RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 NFKBIEO00221 500 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 XYLBO75191 536 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 SOX18P35713 384 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 ELMSAN1Q6PJG2 1045 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 WFDC8Q8IUA0 241 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 WWC1Q8IX03 1113 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 AGGF1Q8N302 714 aaeCLIP4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 STK32AQ8WU08 396 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 USP21Q9UK80 565 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 GTF3C3Q9Y5Q9 886 aa4.27□□□□□ -1.73
SNORA40.19-201ENST00000390846 PRR19A6NJB7 356 aa4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 ADAM11O75078 769 aa4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 KIF4AO95239 1232 aa4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 CYP2E1P05181 493 aaPredicted RBP4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 ATP11AP98196 1134 aa4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 RGL4Q8IZJ4 473 aa4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 OR13H1Q8NG92 308 aa4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 CALR3Q96L12 384 aaKnown RBP4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 PNMA5Q96PV4 448 aa4.26□□□□□ -1.73
SNORA40.19-201ENST00000390846 KIAA1324LA8MWY0 1029 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 FSTP19883 344 aa4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 ELOAQ14241 798 aaKnown RBP4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 NFXL1Q6ZNB6 911 aa4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 KIAA1211Q6ZU35 1233 aa4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 CMTR1Q8N1G2 835 aaKnown RBP4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 IL22RA1Q8N6P7 574 aa4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 NSUN5Q96P11 429 aaKnown RBP4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 AKTIPQ9H8T0 292 aa4.25□□□□□ -1.73
SNORA40.19-201ENST00000390846 COL17A1Q9UMD9 1497 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 ACIN1Q9UKV3 1341 aaKnown RBP4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 PCSK7Q16549 785 aa4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 HGSNATQ68CP4 663 aa4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 ZDHHC13Q8IUH4 622 aa4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 CEP120Q8N960 986 aa4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 FOXD4L4Q8WXT5 416 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 FAM46AQ96IP4 442 aaKnown RBP4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 ZNF777Q9ULD5 760 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 NOVA2Q9UNW9 492 aaKnown RBP4.24□□□□□ -1.73
SNORA40.19-201ENST00000390846 DDX3YO15523 660 aaKnown RBP4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 PRMT3O60678 531 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 ACPPP15309 386 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 EPB42P16452 691 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 EIF2AK2P19525 551 aaKnown RBP4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 SCNN1AP37088 669 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 GDF6Q6KF10 455 aaPredicted RBP4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 NLRP13Q86W25 1043 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 FAM200AQ8TCP9 573 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 FMNL2Q96PY5 1086 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 MRPL18Q9H0U6 180 aaKnown RBP4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 CXXC1Q9P0U4 656 aaPredicted RBP4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 CNTN3Q9P232 1028 aa4.23□□□□□ -1.73
SNORA40.19-201ENST00000390846 SPINK2P20155 84 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 EPHA1P21709 976 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 SWI5Q1ZZU3 235 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 TMEM132AQ24JP5 1023 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 TMEM164Q5U3C3 297 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 MCTP1Q6DN14 999 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 TXNDC11Q6PKC3 985 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 SHISA5Q8N114 240 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 POP1Q99575 1024 aaKnown RBP4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 ADAM19Q9H013 955 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 RASSF4Q9H2L5 321 aa4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 OAS3Q9Y6K5 1087 aaKnown RBP4.22□□□□□ -1.73
SNORA40.19-201ENST00000390846 LINC01387J3KSC0 135 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 TGFB1P01137 390 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 SSTR4P31391 388 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 COL19A1Q14993 1142 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 C16orf46Q6P387 395 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 HHIPQ96QV1 700 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 CHRDQ9H2X0 955 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 SH2B1Q9NRF2 756 aaPredicted RBP4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 TMEM63CQ9P1W3 806 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 SEPT3Q9UH03 358 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 SALL4Q9UJQ4 1053 aa4.21□□□□□ -1.74
SNORA40.19-201ENST00000390846 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 DLGAP3O95886 979 aa4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 NAA30Q147X3 362 aaPredicted RBP4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 SLC51AQ86UW1 340 aa4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 UBASH3BQ8TF42 649 aa4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 KLHDC7BQ96G42 594 aa4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 GGNBP2Q9H3C7 697 aa4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 GOLGA2P5Q9HBQ8 144 aa4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 RBM19Q9Y4C8 960 aaKnown RBP4.2□□□□□ -1.74
SNORA40.19-201ENST00000390846 TRPA1O75762 1119 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 ATG7O95352 703 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 IGLV1-40P01703 118 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 PSAPP07602 524 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 RFX1P22670 979 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 BRD2P25440 801 aaKnown RBP4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 ZAP70P43403 619 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 NBPF11Q86T75 865 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 ATCAYQ86WG3 371 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 CLP1Q92989 425 aaKnown RBP4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 CARD10Q9BWT7 1032 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 PBX4Q9BYU1 374 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 ZMYND15Q9H091 742 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 C7orf69Q9H7B7 122 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 SRA1Q9HD15 236 aaKnown RBP4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 RAXQ9Y2V3 346 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms