RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 DUSP27Q5VZP5 1158 aa29.38■■■□□ 2.29
VLDLR-201ENST00000382096 KRT26Q7Z3Y9 468 aa29.38■■■□□ 2.29
VLDLR-201ENST00000382096 MCOLN1Q9GZU1 580 aa29.38■■■□□ 2.29
VLDLR-201ENST00000382096 IFT57Q9NWB7 429 aa29.38■■■□□ 2.29
VLDLR-201ENST00000382096 IRS4O14654 1257 aaPredicted RBP29.37■■■□□ 2.29
VLDLR-201ENST00000382096 MLLT1Q03111 559 aaPredicted RBP29.37■■■□□ 2.29
VLDLR-201ENST00000382096 DLK2Q6UY11 383 aa29.37■■■□□ 2.29
VLDLR-201ENST00000382096 ZIC5Q96T25 663 aa29.37■■■□□ 2.29
VLDLR-201ENST00000382096 TNRC18O15417 2968 aaPredicted RBP29.36■■■□□ 2.29
VLDLR-201ENST00000382096 CALD1Q05682 793 aaKnown RBP29.36■■■□□ 2.29
VLDLR-201ENST00000382096 RTL5Q5HYW3 569 aaPredicted RBP29.36■■■□□ 2.29
VLDLR-201ENST00000382096 TBC1D16Q8TBP0 767 aa29.36■■■□□ 2.29
VLDLR-201ENST00000382096 KCNQ5Q9NR82 932 aa29.36■■■□□ 2.29
VLDLR-201ENST00000382096 RPS8P62241 208 aaKnown RBP29.35■■■□□ 2.29
VLDLR-201ENST00000382096 FAM155AB1AL88 458 aaPredicted RBP29.34■■■□□ 2.29
VLDLR-201ENST00000382096 GNAI1P63096 354 aa29.34■■■□□ 2.29
VLDLR-201ENST00000382096 DOK7Q18PE1 504 aa29.34■■■□□ 2.29
VLDLR-201ENST00000382096 DCPSQ96C86 337 aaKnown RBP29.34■■■□□ 2.29
VLDLR-201ENST00000382096 GBA2Q9HCG7 927 aaPredicted RBP29.34■■■□□ 2.29
VLDLR-201ENST00000382096 PODXL2Q9NZ53 605 aa29.34■■■□□ 2.29
VLDLR-201ENST00000382096 ZNF609O15014 1411 aa29.34■■■□□ 2.29
VLDLR-201ENST00000382096 RGMBQ6NW40 437 aa29.33■■■□□ 2.29
VLDLR-201ENST00000382096 ADM5C9JUS6 153 aa29.32■■■□□ 2.28
VLDLR-201ENST00000382096 VIL1P09327 827 aaKnown RBP29.32■■■□□ 2.28
VLDLR-201ENST00000382096 C2orf69Q8N8R5 385 aa29.32■■■□□ 2.28
VLDLR-201ENST00000382096 ZBTB38Q8NAP3 1195 aaPredicted RBP29.32■■■□□ 2.28
VLDLR-201ENST00000382096 KIF4BQ2VIQ3 1234 aa29.31■■■□□ 2.28
VLDLR-201ENST00000382096 ZC3H12CQ9C0D7 883 aaKnown RBP29.31■■■□□ 2.28
VLDLR-201ENST00000382096 SLC34A2O95436 690 aa29.3■■■□□ 2.28
VLDLR-201ENST00000382096 HSP90B1P14625 803 aaKnown RBP29.3■■■□□ 2.28
VLDLR-201ENST00000382096 DGKZQ13574 1117 aa29.3■■■□□ 2.28
VLDLR-201ENST00000382096 RBM26Q5T8P6 1007 aaKnown RBP29.3■■■□□ 2.28
VLDLR-201ENST00000382096 CCDC102AQ96A19 550 aa29.3■■■□□ 2.28
VLDLR-201ENST00000382096 MYH3P11055 1940 aa29.3■■■□□ 2.28
VLDLR-201ENST00000382096 GOLGA2Q08379 1002 aa29.29■■■□□ 2.28
VLDLR-201ENST00000382096 RIC3Q7Z5B4 369 aa29.29■■■□□ 2.28
VLDLR-201ENST00000382096 SEC31BQ9NQW1 1179 aa29.29■■■□□ 2.28
VLDLR-201ENST00000382096 SAGE1Q9NXZ1 904 aa29.29■■■□□ 2.28
VLDLR-201ENST00000382096 UFL1O94874 794 aa29.28■■■□□ 2.28
VLDLR-201ENST00000382096 GGA3Q9NZ52 723 aa29.28■■■□□ 2.28
VLDLR-201ENST00000382096 SPEF2Q9C093 1822 aa29.27■■■□□ 2.28
VLDLR-201ENST00000382096 ZNF157P51786 506 aaPredicted RBP29.26■■■□□ 2.27
VLDLR-201ENST00000382096 CCDC184Q52MB2 194 aa29.26■■■□□ 2.27
VLDLR-201ENST00000382096 SULF1Q8IWU6 871 aa29.26■■■□□ 2.27
VLDLR-201ENST00000382096 PHAXQ9H814 394 aaKnown RBP29.26■■■□□ 2.27
VLDLR-201ENST00000382096 ANKIB1Q9P2G1 1089 aa29.26■■■□□ 2.27
VLDLR-201ENST00000382096 GGA1Q9UJY5 639 aa29.26■■■□□ 2.27
VLDLR-201ENST00000382096 ZNF646O15015 1829 aaPredicted RBP29.26■■■□□ 2.27
VLDLR-201ENST00000382096 PCCAP05165 728 aaPredicted RBP29.25■■■□□ 2.27
VLDLR-201ENST00000382096 ZEB1P37275 1124 aaPredicted RBP29.25■■■□□ 2.27
VLDLR-201ENST00000382096 ZNF280AP59817 542 aaPredicted RBP29.25■■■□□ 2.27
VLDLR-201ENST00000382096 KIF23Q02241 960 aaPredicted RBP29.25■■■□□ 2.27
VLDLR-201ENST00000382096 CCDC191Q8NCU4 936 aa29.25■■■□□ 2.27
VLDLR-201ENST00000382096 PAPPA2Q9BXP8 1791 aa29.25■■■□□ 2.27
VLDLR-201ENST00000382096 ASTN2O75129 1339 aaPredicted RBP29.24■■■□□ 2.27
VLDLR-201ENST00000382096 CCDC152Q4G0S7 254 aa29.24■■■□□ 2.27
VLDLR-201ENST00000382096 C8orf58Q8NAV2 365 aa29.24■■■□□ 2.27
VLDLR-201ENST00000382096 AGBL3Q8NEM8 1001 aa29.24■■■□□ 2.27
VLDLR-201ENST00000382096 MYD88Q99836 296 aa29.24■■■□□ 2.27
VLDLR-201ENST00000382096 G3V3G9 751 aa29.23■■■□□ 2.27
VLDLR-201ENST00000382096 PDE8AO60658 829 aa29.23■■■□□ 2.27
VLDLR-201ENST00000382096 SLC10A3P09131 477 aa29.23■■■□□ 2.27
VLDLR-201ENST00000382096 DCAF8Q5TAQ9 597 aa29.23■■■□□ 2.27
VLDLR-201ENST00000382096 CDCA5Q96FF9 252 aa29.23■■■□□ 2.27
VLDLR-201ENST00000382096 ELL2O00472 640 aaPredicted RBP29.22■■■□□ 2.27
VLDLR-201ENST00000382096 CCDC27Q2M243 656 aa29.22■■■□□ 2.27
VLDLR-201ENST00000382096 RSBN1LQ6PCB5 846 aaPredicted RBP29.22■■■□□ 2.27
VLDLR-201ENST00000382096 CHMP4AQ9BY43 222 aa29.21■■■□□ 2.27
VLDLR-201ENST00000382096 XDHP47989 1333 aa29.2■■■□□ 2.27
VLDLR-201ENST00000382096 GMLQ99445 158 aa29.2■■■□□ 2.26
VLDLR-201ENST00000382096 CWC25Q9NXE8 425 aaPredicted RBP29.2■■■□□ 2.26
VLDLR-201ENST00000382096 RNF186Q9NXI6 227 aa29.2■■■□□ 2.26
VLDLR-201ENST00000382096 PDE4DIPQ5VU43 2346 aa29.19■■■□□ 2.26
VLDLR-201ENST00000382096 SCARF1Q14162 830 aa29.19■■■□□ 2.26
VLDLR-201ENST00000382096 ANGEL2Q5VTE6 544 aaKnown RBP29.19■■■□□ 2.26
VLDLR-201ENST00000382096 TRPA1O75762 1119 aa29.18■■■□□ 2.26
VLDLR-201ENST00000382096 NCBP3Q53F19 620 aaKnown RBP29.18■■■□□ 2.26
VLDLR-201ENST00000382096 ANKRD18AQ8IVF6 992 aa29.18■■■□□ 2.26
VLDLR-201ENST00000382096 CSRNP1Q96S65 589 aa29.18■■■□□ 2.26
VLDLR-201ENST00000382096 METTL22Q9BUU2 404 aaPredicted RBP29.18■■■□□ 2.26
VLDLR-201ENST00000382096 PITPNM2Q9BZ72 1349 aa29.18■■■□□ 2.26
VLDLR-201ENST00000382096 CCDC30Q5VVM6 783 aa29.17■■■□□ 2.26
VLDLR-201ENST00000382096 USP17L8P0C7I0 530 aa29.16■■■□□ 2.26
VLDLR-201ENST00000382096 FKBP1BP68106 108 aa29.16■■■□□ 2.26
VLDLR-201ENST00000382096 REM2Q8IYK8 340 aaPredicted RBP29.16■■■□□ 2.26
VLDLR-201ENST00000382096 TSPYL6Q8N831 410 aa29.16■■■□□ 2.26
VLDLR-201ENST00000382096 CCDC85AQ96PX6 553 aaPredicted RBP29.16■■■□□ 2.26
VLDLR-201ENST00000382096 MYOZ2Q9NPC6 264 aa29.16■■■□□ 2.26
VLDLR-201ENST00000382096 DDX58O95786 925 aaKnown RBP29.15■■■□□ 2.26
VLDLR-201ENST00000382096 ATP2B4P23634 1241 aa29.15■■■□□ 2.26
VLDLR-201ENST00000382096 PODNQ7Z5L7 613 aa29.15■■■□□ 2.26
VLDLR-201ENST00000382096 RASAL3Q86YV0 1011 aa29.15■■■□□ 2.26
VLDLR-201ENST00000382096 WWC1Q8IX03 1113 aa29.15■■■□□ 2.26
VLDLR-201ENST00000382096 JARID2Q92833 1246 aaPredicted RBP29.15■■■□□ 2.26
VLDLR-201ENST00000382096 USP17L3A6NCW0 530 aa29.14■■■□□ 2.26
VLDLR-201ENST00000382096 USP17L4A6NCW7 530 aa29.14■■■□□ 2.26
VLDLR-201ENST00000382096 USP17L1Q7RTZ2 530 aa29.14■■■□□ 2.26
VLDLR-201ENST00000382096 MED23Q9ULK4 1368 aa29.13■■■□□ 2.25
VLDLR-201ENST00000382096 CTSWP56202 376 aa29.12■■■□□ 2.25
VLDLR-201ENST00000382096 TSR2Q969E8 191 aaKnown RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms