RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 SUSD4Q5VX71 490 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 RUFY3Q7L099 469 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 SEC62Q99442 399 aaKnown RBP21.82■■□□□ 1.08
ACTN4-202ENST00000390009 LIMCH1Q9UPQ0 1083 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 RPAP1Q9BWH6 1393 aaPredicted RBP21.82■■□□□ 1.08
ACTN4-202ENST00000390009 SH3TC1Q8TE82 1336 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 METTL24Q5JXM2 366 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 GORABQ5T7V8 394 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 TICAM2Q86XR7 235 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 PDRG1Q9NUG6 133 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 GOLGA6L22H0YM25 854 aa21.81■■□□□ 1.08
ACTN4-202ENST00000390009 CCDC129Q6ZRS4 1044 aa21.81■■□□□ 1.08
ACTN4-202ENST00000390009 AK7Q96M32 723 aa21.81■■□□□ 1.08
ACTN4-202ENST00000390009 CNNM1Q9NRU3 951 aa21.81■■□□□ 1.08
ACTN4-202ENST00000390009 BCORQ6W2J9 1755 aa21.81■■□□□ 1.08
ACTN4-202ENST00000390009 SPATA31A6Q5VVP1 1343 aa21.81■■□□□ 1.08
ACTN4-202ENST00000390009 TTC39AQ5SRH9 613 aa21.8■■□□□ 1.08
ACTN4-202ENST00000390009 USPL1Q5W0Q7 1092 aa21.8■■□□□ 1.08
ACTN4-202ENST00000390009 HMG20BQ9P0W2 317 aa21.8■■□□□ 1.08
ACTN4-202ENST00000390009 USP21Q9UK80 565 aa21.8■■□□□ 1.08
ACTN4-202ENST00000390009 DDX60Q8IY21 1712 aaKnown RBP21.8■■□□□ 1.08
ACTN4-202ENST00000390009 PSMA5P28066 241 aa21.8■■□□□ 1.08
ACTN4-202ENST00000390009 ATP2B3Q16720 1220 aa21.79■■□□□ 1.08
ACTN4-202ENST00000390009 PARP10Q53GL7 1025 aa21.79■■□□□ 1.08
ACTN4-202ENST00000390009 LARP6Q9BRS8 491 aaKnown RBP21.79■■□□□ 1.08
ACTN4-202ENST00000390009 UTP14AQ9BVJ6 771 aaKnown RBP21.79■■□□□ 1.08
ACTN4-202ENST00000390009 LRP5O75197 1615 aa21.79■■□□□ 1.08
ACTN4-202ENST00000390009 HELLSQ9NRZ9 838 aa21.79■■□□□ 1.08
ACTN4-202ENST00000390009 THSD7AQ9UPZ6 1657 aa21.79■■□□□ 1.08
ACTN4-202ENST00000390009 LAMB2P55268 1798 aa21.78■■□□□ 1.08
ACTN4-202ENST00000390009 FAM177BA6PVY3 158 aa21.78■■□□□ 1.08
ACTN4-202ENST00000390009 TSGA10IPQ3SY00 556 aa21.78■■□□□ 1.08
ACTN4-202ENST00000390009 GZF1Q9H116 711 aaPredicted RBP21.78■■□□□ 1.08
ACTN4-202ENST00000390009 HCLS1P14317 486 aaPredicted RBP21.77■■□□□ 1.08
ACTN4-202ENST00000390009 FKBP4Q02790 459 aaKnown RBP eCLIP21.77■■□□□ 1.081e-6■■□□□ 12.1
ACTN4-202ENST00000390009 VGLL2Q8N8G2 317 aa21.77■■□□□ 1.08
ACTN4-202ENST00000390009 LINC00116Q8NCU8 138 aa21.77■■□□□ 1.08
ACTN4-202ENST00000390009 NIP7Q9Y221 180 aaKnown RBP eCLIP21.77■■□□□ 1.08
ACTN4-202ENST00000390009 TAF6LQ9Y6J9 622 aa21.77■■□□□ 1.08
ACTN4-202ENST00000390009 SKOR2Q2VWA4 1001 aaPredicted RBP21.77■■□□□ 1.08
ACTN4-202ENST00000390009 SLFNL1Q499Z3 407 aa21.77■■□□□ 1.08
ACTN4-202ENST00000390009 ZMYM1Q5SVZ6 1142 aa21.77■■□□□ 1.08
ACTN4-202ENST00000390009 U3KPZ7 1027 aaPredicted RBP21.77■■□□□ 1.08
ACTN4-202ENST00000390009 BTAF1O14981 1849 aa21.77■■□□□ 1.08
ACTN4-202ENST00000390009 MYH7P12883 1935 aa21.77■■□□□ 1.07
ACTN4-202ENST00000390009 AKAP11Q9UKA4 1901 aa21.77■■□□□ 1.07
ACTN4-202ENST00000390009 ABCC12Q96J65 1359 aa21.76■■□□□ 1.07
ACTN4-202ENST00000390009 BRD1O95696 1058 aa21.76■■□□□ 1.07
ACTN4-202ENST00000390009 RNF113AO15541 343 aaKnown RBP21.76■■□□□ 1.07
ACTN4-202ENST00000390009 MCTP1Q6DN14 999 aa21.76■■□□□ 1.07
ACTN4-202ENST00000390009 BLOC1S2Q6QNY1 142 aa21.76■■□□□ 1.07
ACTN4-202ENST00000390009 PDE8BO95263 885 aa21.75■■□□□ 1.07
ACTN4-202ENST00000390009 LARGE1O95461 756 aa21.75■■□□□ 1.07
ACTN4-202ENST00000390009 NTSR2O95665 410 aa21.75■■□□□ 1.07
ACTN4-202ENST00000390009 COL9A3Q14050 684 aaPredicted RBP21.75■■□□□ 1.07
ACTN4-202ENST00000390009 SCARF1Q14162 830 aa21.75■■□□□ 1.07
ACTN4-202ENST00000390009 PTF1AQ7RTS3 328 aa21.75■■□□□ 1.07
ACTN4-202ENST00000390009 ZSCAN31Q96LW9 406 aaPredicted RBP21.75■■□□□ 1.07
ACTN4-202ENST00000390009 ZNF652Q9Y2D9 606 aa21.75■■□□□ 1.07
ACTN4-202ENST00000390009 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
ACTN4-202ENST00000390009 KCNQ4P56696 695 aa21.74■■□□□ 1.07
ACTN4-202ENST00000390009 KRT32Q14532 448 aa21.74■■□□□ 1.07
ACTN4-202ENST00000390009 SH2B1Q9NRF2 756 aaPredicted RBP21.74■■□□□ 1.07
ACTN4-202ENST00000390009 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.74■■□□□ 1.07
ACTN4-202ENST00000390009 RPS6KB1P23443 525 aa21.73■■□□□ 1.07
ACTN4-202ENST00000390009 FOXD4L5Q5VV16 416 aaPredicted RBP21.73■■□□□ 1.07
ACTN4-202ENST00000390009 FOXD4L4Q8WXT5 416 aaPredicted RBP21.73■■□□□ 1.07
ACTN4-202ENST00000390009 ARAP2Q8WZ64 1704 aa21.73■■□□□ 1.07
ACTN4-202ENST00000390009 MAST3O60307 1309 aa21.73■■□□□ 1.07
ACTN4-202ENST00000390009 ZAP70P43403 619 aa21.73■■□□□ 1.07
ACTN4-202ENST00000390009 LRRFIP1Q32MZ4 808 aaKnown RBP21.73■■□□□ 1.07
ACTN4-202ENST00000390009 CLEC4GQ6UXB4 293 aa21.73■■□□□ 1.07
ACTN4-202ENST00000390009 MROH5Q6ZUA9 1318 aa21.73■■□□□ 1.07
ACTN4-202ENST00000390009 CNTNAP4Q9C0A0 1308 aa21.73■■□□□ 1.07
ACTN4-202ENST00000390009 CYP21A2P08686 494 aa21.72■■□□□ 1.07
ACTN4-202ENST00000390009 DSCC1Q9BVC3 393 aa21.72■■□□□ 1.07
ACTN4-202ENST00000390009 LAMA4Q16363 1823 aa21.72■■□□□ 1.07
ACTN4-202ENST00000390009 HSP90B1P14625 803 aaKnown RBP21.71■■□□□ 1.07
ACTN4-202ENST00000390009 ALDH8A1Q9H2A2 487 aaPredicted RBP21.71■■□□□ 1.07
ACTN4-202ENST00000390009 MCAMP43121 646 aa21.71■■□□□ 1.07
ACTN4-202ENST00000390009 ME3Q16798 604 aa21.71■■□□□ 1.07
ACTN4-202ENST00000390009 CCDC152Q4G0S7 254 aa21.71■■□□□ 1.07
ACTN4-202ENST00000390009 PI16Q6UXB8 463 aa21.71■■□□□ 1.07
ACTN4-202ENST00000390009 CCDC83Q8IWF9 413 aa21.71■■□□□ 1.07
ACTN4-202ENST00000390009 ZNF512BQ96KM6 892 aaPredicted RBP21.71■■□□□ 1.07
ACTN4-202ENST00000390009 SEC31BQ9NQW1 1179 aa21.71■■□□□ 1.07
ACTN4-202ENST00000390009 SCN7AQ01118 1682 aa21.71■■□□□ 1.07
ACTN4-202ENST00000390009 ZFYP08048 801 aaPredicted RBP21.7■■□□□ 1.06
ACTN4-202ENST00000390009 ANKRD1Q15327 319 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 PUM3Q15397 648 aaKnown RBP21.7■■□□□ 1.06
ACTN4-202ENST00000390009 TCEANC2Q96MN5 208 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 TPCN1Q9ULQ1 816 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 SMC3Q9UQE7 1217 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 M0R2C6 588 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 OSBP2Q969R2 916 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 NEK1Q96PY6 1258 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 MPHOSPH8Q99549 860 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 LMBRD1Q9NUN5 540 aa21.7■■□□□ 1.06
ACTN4-202ENST00000390009 MYO5AQ9Y4I1 1855 aaKnown RBP21.69■■□□□ 1.06
ACTN4-202ENST00000390009 RTL9Q8NET4 1388 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms