RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 CCDC83Q8IWF9 413 aa28.09■■■□□ 2.09
PICALM-202ENST00000393346 TBC1D2BQ9UPU7 963 aa28.09■■■□□ 2.09
PICALM-202ENST00000393346 H7C1W4 665 aa28.08■■■□□ 2.09
PICALM-202ENST00000393346 HIP1O00291 1037 aa28.08■■■□□ 2.09
PICALM-202ENST00000393346 ONECUT3O60422 494 aaPredicted RBP28.08■■■□□ 2.09
PICALM-202ENST00000393346 HLFQ16534 295 aa28.08■■■□□ 2.09
PICALM-202ENST00000393346 SEPT12Q8IYM1 358 aa28.08■■■□□ 2.09
PICALM-202ENST00000393346 R3HCC1Q9Y3T6 440 aaKnown RBP28.08■■■□□ 2.09
PICALM-202ENST00000393346 INTS5Q6P9B9 1019 aaKnown RBP28.08■■■□□ 2.09
PICALM-202ENST00000393346 CCDC87Q9NVE4 849 aa28.08■■■□□ 2.09
PICALM-202ENST00000393346 BTAF1O14981 1849 aa28.08■■■□□ 2.08
PICALM-202ENST00000393346 ZKSCAN1P17029 563 aaPredicted RBP28.07■■■□□ 2.08
PICALM-202ENST00000393346 GIGYF2Q6Y7W6 1299 aaKnown RBP28.07■■■□□ 2.08
PICALM-202ENST00000393346 ISCA1Q9BUE6 129 aa28.07■■■□□ 2.08
PICALM-202ENST00000393346 PTMAP06454 111 aaKnown RBP28.07■■■□□ 2.08
PICALM-202ENST00000393346 DZIP3Q86Y13 1208 aaKnown RBP28.07■■■□□ 2.08
PICALM-202ENST00000393346 MTMR6Q9Y217 621 aa28.07■■■□□ 2.08
PICALM-202ENST00000393346 SASH1O94885 1247 aa28.06■■■□□ 2.08
PICALM-202ENST00000393346 KLHDC4Q8TBB5 520 aa28.06■■■□□ 2.08
PICALM-202ENST00000393346 KCNQ4P56696 695 aa28.06■■■□□ 2.08
PICALM-202ENST00000393346 G3BP1Q13283 466 aaKnown RBP eCLIP28.06■■■□□ 2.08
PICALM-202ENST00000393346 MAP4K1Q92918 833 aa28.05■■■□□ 2.08
PICALM-202ENST00000393346 SIL1Q9H173 461 aa28.05■■■□□ 2.08
PICALM-202ENST00000393346 SNRKQ9NRH2 765 aa28.05■■■□□ 2.08
PICALM-202ENST00000393346 RBM8AQ9Y5S9 174 aaKnown RBP28.05■■■□□ 2.08
PICALM-202ENST00000393346 FIBPO43427 364 aa28.04■■■□□ 2.08
PICALM-202ENST00000393346 EIF5P55010 431 aaKnown RBP28.04■■■□□ 2.08
PICALM-202ENST00000393346 EAF2Q96CJ1 260 aaPredicted RBP28.04■■■□□ 2.08
PICALM-202ENST00000393346 SBF2Q86WG5 1849 aa28.04■■■□□ 2.08
PICALM-202ENST00000393346 CREB3L3Q68CJ9 461 aa28.04■■■□□ 2.08
PICALM-202ENST00000393346 GPTP24298 496 aa28.03■■■□□ 2.08
PICALM-202ENST00000393346 RABL6Q3YEC7 729 aaPredicted RBP28.03■■■□□ 2.08
PICALM-202ENST00000393346 COL15A1P39059 1388 aa28.03■■■□□ 2.08
PICALM-202ENST00000393346 ME3Q16798 604 aa28.03■■■□□ 2.08
PICALM-202ENST00000393346 GLIPR1L2Q4G1C9 344 aa28.03■■■□□ 2.08
PICALM-202ENST00000393346 COL5A3P25940 1745 aaPredicted RBP28.02■■■□□ 2.08
PICALM-202ENST00000393346 ST3GAL1Q11201 340 aa28.02■■■□□ 2.08
PICALM-202ENST00000393346 TRIM28Q13263 835 aaKnown RBP28.02■■■□□ 2.08
PICALM-202ENST00000393346 NMIQ13287 307 aaPredicted RBP28.02■■■□□ 2.08
PICALM-202ENST00000393346 LMBR1LQ6UX01 489 aa28.02■■■□□ 2.08
PICALM-202ENST00000393346 NHSQ6T4R5 1651 aa28.02■■■□□ 2.08
PICALM-202ENST00000393346 CICQ96RK0 1608 aaPredicted RBP28.02■■■□□ 2.08
PICALM-202ENST00000393346 ANKRD36CQ5JPF3 1778 aa28.02■■■□□ 2.08
PICALM-202ENST00000393346 FAM227BQ96M60 508 aa28.02■■■□□ 2.08
PICALM-202ENST00000393346 CHMP3Q9Y3E7 222 aa28.02■■■□□ 2.08
PICALM-202ENST00000393346 PDIA4P13667 645 aaKnown RBP28.01■■■□□ 2.07
PICALM-202ENST00000393346 DNM1Q05193 864 aaKnown RBP28.01■■■□□ 2.07
PICALM-202ENST00000393346 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.01■■■□□ 2.076e-8■■■□□ 19
PICALM-202ENST00000393346 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.01■■■□□ 2.07
PICALM-202ENST00000393346 PSMA5P28066 241 aa28.01■■■□□ 2.07
PICALM-202ENST00000393346 KCNJ4P48050 445 aa28.01■■■□□ 2.07
PICALM-202ENST00000393346 FOXO4P98177 505 aa28.01■■■□□ 2.07
PICALM-202ENST00000393346 HSP90AB3PQ58FF7 597 aa28■■■□□ 2.07
PICALM-202ENST00000393346 FAM89AQ96GI7 184 aa28■■■□□ 2.07
PICALM-202ENST00000393346 CCDC8Q9H0W5 538 aaPredicted RBP28■■■□□ 2.07
PICALM-202ENST00000393346 HCLS1P14317 486 aaPredicted RBP28■■■□□ 2.07
PICALM-202ENST00000393346 USP25Q9UHP3 1055 aa28■■■□□ 2.07
PICALM-202ENST00000393346 ERVV-1B6SEH8 477 aa27.99■■■□□ 2.07
PICALM-202ENST00000393346 SLC27A2O14975 620 aa27.99■■■□□ 2.07
PICALM-202ENST00000393346 KIAA2012Q0VF49 1180 aa27.99■■■□□ 2.07
PICALM-202ENST00000393346 TPCN1Q9ULQ1 816 aa27.99■■■□□ 2.07
PICALM-202ENST00000393346 ZNF831Q5JPB2 1677 aa27.98■■■□□ 2.07
PICALM-202ENST00000393346 LINC00116Q8NCU8 138 aa27.98■■■□□ 2.07
PICALM-202ENST00000393346 FUCA2Q9BTY2 467 aa27.98■■■□□ 2.07
PICALM-202ENST00000393346 PDCL3Q9H2J4 239 aa27.98■■■□□ 2.07
PICALM-202ENST00000393346 RREB1Q92766 1687 aa27.98■■■□□ 2.07
PICALM-202ENST00000393346 PTPN12Q05209 780 aaKnown RBP27.97■■■□□ 2.07
PICALM-202ENST00000393346 TPRNQ4KMQ1 711 aa27.97■■■□□ 2.07
PICALM-202ENST00000393346 NLRP10Q86W26 655 aa27.97■■■□□ 2.07
PICALM-202ENST00000393346 NECAB1Q8N987 351 aa27.97■■■□□ 2.07
PICALM-202ENST00000393346 VPS37CA5D8V6 355 aaPredicted RBP27.97■■■□□ 2.07
PICALM-202ENST00000393346 RFX5P48382 616 aaPredicted RBP27.97■■■□□ 2.07
PICALM-202ENST00000393346 RNF20Q5VTR2 975 aa27.97■■■□□ 2.07
PICALM-202ENST00000393346 TLR7Q9NYK1 1049 aaKnown RBP27.97■■■□□ 2.07
PICALM-202ENST00000393346 ADCY5O95622 1261 aa27.96■■■□□ 2.07
PICALM-202ENST00000393346 ZBTB38Q8NAP3 1195 aaPredicted RBP27.96■■■□□ 2.07
PICALM-202ENST00000393346 ALDH8A1Q9H2A2 487 aaPredicted RBP27.96■■■□□ 2.07
PICALM-202ENST00000393346 COPRSQ9NQ92 184 aa27.96■■■□□ 2.07
PICALM-202ENST00000393346 BRWD3Q6RI45 1802 aa27.96■■■□□ 2.07
PICALM-202ENST00000393346 BOLA2Q9H3K6 86 aa27.96■■■□□ 2.07
PICALM-202ENST00000393346 A0A0D9SFI3 127 aa27.95■■■□□ 2.07
PICALM-202ENST00000393346 PCCAP05165 728 aaPredicted RBP27.95■■■□□ 2.07
PICALM-202ENST00000393346 ANKRD1Q15327 319 aa27.95■■■□□ 2.07
PICALM-202ENST00000393346 FSD1Q9BTV5 496 aa27.95■■■□□ 2.07
PICALM-202ENST00000393346 LARP1BQ659C4 914 aaKnown RBP27.95■■■□□ 2.06
PICALM-202ENST00000393346 SYNE4Q8N205 404 aa27.95■■■□□ 2.06
PICALM-202ENST00000393346 MED23Q9ULK4 1368 aa27.94■■■□□ 2.06
PICALM-202ENST00000393346 UQCRHLA0A096LP55 91 aa27.94■■■□□ 2.06
PICALM-202ENST00000393346 KDM4AO75164 1064 aa27.94■■■□□ 2.06
PICALM-202ENST00000393346 UQCRHP07919 91 aa27.94■■■□□ 2.06
PICALM-202ENST00000393346 GIMAP6Q6P9H5 292 aa27.94■■■□□ 2.06
PICALM-202ENST00000393346 DTNBO60941 627 aa27.93■■■□□ 2.06
PICALM-202ENST00000393346 BLOC1S2Q6QNY1 142 aa27.93■■■□□ 2.06
PICALM-202ENST00000393346 SASS6Q6UVJ0 657 aa27.93■■■□□ 2.06
PICALM-202ENST00000393346 PDCP20941 246 aa27.93■■■□□ 2.06
PICALM-202ENST00000393346 UBN2Q6ZU65 1347 aa27.92■■■□□ 2.06
PICALM-202ENST00000393346 TRMT112Q9UI30 125 aaKnown RBP27.92■■■□□ 2.06
PICALM-202ENST00000393346 CCNL1Q9UK58 526 aaPredicted RBP27.92■■■□□ 2.06
PICALM-202ENST00000393346 RPS6KB1P23443 525 aa27.91■■■□□ 2.06
PICALM-202ENST00000393346 TSGA10IPQ3SY00 556 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms