RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 LRRFIP2Q9Y608 721 aaKnown RBP24.31■■□□□ 1.48
GTF3A-201ENST00000381140 A0A1B0GUL6 1792 aa24.3■■□□□ 1.48
GTF3A-201ENST00000381140 AOC3Q16853 763 aa24.3■■□□□ 1.48
GTF3A-201ENST00000381140 GNAI3P08754 354 aa24.29■■□□□ 1.48
GTF3A-201ENST00000381140 RABL6Q3YEC7 729 aaPredicted RBP24.29■■□□□ 1.48
GTF3A-201ENST00000381140 GPR101Q96P66 508 aaPredicted RBP24.29■■□□□ 1.48
GTF3A-201ENST00000381140 RTFDC1Q9BY42 306 aaPredicted RBP24.29■■□□□ 1.48
GTF3A-201ENST00000381140 COL4A5P29400 1685 aa24.29■■□□□ 1.48
GTF3A-201ENST00000381140 UFL1O94874 794 aa24.29■■□□□ 1.48
GTF3A-201ENST00000381140 JDP2Q8WYK2 163 aa24.29■■□□□ 1.48
GTF3A-201ENST00000381140 POLLQ9UGP5 575 aa24.29■■□□□ 1.48
GTF3A-201ENST00000381140 MINPP1Q9UNW1 487 aa24.29■■□□□ 1.48
GTF3A-201ENST00000381140 HDAC5Q9UQL6 1122 aa24.29■■□□□ 1.48
GTF3A-201ENST00000381140 RIMBP2O15034 1052 aa24.28■■□□□ 1.48
GTF3A-201ENST00000381140 TBC1D16Q8TBP0 767 aa24.28■■□□□ 1.48
GTF3A-201ENST00000381140 CNNM1Q9NRU3 951 aa24.28■■□□□ 1.48
GTF3A-201ENST00000381140 GGA1Q9UJY5 639 aa24.28■■□□□ 1.48
GTF3A-201ENST00000381140 XDHP47989 1333 aa24.27■■□□□ 1.48
GTF3A-201ENST00000381140 MS4A1P11836 297 aa24.27■■□□□ 1.48
GTF3A-201ENST00000381140 LDHAL6AQ6ZMR3 332 aa24.27■■□□□ 1.48
GTF3A-201ENST00000381140 NIM1KQ8IY84 436 aa24.27■■□□□ 1.48
GTF3A-201ENST00000381140 GPBP1L1Q9HC44 474 aaPredicted RBP24.27■■□□□ 1.48
GTF3A-201ENST00000381140 ZC3H4Q9UPT8 1303 aaKnown RBP24.26■■□□□ 1.47
GTF3A-201ENST00000381140 WASHC4Q2M389 1173 aa24.25■■□□□ 1.47
GTF3A-201ENST00000381140 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.25■■□□□ 1.47
GTF3A-201ENST00000381140 KLHDC4Q8TBB5 520 aa24.25■■□□□ 1.47
GTF3A-201ENST00000381140 EYA3Q99504 573 aa24.25■■□□□ 1.47
GTF3A-201ENST00000381140 PODXL2Q9NZ53 605 aa24.25■■□□□ 1.47
GTF3A-201ENST00000381140 CHRNDQ07001 517 aa24.24■■□□□ 1.47
GTF3A-201ENST00000381140 KIAA2012Q0VF49 1180 aa24.24■■□□□ 1.47
GTF3A-201ENST00000381140 HELBQ8NG08 1087 aaPredicted RBP24.24■■□□□ 1.47
GTF3A-201ENST00000381140 KDM2BQ8NHM5 1336 aa24.23■■□□□ 1.47
GTF3A-201ENST00000381140 ZNF541Q9H0D2 1346 aa24.23■■□□□ 1.47
GTF3A-201ENST00000381140 GNAI2P04899 355 aa24.23■■□□□ 1.47
GTF3A-201ENST00000381140 ATP2B4P23634 1241 aa24.23■■□□□ 1.47
GTF3A-201ENST00000381140 DPY19L2Q6NUT2 758 aa24.23■■□□□ 1.47
GTF3A-201ENST00000381140 PUS3Q9BZE2 481 aaKnown RBP24.23■■□□□ 1.47
GTF3A-201ENST00000381140 ANKRD2Q9GZV1 360 aa24.23■■□□□ 1.47
GTF3A-201ENST00000381140 WTIPA6NIX2 430 aaPredicted RBP24.22■■□□□ 1.47
GTF3A-201ENST00000381140 KCNJ4P48050 445 aa24.22■■□□□ 1.47
GTF3A-201ENST00000381140 VPS33BQ9H267 617 aa24.22■■□□□ 1.47
GTF3A-201ENST00000381140 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
GTF3A-201ENST00000381140 GLTPD2A6NH11 291 aa24.21■■□□□ 1.47
GTF3A-201ENST00000381140 G3V3G9 751 aa24.21■■□□□ 1.47
GTF3A-201ENST00000381140 TAF5LO75529 589 aa24.21■■□□□ 1.47
GTF3A-201ENST00000381140 EIF6P56537 245 aaKnown RBP24.21■■□□□ 1.47
GTF3A-201ENST00000381140 DOK7Q18PE1 504 aa24.21■■□□□ 1.47
GTF3A-201ENST00000381140 DCAF8Q5TAQ9 597 aa24.21■■□□□ 1.47
GTF3A-201ENST00000381140 ZC3H12CQ9C0D7 883 aaKnown RBP24.21■■□□□ 1.47
GTF3A-201ENST00000381140 C1orf115Q9H7X2 142 aa24.21■■□□□ 1.47
GTF3A-201ENST00000381140 DDNO94850 711 aaPredicted RBP24.2■■□□□ 1.46
GTF3A-201ENST00000381140 C20orf194Q5TEA3 1177 aa24.2■■□□□ 1.46
GTF3A-201ENST00000381140 DBNDD1Q9H9R9 158 aa24.2■■□□□ 1.46
GTF3A-201ENST00000381140 NMRK2Q9NPI5 230 aa24.2■■□□□ 1.46
GTF3A-201ENST00000381140 FZD9O00144 591 aa24.19■■□□□ 1.46
GTF3A-201ENST00000381140 LRRC24Q50LG9 513 aa24.19■■□□□ 1.46
GTF3A-201ENST00000381140 GJA3Q9Y6H8 435 aa24.19■■□□□ 1.46
GTF3A-201ENST00000381140 ZBTB7BO15156 539 aaPredicted RBP24.18■■□□□ 1.46
GTF3A-201ENST00000381140 RFX5P48382 616 aaPredicted RBP24.18■■□□□ 1.46
GTF3A-201ENST00000381140 MVPQ14764 893 aaKnown RBP24.18■■□□□ 1.46
GTF3A-201ENST00000381140 SIL1Q9H173 461 aa24.18■■□□□ 1.46
GTF3A-201ENST00000381140 ZNRF3Q9ULT6 936 aa24.18■■□□□ 1.46
GTF3A-201ENST00000381140 LEMD3Q9Y2U8 911 aa24.18■■□□□ 1.46
GTF3A-201ENST00000381140 ZNF804BA4D1E1 1349 aa24.18■■□□□ 1.46
GTF3A-201ENST00000381140 SNAP23O00161 211 aa24.17■■□□□ 1.46
GTF3A-201ENST00000381140 SRGAP3O43295 1099 aa24.17■■□□□ 1.46
GTF3A-201ENST00000381140 RRAGCQ9HB90 399 aa24.17■■□□□ 1.46
GTF3A-201ENST00000381140 SCN9AQ15858 1988 aa24.17■■□□□ 1.46
GTF3A-201ENST00000381140 ECE2O60344 883 aa24.16■■□□□ 1.46
GTF3A-201ENST00000381140 METTL24Q5JXM2 366 aa24.16■■□□□ 1.46
GTF3A-201ENST00000381140 PA2G4Q9UQ80 394 aaKnown RBP24.16■■□□□ 1.46
GTF3A-201ENST00000381140 RIPOR2Q9Y4F9 1068 aa24.16■■□□□ 1.46
GTF3A-201ENST00000381140 RAD17O75943 681 aa24.16■■□□□ 1.46
GTF3A-201ENST00000381140 KLRK1P26718 216 aa24.16■■□□□ 1.46
GTF3A-201ENST00000381140 PTPN12Q05209 780 aaKnown RBP24.16■■□□□ 1.46
GTF3A-201ENST00000381140 MED23Q9ULK4 1368 aa24.15■■□□□ 1.46
GTF3A-201ENST00000381140 WDR90Q96KV7 1748 aa24.15■■□□□ 1.46
GTF3A-201ENST00000381140 YDJCA8MPS7 323 aa24.15■■□□□ 1.46
GTF3A-201ENST00000381140 PDE3AQ14432 1141 aa24.15■■□□□ 1.46
GTF3A-201ENST00000381140 DDX19BQ9UMR2 479 aa24.15■■□□□ 1.46
GTF3A-201ENST00000381140 MROH5Q6ZUA9 1318 aa24.15■■□□□ 1.46
GTF3A-201ENST00000381140 EYA2O00167 538 aa24.14■■□□□ 1.45
GTF3A-201ENST00000381140 RRP1P56182 461 aaKnown RBP24.14■■□□□ 1.45
GTF3A-201ENST00000381140 CXCL9Q07325 125 aa24.14■■□□□ 1.45
GTF3A-201ENST00000381140 PNMA6EA0A0J9YXQ4 647 aa24.13■■□□□ 1.45
GTF3A-201ENST00000381140 CIAPIN1Q6FI81 312 aa24.13■■□□□ 1.45
GTF3A-201ENST00000381140 TXNRD3Q86VQ6 643 aa24.13■■□□□ 1.45
GTF3A-201ENST00000381140 GPC2Q8N158 579 aa24.13■■□□□ 1.45
GTF3A-201ENST00000381140 PSME4Q14997 1843 aa24.12■■□□□ 1.45
GTF3A-201ENST00000381140 SCN4AP35499 1836 aa24.12■■□□□ 1.45
GTF3A-201ENST00000381140 MTX1Q13505 466 aa24.12■■□□□ 1.45
GTF3A-201ENST00000381140 KCNQ5Q9NR82 932 aa24.11■■□□□ 1.45
GTF3A-201ENST00000381140 TNIP1Q15025 636 aa24.1■■□□□ 1.45
GTF3A-201ENST00000381140 ATG9AQ7Z3C6 839 aa24.1■■□□□ 1.45
GTF3A-201ENST00000381140 COPRSQ9NQ92 184 aa24.1■■□□□ 1.45
GTF3A-201ENST00000381140 KIF3CO14782 793 aa24.09■■□□□ 1.45
GTF3A-201ENST00000381140 VEGFAP15692 232 aaPredicted RBP24.09■■□□□ 1.45
GTF3A-201ENST00000381140 ATP8B2P98198 1209 aa24.09■■□□□ 1.45
GTF3A-201ENST00000381140 C16orf71Q8IYS4 520 aaPredicted RBP24.09■■□□□ 1.45
GTF3A-201ENST00000381140 FBXW7Q969H0 707 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms