RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CC2D2BQ6DHV5 1058 aa16.79■□□□□ 0.28
PTN-202ENST00000393083 SP8Q8IXZ3 490 aa16.79■□□□□ 0.28
PTN-202ENST00000393083 PRELPP51888 382 aa16.78■□□□□ 0.28
PTN-202ENST00000393083 FAM161AQ3B820 660 aa16.78■□□□□ 0.28
PTN-202ENST00000393083 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
PTN-202ENST00000393083 LMBR1LQ6UX01 489 aa16.78■□□□□ 0.28
PTN-202ENST00000393083 TMC4Q7Z404 712 aa16.78■□□□□ 0.28
PTN-202ENST00000393083 ITGA6P23229 1130 aa16.77■□□□□ 0.28
PTN-202ENST00000393083 RASSF7Q02833 373 aa16.77■□□□□ 0.28
PTN-202ENST00000393083 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.28
PTN-202ENST00000393083 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
PTN-202ENST00000393083 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.28
PTN-202ENST00000393083 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
PTN-202ENST00000393083 FER1L6Q2WGJ9 1857 aa16.77■□□□□ 0.28
PTN-202ENST00000393083 LTBP3Q9NS15 1303 aa16.77■□□□□ 0.28
PTN-202ENST00000393083 SRGAP3O43295 1099 aa16.77■□□□□ 0.27
PTN-202ENST00000393083 POLA2Q14181 598 aa16.77■□□□□ 0.27
PTN-202ENST00000393083 CDC5LQ99459 802 aaKnown RBP16.77■□□□□ 0.27
PTN-202ENST00000393083 MTX1Q13505 466 aa16.76■□□□□ 0.27
PTN-202ENST00000393083 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
PTN-202ENST00000393083 ANKRD18AQ8IVF6 992 aa16.76■□□□□ 0.27
PTN-202ENST00000393083 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
PTN-202ENST00000393083 APBB1O00213 710 aa16.75■□□□□ 0.27
PTN-202ENST00000393083 FKBP4Q02790 459 aaKnown RBP eCLIP16.75■□□□□ 0.27
PTN-202ENST00000393083 PSMD1Q99460 953 aa16.75■□□□□ 0.27
PTN-202ENST00000393083 TAOK3Q9H2K8 898 aa16.75■□□□□ 0.27
PTN-202ENST00000393083 LRRC37AA6NMS7 1700 aa16.74■□□□□ 0.27
PTN-202ENST00000393083 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
PTN-202ENST00000393083 IFIT5Q13325 482 aaKnown RBP16.74■□□□□ 0.27
PTN-202ENST00000393083 BSDC1Q9NW68 430 aaPredicted RBP16.74■□□□□ 0.27
PTN-202ENST00000393083 CHD4Q14839 1912 aa16.74■□□□□ 0.27
PTN-202ENST00000393083 LMNB1P20700 586 aa16.73■□□□□ 0.27
PTN-202ENST00000393083 C9orf131Q5VYM1 1079 aa16.73■□□□□ 0.27
PTN-202ENST00000393083 RTFDC1Q9BY42 306 aaPredicted RBP16.73■□□□□ 0.27
PTN-202ENST00000393083 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
PTN-202ENST00000393083 CHMP3Q9Y3E7 222 aa16.73■□□□□ 0.27
PTN-202ENST00000393083 SBF1O95248 1867 aa16.73■□□□□ 0.27
PTN-202ENST00000393083 SMARCA5O60264 1052 aaPredicted RBP16.72■□□□□ 0.27
PTN-202ENST00000393083 CCDC57Q2TAC2 916 aa16.72■□□□□ 0.27
PTN-202ENST00000393083 IGHMBP2P38935 993 aaKnown RBP16.72■□□□□ 0.27
PTN-202ENST00000393083 GPSM2P81274 684 aa16.72■□□□□ 0.27
PTN-202ENST00000393083 MPNDQ8N594 471 aa16.72■□□□□ 0.27
PTN-202ENST00000393083 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
PTN-202ENST00000393083 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
PTN-202ENST00000393083 SURF6O75683 361 aaKnown RBP16.71■□□□□ 0.27
PTN-202ENST00000393083 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
PTN-202ENST00000393083 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
PTN-202ENST00000393083 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
PTN-202ENST00000393083 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
PTN-202ENST00000393083 PODXL2Q9NZ53 605 aa16.71■□□□□ 0.27
PTN-202ENST00000393083 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
PTN-202ENST00000393083 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.27
PTN-202ENST00000393083 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
PTN-202ENST00000393083 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
PTN-202ENST00000393083 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
PTN-202ENST00000393083 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
PTN-202ENST00000393083 RBM19Q9Y4C8 960 aaKnown RBP16.7■□□□□ 0.26
PTN-202ENST00000393083 LTBP1Q14766 1721 aa16.7■□□□□ 0.26
PTN-202ENST00000393083 RAB11FIP3O75154 756 aa16.69■□□□□ 0.26
PTN-202ENST00000393083 YY1P25490 414 aa16.69■□□□□ 0.26
PTN-202ENST00000393083 HSP90AB4PQ58FF6 505 aa16.69■□□□□ 0.26
PTN-202ENST00000393083 MPHOSPH8Q99549 860 aa16.69■□□□□ 0.26
PTN-202ENST00000393083 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
PTN-202ENST00000393083 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
PTN-202ENST00000393083 AK9Q5TCS8 1911 aa16.68■□□□□ 0.26
PTN-202ENST00000393083 OS9Q13438 667 aaPredicted RBP16.68■□□□□ 0.26
PTN-202ENST00000393083 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
PTN-202ENST00000393083 PLEKHM2Q8IWE5 1019 aa16.68■□□□□ 0.26
PTN-202ENST00000393083 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
PTN-202ENST00000393083 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
PTN-202ENST00000393083 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
PTN-202ENST00000393083 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
PTN-202ENST00000393083 PA2G4Q9UQ80 394 aaKnown RBP16.68■□□□□ 0.26
PTN-202ENST00000393083 NOP58Q9Y2X3 529 aaKnown RBP16.68■□□□□ 0.26
PTN-202ENST00000393083 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 XDHP47989 1333 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 COL4A5P29400 1685 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 WTIPA6NIX2 430 aaPredicted RBP16.67■□□□□ 0.26
PTN-202ENST00000393083 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
PTN-202ENST00000393083 TAF7LQ5H9L4 462 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 KLHDC4Q8TBB5 520 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 OTUD7AQ8TE49 926 aaPredicted RBP16.67■□□□□ 0.26
PTN-202ENST00000393083 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 PUS3Q9BZE2 481 aaKnown RBP16.67■□□□□ 0.26
PTN-202ENST00000393083 ANKIB1Q9P2G1 1089 aa16.67■□□□□ 0.26
PTN-202ENST00000393083 CHRNDQ07001 517 aa16.66■□□□□ 0.26
PTN-202ENST00000393083 AOC3Q16853 763 aa16.66■□□□□ 0.26
PTN-202ENST00000393083 RHPN1Q8TCX5 695 aa16.66■□□□□ 0.26
PTN-202ENST00000393083 GGA1Q9UJY5 639 aa16.66■□□□□ 0.26
PTN-202ENST00000393083 RIPOR2Q9Y4F9 1068 aa16.66■□□□□ 0.26
PTN-202ENST00000393083 ZC3H4Q9UPT8 1303 aaKnown RBP16.65■□□□□ 0.26
PTN-202ENST00000393083 ATP2B4P23634 1241 aa16.65■□□□□ 0.26
PTN-202ENST00000393083 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
PTN-202ENST00000393083 LRRC24Q50LG9 513 aa16.65■□□□□ 0.26
PTN-202ENST00000393083 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
PTN-202ENST00000393083 ANKRD2Q9GZV1 360 aa16.65■□□□□ 0.26
PTN-202ENST00000393083 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
PTN-202ENST00000393083 CNNM1Q9NRU3 951 aa16.65■□□□□ 0.26
PTN-202ENST00000393083 DICER1Q9UPY3 1922 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms