RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 KLHDC4Q8TBB5 520 aa18.57■□□□□ 0.56
SUMO1-203ENST00000392246 SSH3Q8TE77 659 aa18.57■□□□□ 0.56
SUMO1-203ENST00000392246 COPRSQ9NQ92 184 aa18.57■□□□□ 0.56
SUMO1-203ENST00000392246 POLA2Q14181 598 aa18.56■□□□□ 0.56
SUMO1-203ENST00000392246 DPP8Q6V1X1 898 aaPredicted RBP18.56■□□□□ 0.56
SUMO1-203ENST00000392246 ANKIB1Q9P2G1 1089 aa18.56■□□□□ 0.56
SUMO1-203ENST00000392246 FBXO3Q9UK99 471 aa18.56■□□□□ 0.56
SUMO1-203ENST00000392246 NSFL1CQ9UNZ2 370 aaKnown RBP18.56■□□□□ 0.56
SUMO1-203ENST00000392246 SNED1Q8TER0 1413 aa18.56■□□□□ 0.56
SUMO1-203ENST00000392246 GPSM2P81274 684 aa18.55■□□□□ 0.56
SUMO1-203ENST00000392246 PSMD1Q99460 953 aa18.55■□□□□ 0.56
SUMO1-203ENST00000392246 PUS3Q9BZE2 481 aaKnown RBP18.55■□□□□ 0.56
SUMO1-203ENST00000392246 ANKRD2Q9GZV1 360 aa18.55■□□□□ 0.56
SUMO1-203ENST00000392246 TAOK3Q9H2K8 898 aa18.55■□□□□ 0.56
SUMO1-203ENST00000392246 PODXL2Q9NZ53 605 aa18.55■□□□□ 0.56
SUMO1-203ENST00000392246 RIPOR2Q9Y4F9 1068 aa18.55■□□□□ 0.56
SUMO1-203ENST00000392246 LTBP3Q9NS15 1303 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 EYA2O00167 538 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 NFKBIEO00221 500 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
SUMO1-203ENST00000392246 FKBP4Q02790 459 aaKnown RBP eCLIP18.54■□□□□ 0.56
SUMO1-203ENST00000392246 CHRNDQ07001 517 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 PA2G4Q9UQ80 394 aaKnown RBP18.54■□□□□ 0.56
SUMO1-203ENST00000392246 UTRNP46939 3433 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 XDHP47989 1333 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 HMMRO75330 724 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 CIAO1O76071 339 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 LRRC24Q50LG9 513 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 SUPT20HQ8NEM7 779 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 RTFDC1Q9BY42 306 aaPredicted RBP18.54■□□□□ 0.56
SUMO1-203ENST00000392246 SIL1Q9H173 461 aa18.54■□□□□ 0.56
SUMO1-203ENST00000392246 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
SUMO1-203ENST00000392246 GGA1Q9UJY5 639 aa18.53■□□□□ 0.56
SUMO1-203ENST00000392246 SBF1O95248 1867 aa18.52■□□□□ 0.56
SUMO1-203ENST00000392246 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.56
SUMO1-203ENST00000392246 ATP2B4P23634 1241 aa18.52■□□□□ 0.56
SUMO1-203ENST00000392246 RASSF7Q02833 373 aa18.52■□□□□ 0.56
SUMO1-203ENST00000392246 SIRT2Q8IXJ6 389 aa18.52■□□□□ 0.56
SUMO1-203ENST00000392246 LTBP1Q14766 1721 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 C6orf229H3BNL8 230 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 IL15P40933 162 aaPredicted RBP18.51■□□□□ 0.55
SUMO1-203ENST00000392246 G3BP1Q13283 466 aaKnown RBP eCLIP18.51■□□□□ 0.55
SUMO1-203ENST00000392246 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 ATG9AQ7Z3C6 839 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 TBC1D16Q8TBP0 767 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 POLLQ9UGP5 575 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 LEMD3Q9Y2U8 911 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 PCDHB15Q9Y5E8 787 aa18.51■□□□□ 0.55
SUMO1-203ENST00000392246 A0A1B0GUL6 1792 aa18.5■□□□□ 0.55
SUMO1-203ENST00000392246 TAF5LO75529 589 aa18.5■□□□□ 0.55
SUMO1-203ENST00000392246 SURF6O75683 361 aaKnown RBP18.5■□□□□ 0.55
SUMO1-203ENST00000392246 UFL1O94874 794 aa18.5■□□□□ 0.55
SUMO1-203ENST00000392246 HELBQ8NG08 1087 aaPredicted RBP18.5■□□□□ 0.55
SUMO1-203ENST00000392246 VPS33BQ9H267 617 aa18.5■□□□□ 0.55
SUMO1-203ENST00000392246 ZNF277Q9NRM2 450 aaPredicted RBP18.5■□□□□ 0.55
SUMO1-203ENST00000392246 NOP58Q9Y2X3 529 aaKnown RBP18.5■□□□□ 0.55
SUMO1-203ENST00000392246 LMNB1P20700 586 aa18.49■□□□□ 0.55
SUMO1-203ENST00000392246 EYA3Q99504 573 aa18.49■□□□□ 0.55
SUMO1-203ENST00000392246 DUOX1Q9NRD9 1551 aa18.49■□□□□ 0.55
SUMO1-203ENST00000392246 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
SUMO1-203ENST00000392246 PDE8BO95263 885 aa18.49■□□□□ 0.55
SUMO1-203ENST00000392246 KCNJ4P48050 445 aa18.49■□□□□ 0.55
SUMO1-203ENST00000392246 CEP126Q9P2H0 1117 aa18.49■□□□□ 0.55
SUMO1-203ENST00000392246 CHD4Q14839 1912 aa18.48■□□□□ 0.55
SUMO1-203ENST00000392246 IARSP41252 1262 aaKnown RBP18.48■□□□□ 0.55
SUMO1-203ENST00000392246 OS9Q13438 667 aaPredicted RBP18.48■□□□□ 0.55
SUMO1-203ENST00000392246 WASHC4Q2M389 1173 aa18.48■□□□□ 0.55
SUMO1-203ENST00000392246 VGLL2Q8N8G2 317 aa18.48■□□□□ 0.55
SUMO1-203ENST00000392246 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
SUMO1-203ENST00000392246 PPIP5K2O43314 1243 aa18.47■□□□□ 0.55
SUMO1-203ENST00000392246 PRELPP51888 382 aa18.47■□□□□ 0.55
SUMO1-203ENST00000392246 UBE4AQ14139 1066 aa18.47■□□□□ 0.55
SUMO1-203ENST00000392246 HSP90AB4PQ58FF6 505 aa18.47■□□□□ 0.55
SUMO1-203ENST00000392246 ZC3H12CQ9C0D7 883 aaKnown RBP18.47■□□□□ 0.55
SUMO1-203ENST00000392246 WTIPA6NIX2 430 aaPredicted RBP18.46■□□□□ 0.55
SUMO1-203ENST00000392246 NEFLP07196 543 aa18.46■□□□□ 0.55
SUMO1-203ENST00000392246 KIAA2012Q0VF49 1180 aa18.46■□□□□ 0.55
SUMO1-203ENST00000392246 C9orf131Q5VYM1 1079 aa18.46■□□□□ 0.55
SUMO1-203ENST00000392246 SNAP23O00161 211 aa18.45■□□□□ 0.54
SUMO1-203ENST00000392246 RIMBP2O15034 1052 aa18.45■□□□□ 0.54
SUMO1-203ENST00000392246 AOC3Q16853 763 aa18.45■□□□□ 0.54
SUMO1-203ENST00000392246 LARGE2Q8N3Y3 721 aa18.45■□□□□ 0.54
SUMO1-203ENST00000392246 GPR101Q96P66 508 aaPredicted RBP18.45■□□□□ 0.54
SUMO1-203ENST00000392246 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
SUMO1-203ENST00000392246 EXOC6BQ9Y2D4 811 aa18.45■□□□□ 0.54
SUMO1-203ENST00000392246 SASH1O94885 1247 aa18.44■□□□□ 0.54
SUMO1-203ENST00000392246 TFCP2Q12800 502 aa18.44■□□□□ 0.54
SUMO1-203ENST00000392246 PUM3Q15397 648 aaKnown RBP18.44■□□□□ 0.54
SUMO1-203ENST00000392246 ERC1Q8IUD2 1116 aa18.44■□□□□ 0.54
SUMO1-203ENST00000392246 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
SUMO1-203ENST00000392246 MED23Q9ULK4 1368 aa18.44■□□□□ 0.54
SUMO1-203ENST00000392246 C15orf52Q6ZUT6 534 aaKnown RBP18.44■□□□□ 0.54
SUMO1-203ENST00000392246 AKAP2Q9Y2D5 859 aa18.44■□□□□ 0.54
SUMO1-203ENST00000392246 RAB11FIP3O75154 756 aa18.43■□□□□ 0.54
SUMO1-203ENST00000392246 FGFR2P21802 821 aa18.43■□□□□ 0.54
SUMO1-203ENST00000392246 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
SUMO1-203ENST00000392246 NIM1KQ8IY84 436 aa18.43■□□□□ 0.54
SUMO1-203ENST00000392246 LPIN2Q92539 896 aa18.43■□□□□ 0.54
SUMO1-203ENST00000392246 DCTPP1Q9H773 170 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms