RNA–Protein interactions for RNA: ENST00000390607.2

IGHV3-21-201, Transcript of immunoglobulin heavy variable 3-21, humanhuman

APPRIS P1 BASIC

Gene IGHV3-21, Length 430 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-21-201ENST00000390607 NSFL1CQ9UNZ2 370 aaKnown RBP18.44■□□□□ 0.54
IGHV3-21-201ENST00000390607 COL4A1P02462 1669 aa18.44■□□□□ 0.54
IGHV3-21-201ENST00000390607 ECE2O60344 883 aa18.43■□□□□ 0.54
IGHV3-21-201ENST00000390607 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
IGHV3-21-201ENST00000390607 ZNF296Q8WUU4 475 aaPredicted RBP18.43■□□□□ 0.54
IGHV3-21-201ENST00000390607 GPSM2P81274 684 aa18.42■□□□□ 0.54
IGHV3-21-201ENST00000390607 TCIRG1Q13488 830 aa18.42■□□□□ 0.54
IGHV3-21-201ENST00000390607 DOK7Q18PE1 504 aa18.42■□□□□ 0.54
IGHV3-21-201ENST00000390607 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
IGHV3-21-201ENST00000390607 GCC1Q96CN9 775 aa18.42■□□□□ 0.54
IGHV3-21-201ENST00000390607 HDAC9Q9UKV0 1011 aa18.42■□□□□ 0.54
IGHV3-21-201ENST00000390607 PAPPA2Q9BXP8 1791 aa18.42■□□□□ 0.54
IGHV3-21-201ENST00000390607 C6orf229H3BNL8 230 aa18.41■□□□□ 0.54
IGHV3-21-201ENST00000390607 TBC1D8O95759 1140 aa18.41■□□□□ 0.54
IGHV3-21-201ENST00000390607 VIL1P09327 827 aaKnown RBP18.41■□□□□ 0.54
IGHV3-21-201ENST00000390607 FKBP1BP68106 108 aa18.41■□□□□ 0.54
IGHV3-21-201ENST00000390607 COPS6Q7L5N1 327 aa18.41■□□□□ 0.54
IGHV3-21-201ENST00000390607 ANGEL2Q5VTE6 544 aaKnown RBP18.4■□□□□ 0.54
IGHV3-21-201ENST00000390607 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
IGHV3-21-201ENST00000390607 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
IGHV3-21-201ENST00000390607 SCN9AQ15858 1988 aa18.4■□□□□ 0.54
IGHV3-21-201ENST00000390607 ZNF609O15014 1411 aa18.4■□□□□ 0.54
IGHV3-21-201ENST00000390607 ZNF280AP59817 542 aaPredicted RBP18.39■□□□□ 0.53
IGHV3-21-201ENST00000390607 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
IGHV3-21-201ENST00000390607 NOM1Q5C9Z4 860 aaKnown RBP18.39■□□□□ 0.53
IGHV3-21-201ENST00000390607 FBXO46Q6PJ61 603 aaPredicted RBP18.39■□□□□ 0.53
IGHV3-21-201ENST00000390607 XAGE3Q8WTP9 111 aa18.39■□□□□ 0.53
IGHV3-21-201ENST00000390607 EYA3Q99504 573 aa18.39■□□□□ 0.53
IGHV3-21-201ENST00000390607 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
IGHV3-21-201ENST00000390607 SCARF1Q14162 830 aa18.38■□□□□ 0.53
IGHV3-21-201ENST00000390607 MOB2Q70IA6 237 aa18.38■□□□□ 0.53
IGHV3-21-201ENST00000390607 TBC1D16Q8TBP0 767 aa18.38■□□□□ 0.53
IGHV3-21-201ENST00000390607 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
IGHV3-21-201ENST00000390607 GPR25O00155 361 aa18.37■□□□□ 0.53
IGHV3-21-201ENST00000390607 TM4SF4P48230 202 aa18.37■□□□□ 0.53
IGHV3-21-201ENST00000390607 HABP4Q5JVS0 413 aaKnown RBP18.37■□□□□ 0.53
IGHV3-21-201ENST00000390607 ZNF428Q96B54 188 aa18.37■□□□□ 0.53
IGHV3-21-201ENST00000390607 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
IGHV3-21-201ENST00000390607 PITPNM2Q9BZ72 1349 aa18.35■□□□□ 0.53
IGHV3-21-201ENST00000390607 ZC3H12CQ9C0D7 883 aaKnown RBP18.35■□□□□ 0.53
IGHV3-21-201ENST00000390607 UBE2Q2LH0YL09 131 aa18.34■□□□□ 0.53
IGHV3-21-201ENST00000390607 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-21-201ENST00000390607 AGBL3Q8NEM8 1001 aa18.34■□□□□ 0.53
IGHV3-21-201ENST00000390607 FAM89AQ96GI7 184 aa18.34■□□□□ 0.53
IGHV3-21-201ENST00000390607 PODXL2Q9NZ53 605 aa18.34■□□□□ 0.53
IGHV3-21-201ENST00000390607 PSME4Q14997 1843 aa18.33■□□□□ 0.53
IGHV3-21-201ENST00000390607 GMLQ99445 158 aa18.33■□□□□ 0.52
IGHV3-21-201ENST00000390607 ISCA1Q9BUE6 129 aa18.33■□□□□ 0.52
IGHV3-21-201ENST00000390607 CFHR5Q9BXR6 569 aa18.33■□□□□ 0.52
IGHV3-21-201ENST00000390607 MYOZ2Q9NPC6 264 aa18.33■□□□□ 0.52
IGHV3-21-201ENST00000390607 SCAF8Q9UPN6 1271 aaKnown RBP18.33■□□□□ 0.52
IGHV3-21-201ENST00000390607 RPS8P62241 208 aaKnown RBP18.32■□□□□ 0.52
IGHV3-21-201ENST00000390607 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
IGHV3-21-201ENST00000390607 FKTNO75072 461 aa18.31■□□□□ 0.52
IGHV3-21-201ENST00000390607 USP17L8P0C7I0 530 aa18.31■□□□□ 0.52
IGHV3-21-201ENST00000390607 R3HDMLQ9H3Y0 253 aa18.31■□□□□ 0.52
IGHV3-21-201ENST00000390607 CHL1O00533 1208 aa18.3■□□□□ 0.52
IGHV3-21-201ENST00000390607 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
IGHV3-21-201ENST00000390607 PRAMEF18Q5VWM3 479 aa18.3■□□□□ 0.52
IGHV3-21-201ENST00000390607 PLBD2Q8NHP8 589 aa18.3■□□□□ 0.52
IGHV3-21-201ENST00000390607 ATP5J2-PTCD1G3V325 749 aa18.29■□□□□ 0.52
IGHV3-21-201ENST00000390607 G3V3G9 751 aa18.29■□□□□ 0.52
IGHV3-21-201ENST00000390607 UFL1O94874 794 aa18.29■□□□□ 0.52
IGHV3-21-201ENST00000390607 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
IGHV3-21-201ENST00000390607 DCAF8Q5TAQ9 597 aa18.29■□□□□ 0.52
IGHV3-21-201ENST00000390607 POTEFA5A3E0 1075 aa18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 SREBF2Q12772 1141 aa18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 MKRN3Q13064 507 aaKnown RBP18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 HDGFL1Q5TGJ6 251 aa18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 CHPF2Q9P2E5 772 aa18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 GGA1Q9UJY5 639 aa18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 TRIM35Q9UPQ4 493 aa18.28■□□□□ 0.52
IGHV3-21-201ENST00000390607 IRS4O14654 1257 aaPredicted RBP18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 APAF1O14727 1248 aa18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 FXR1P51114 621 aaKnown RBP eCLIP18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 NBPF9Q3BBW0 867 aa18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 SEC31BQ9NQW1 1179 aa18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 ANKIB1Q9P2G1 1089 aa18.27■□□□□ 0.52
IGHV3-21-201ENST00000390607 RBBP6Q7Z6E9 1792 aaKnown RBP18.27■□□□□ 0.51
IGHV3-21-201ENST00000390607 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
IGHV3-21-201ENST00000390607 TTLL12Q14166 644 aaPredicted RBP18.26■□□□□ 0.51
IGHV3-21-201ENST00000390607 USP17L3A6NCW0 530 aa18.25■□□□□ 0.51
IGHV3-21-201ENST00000390607 USP17L4A6NCW7 530 aa18.25■□□□□ 0.51
IGHV3-21-201ENST00000390607 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
IGHV3-21-201ENST00000390607 USP17L1Q7RTZ2 530 aa18.25■□□□□ 0.51
IGHV3-21-201ENST00000390607 DBF4Q9UBU7 674 aaPredicted RBP18.25■□□□□ 0.51
IGHV3-21-201ENST00000390607 ZNF646O15015 1829 aaPredicted RBP18.25■□□□□ 0.51
IGHV3-21-201ENST00000390607 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
IGHV3-21-201ENST00000390607 PTPN12Q05209 780 aaKnown RBP18.24■□□□□ 0.51
IGHV3-21-201ENST00000390607 DUSP27Q5VZP5 1158 aa18.24■□□□□ 0.51
IGHV3-21-201ENST00000390607 OTOP1Q7RTM1 612 aa18.24■□□□□ 0.51
IGHV3-21-201ENST00000390607 PODNQ7Z5L7 613 aa18.24■□□□□ 0.51
IGHV3-21-201ENST00000390607 TRIM17Q9Y577 477 aa18.24■□□□□ 0.51
IGHV3-21-201ENST00000390607 WNT10BO00744 389 aa18.23■□□□□ 0.51
IGHV3-21-201ENST00000390607 NF2P35240 595 aa18.23■□□□□ 0.51
IGHV3-21-201ENST00000390607 GNAI1P63096 354 aa18.23■□□□□ 0.51
IGHV3-21-201ENST00000390607 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms