-202ENST00000394106 ZNF594Q96JF6 807 aaPredicted RBP38.75■■■■□ 3.79
CMTM4-202ENST00000394106 ADARB2Q9NS39 739 aaKnown RBP38.75■■■■□ 3.79
CMTM4-202ENST00000394106 SCN9AQ15858 1988 aa38.75■■■■□ 3.79
CMTM4-202ENST00000394106 BRPF1P55201 1214 aaPredicted RBP38.74■■■■□ 3.79
CMTM4-202ENST00000394106 LEMD3Q9Y2U8 911 aa38.74■■■■□ 3.79
CMTM4-202ENST00000394106 MED23Q9ULK4 1368 aa38.73■■■■□ 3.79
CMTM4-202ENST00000394106 API5Q9BZZ5 524 aaKnown RBP38.72■■■■□ 3.79
CMTM4-202ENST00000394106 USP44Q9H0E7 712 aa38.72■■■■□ 3.79
CMTM4-202ENST00000394106 BICC1Q9H694 974 aaKnown RBP38.72■■■■□ 3.79
CMTM4-202ENST00000394106 CNOT7Q9UIV1 285 aaKnown RBP38.72■■■■□ 3.79
CMTM4-202ENST00000394106 ZNF804BA4D1E1 1349 aa38.71■■■■□ 3.79
CMTM4-202ENST00000394106 KCNJ4P48050 445 aa38.71■■■■□ 3.79
CMTM4-202ENST00000394106 SHTN1A0MZ66 631 aa38.7■■■■□ 3.79
CMTM4-202ENST00000394106 MICALL2Q8IY33 904 aa38.7■■■■□ 3.79
CMTM4-202ENST00000394106 CNTROBQ8N137 903 aa38.7■■■■□ 3.79
CMTM4-202ENST00000394106 HELBQ8NG08 1087 aaPredicted RBP38.7■■■■□ 3.79
CMTM4-202ENST00000394106 KIF16BQ96L93 1317 aa38.69■■■■□ 3.78
CMTM4-202ENST00000394106 ITGBL1O95965 494 aaPredicted RBP38.69■■■■□ 3.78
CMTM4-202ENST00000394106 LDHAL6AQ6ZMR3 332 aa38.69■■■■□ 3.78
CMTM4-202ENST00000394106 DNAJC5GQ8N7S2 189 aa38.69■■■■□ 3.78
CMTM4-202ENST00000394106 TAF5LO75529 589 aa38.68■■■■□ 3.78
CMTM4-202ENST00000394106 DPF2Q92785 391 aa38.68■■■■□ 3.78
CMTM4-202ENST00000394106 CNNM1Q9NRU3 951 aa38.68■■■■□ 3.78
CMTM4-202ENST00000394106 A0A1B0GUL6 1792 aa38.67■■■■□ 3.78
CMTM4-202ENST00000394106 PASKQ96RG2 1323 aa38.67■■■■□ 3.78
CMTM4-202ENST00000394106 H7C1D1 291 aa38.67■■■■□ 3.78
CMTM4-202ENST00000394106 RPS12P25398 132 aaKnown RBP38.67■■■■□ 3.78
CMTM4-202ENST00000394106 TXNRD3Q86VQ6 643 aa38.67■■■■□ 3.78
CMTM4-202ENST00000394106 VIL1P09327 827 aaKnown RBP38.66■■■■□ 3.78
CMTM4-202ENST00000394106 KLRK1P26718 216 aa38.66■■■■□ 3.78
CMTM4-202ENST00000394106 PODNQ7Z5L7 613 aa38.66■■■■□ 3.78
CMTM4-202ENST00000394106 ANKRD44Q8N8A2 993 aa38.66■■■■□ 3.78
CMTM4-202ENST00000394106 RABL6Q3YEC7 729 aaPredicted RBP38.65■■■■□ 3.78
CMTM4-202ENST00000394106 TRPM4Q8TD43 1214 aa38.65■■■■□ 3.78
CMTM4-202ENST00000394106 PSME4Q14997 1843 aa38.64■■■■□ 3.78
CMTM4-202ENST00000394106 ZBED9Q6R2W3 1325 aa38.63■■■■□ 3.78
CMTM4-202ENST00000394106 SNAP23O00161 211 aa38.63■■■■□ 3.77
CMTM4-202ENST00000394106 PLIN1O60240 522 aa38.63■■■■□ 3.77
CMTM4-202ENST00000394106 BCAR3O75815 825 aa38.62■■■■□ 3.77
CMTM4-202ENST00000394106 ARHGAP45Q92619 1136 aa38.62■■■■□ 3.77
CMTM4-202ENST00000394106 COA1Q9GZY4 146 aa38.62■■■■□ 3.77
CMTM4-202ENST00000394106 USP17L3A6NCW0 530 aa38.61■■■■□ 3.77
CMTM4-202ENST00000394106 USP17L4A6NCW7 530 aa38.61■■■■□ 3.77
CMTM4-202ENST00000394106 HIRAP54198 1017 aaPredicted RBP38.61■■■■□ 3.77
CMTM4-202ENST00000394106 RSBN1LQ6PCB5 846 aaPredicted RBP38.61■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms