RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 CAMKK2Q96RR4 588 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
ERCC8-202ENST00000381118 LRP5O75197 1615 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 TAF5LO75529 589 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 SERPINB2P05120 415 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 ADORA1P30542 326 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 SLC10A5Q5PT55 438 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 GORABQ5T7V8 394 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 PRR5LQ6MZQ0 368 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
ERCC8-202ENST00000381118 EDC3Q96F86 508 aaKnown RBP9.75□□□□□ -0.85
ERCC8-202ENST00000381118 DNAJC2Q99543 621 aaKnown RBP9.75□□□□□ -0.85
ERCC8-202ENST00000381118 C22orf23Q9BZE7 217 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 AKAP2Q9Y2D5 859 aa9.75□□□□□ -0.85
ERCC8-202ENST00000381118 PNPLA7Q6ZV29 1317 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 A0A1B0GUL6 1792 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 SNAP23O00161 211 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 PDE8BO95263 885 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 SF3B3Q15393 1217 aaKnown RBP9.74□□□□□ -0.85
ERCC8-202ENST00000381118 ATP2B3Q16720 1220 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 ANKRD18AQ8IVF6 992 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 CELF1Q92879 486 aaKnown RBP9.74□□□□□ -0.85
ERCC8-202ENST00000381118 XAGE2Q96GT9 111 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 CDC5LQ99459 802 aaKnown RBP9.74□□□□□ -0.85
ERCC8-202ENST00000381118 GPR108Q9NPR9 543 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 CHMLP26374 656 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 TM4SF1P30408 202 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 DDR1Q08345 913 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 VGLL2Q8N8G2 317 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 TBC1D32Q96NH3 1257 aa9.74□□□□□ -0.85
ERCC8-202ENST00000381118 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
ERCC8-202ENST00000381118 MROH5Q6ZUA9 1318 aa9.73□□□□□ -0.85
ERCC8-202ENST00000381118 POLRMTO00411 1230 aaKnown RBP9.73□□□□□ -0.85
ERCC8-202ENST00000381118 ATP5JP18859 108 aa9.73□□□□□ -0.85
ERCC8-202ENST00000381118 BAG6P46379 1132 aa9.73□□□□□ -0.85
ERCC8-202ENST00000381118 ST5P78524 1137 aa9.73□□□□□ -0.85
ERCC8-202ENST00000381118 CHRNDQ07001 517 aa9.73□□□□□ -0.85
ERCC8-202ENST00000381118 EVI5LQ96CN4 794 aa9.73□□□□□ -0.85
ERCC8-202ENST00000381118 SLC15A2Q16348 729 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 CCDC158Q5M9N0 1113 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 TTC39AQ5SRH9 613 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
ERCC8-202ENST00000381118 DDX46Q7L014 1031 aaKnown RBP9.72□□□□□ -0.85
ERCC8-202ENST00000381118 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 IL25Q9H293 177 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 IFIT1P09914 478 aaKnown RBP9.72□□□□□ -0.85
ERCC8-202ENST00000381118 FLAD1Q8NFF5 587 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 ESYT1Q9BSJ8 1104 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 STK32BQ9NY57 414 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 MYO5AQ9Y4I1 1855 aaKnown RBP9.72□□□□□ -0.85
ERCC8-202ENST00000381118 ARAP2Q8WZ64 1704 aa9.72□□□□□ -0.85
ERCC8-202ENST00000381118 FKBP4Q02790 459 aaKnown RBP eCLIP9.71□□□□□ -0.85
ERCC8-202ENST00000381118 PUM3Q15397 648 aaKnown RBP9.71□□□□□ -0.85
ERCC8-202ENST00000381118 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.85
ERCC8-202ENST00000381118 SNRKQ9NRH2 765 aa9.71□□□□□ -0.85
ERCC8-202ENST00000381118 DIAPH3Q9NSV4 1193 aa9.71□□□□□ -0.85
ERCC8-202ENST00000381118 AKAP11Q9UKA4 1901 aa9.71□□□□□ -0.85
ERCC8-202ENST00000381118 CACNA1SQ13698 1873 aa9.71□□□□□ -0.85
ERCC8-202ENST00000381118 ANKRD31Q8N7Z5 1873 aa9.71□□□□□ -0.85
ERCC8-202ENST00000381118 WTIPA6NIX2 430 aaPredicted RBP9.71□□□□□ -0.86
ERCC8-202ENST00000381118 GOLIM4O00461 696 aa9.71□□□□□ -0.86
ERCC8-202ENST00000381118 NPM3O75607 178 aaKnown RBP9.71□□□□□ -0.86
ERCC8-202ENST00000381118 MMP10P09238 476 aa9.71□□□□□ -0.86
ERCC8-202ENST00000381118 RPS8P62241 208 aaKnown RBP9.71□□□□□ -0.86
ERCC8-202ENST00000381118 SLC51AQ86UW1 340 aa9.71□□□□□ -0.86
ERCC8-202ENST00000381118 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
ERCC8-202ENST00000381118 HAUS7Q99871 368 aa9.71□□□□□ -0.86
ERCC8-202ENST00000381118 ANO2Q9NQ90 1003 aa9.71□□□□□ -0.86
ERCC8-202ENST00000381118 BSDC1Q9NW68 430 aaPredicted RBP9.71□□□□□ -0.86
ERCC8-202ENST00000381118 REC8O95072 547 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 CHGBP05060 677 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 SCARF1Q14162 830 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 PI16Q6UXB8 463 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 LPIN2Q92539 896 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
ERCC8-202ENST00000381118 PDGFDQ9GZP0 370 aaPredicted RBP9.7□□□□□ -0.86
ERCC8-202ENST00000381118 PAG1Q9NWQ8 432 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 MINPP1Q9UNW1 487 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 MYH7P12883 1935 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 SLC5A1P13866 664 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 FGFR2P21802 821 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 PHKA1P46020 1223 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 FAM227BQ96M60 508 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 USP26Q9BXU7 913 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 ANTXR1Q9H6X2 564 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 PARP3Q9Y6F1 533 aa9.7□□□□□ -0.86
ERCC8-202ENST00000381118 QSER1Q2KHR3 1735 aa9.69□□□□□ -0.86
ERCC8-202ENST00000381118 NRXN2Q9P2S2 1712 aa9.69□□□□□ -0.86
ERCC8-202ENST00000381118 RBM25P49756 843 aaKnown RBP9.69□□□□□ -0.86
ERCC8-202ENST00000381118 CCDC102BQ68D86 513 aa9.69□□□□□ -0.86
ERCC8-202ENST00000381118 SGSM2O43147 1006 aa9.68□□□□□ -0.86
ERCC8-202ENST00000381118 MCAMP43121 646 aa9.68□□□□□ -0.86
ERCC8-202ENST00000381118 SLC4A3P48751 1232 aa9.68□□□□□ -0.86
ERCC8-202ENST00000381118 NMIQ13287 307 aaPredicted RBP9.68□□□□□ -0.86
ERCC8-202ENST00000381118 GRAPQ13588 217 aa9.68□□□□□ -0.86
ERCC8-202ENST00000381118 SLFNL1Q499Z3 407 aa9.68□□□□□ -0.86
ERCC8-202ENST00000381118 GRAPLQ8TC17 118 aaPredicted RBP9.68□□□□□ -0.86
ERCC8-202ENST00000381118 MYH13Q9UKX3 1938 aa9.68□□□□□ -0.86
ERCC8-202ENST00000381118 A0A0D9SFI3 127 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms