RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 EZH2Q15910 746 aaKnown RBP9.48□□□□□ -0.89
CDKL5-202ENST00000379996 HLFQ16534 295 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 NLRP10Q86W26 655 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 ZBTB38Q8NAP3 1195 aaPredicted RBP9.48□□□□□ -0.89
CDKL5-202ENST00000379996 CCDC102AQ96A19 550 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 MYD88Q99836 296 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 PIP4K2AP48426 406 aaPredicted RBP9.48□□□□□ -0.89
CDKL5-202ENST00000379996 AIMP1Q12904 312 aaKnown RBP9.48□□□□□ -0.89
CDKL5-202ENST00000379996 SLC15A2Q16348 729 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 ZMYND15Q9H091 742 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 CARMIL3Q8ND23 1372 aa9.48□□□□□ -0.89
CDKL5-202ENST00000379996 UBN2Q6ZU65 1347 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 OSBPL3Q9H4L5 887 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 LRRC37AA6NMS7 1700 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 GNAI2P04899 355 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 HSP90B1P14625 803 aaKnown RBP9.47□□□□□ -0.89
CDKL5-202ENST00000379996 SLC10A5Q5PT55 438 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 ANKRD45Q5TZF3 282 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 SMYD5Q6GMV2 418 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 FAM43AQ8N2R8 423 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 TNRC6CQ9HCJ0 1690 aaKnown RBP9.47□□□□□ -0.89
CDKL5-202ENST00000379996 TM4SF1P30408 202 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
CDKL5-202ENST00000379996 MEIS3Q99687 375 aa9.47□□□□□ -0.89
CDKL5-202ENST00000379996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.46□□□□□ -0.89
CDKL5-202ENST00000379996 NTSR2O95665 410 aa9.46□□□□□ -0.89
CDKL5-202ENST00000379996 XRCC6P12956 609 aaKnown RBP eCLIP9.46□□□□□ -0.89
CDKL5-202ENST00000379996 ZBTB3Q9H5J0 574 aa9.46□□□□□ -0.89
CDKL5-202ENST00000379996 STK32BQ9NY57 414 aa9.46□□□□□ -0.89
CDKL5-202ENST00000379996 ARAP2Q8WZ64 1704 aa9.46□□□□□ -0.89
CDKL5-202ENST00000379996 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 GYS1P13807 737 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 SLC4A10Q6U841 1118 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 SLC16A10Q8TF71 515 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 NYXQ9GZU5 481 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 ZPR1O75312 459 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 UBTFL1P0CB47 393 aaPredicted RBP9.46□□□□□ -0.9
CDKL5-202ENST00000379996 RFC4P35249 363 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 CWF19L2Q2TBE0 894 aaKnown RBP9.46□□□□□ -0.9
CDKL5-202ENST00000379996 PPP1R42Q7Z4L9 355 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.9
CDKL5-202ENST00000379996 TNPO1Q92973 898 aaKnown RBP9.46□□□□□ -0.9
CDKL5-202ENST00000379996 KAZALD1Q96I82 304 aa9.46□□□□□ -0.9
CDKL5-202ENST00000379996 CDC45O75419 566 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 CSF1RP07333 972 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 KCNQ4P56696 695 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 PARP9Q8IXQ6 854 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 TBC1D2BQ9UPU7 963 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 USPL1Q5W0Q7 1092 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 SSH3Q8TE77 659 aa9.45□□□□□ -0.9
CDKL5-202ENST00000379996 NBPF7P0C2Y1 421 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 FOXO4P98177 505 aa9.44□□□□□ -0.9
CDKL5-202ENST00000379996 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 HSCBQ8IWL3 235 aa9.44□□□□□ -0.9
CDKL5-202ENST00000379996 C16orf71Q8IYS4 520 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 NLGN1Q8N2Q7 840 aa9.44□□□□□ -0.9
CDKL5-202ENST00000379996 UTP14AQ9BVJ6 771 aaKnown RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 KLRG2A4D1S0 409 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 TRAK2O60296 914 aa9.44□□□□□ -0.9
CDKL5-202ENST00000379996 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
CDKL5-202ENST00000379996 C9orf78Q9NZ63 289 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-202ENST00000379996 SUSD4Q5VX71 490 aa9.43□□□□□ -0.9
CDKL5-202ENST00000379996 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
CDKL5-202ENST00000379996 RRAGDQ9NQL2 400 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-202ENST00000379996 TFCP2L1Q9NZI6 479 aa9.43□□□□□ -0.9
CDKL5-202ENST00000379996 SH3TC1Q8TE82 1336 aa9.43□□□□□ -0.9
CDKL5-202ENST00000379996 COL11A2P13942 1736 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-202ENST00000379996 CCDC82Q8N4S0 544 aa9.43□□□□□ -0.9
CDKL5-202ENST00000379996 LTBP1Q14766 1721 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 DDX11L8A8MPP1 907 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 POLRMTO00411 1230 aaKnown RBP9.42□□□□□ -0.9
CDKL5-202ENST00000379996 PDE8AO60658 829 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 HMMRO75330 724 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 SRP68Q9UHB9 627 aaKnown RBP9.42□□□□□ -0.9
CDKL5-202ENST00000379996 NIP7Q9Y221 180 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDKL5-202ENST00000379996 LRRFIP2Q9Y608 721 aaKnown RBP9.42□□□□□ -0.9
CDKL5-202ENST00000379996 ATP5J2-PTCD1G3V325 749 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 SDSP20132 328 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-202ENST00000379996 SF3B3Q15393 1217 aaKnown RBP9.42□□□□□ -0.9
CDKL5-202ENST00000379996 L1TD1Q5T7N2 865 aaKnown RBP9.42□□□□□ -0.9
CDKL5-202ENST00000379996 DEFB132Q7Z7B7 95 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 SETDB2Q96T68 719 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 C10orf71Q711Q0 1435 aa9.42□□□□□ -0.9
CDKL5-202ENST00000379996 NFIXQ14938 502 aa9.41□□□□□ -0.9
CDKL5-202ENST00000379996 PANK2Q9BZ23 570 aa9.41□□□□□ -0.9
CDKL5-202ENST00000379996 COPRSQ9NQ92 184 aa9.41□□□□□ -0.9
CDKL5-202ENST00000379996 ISY1Q9ULR0 285 aaKnown RBP9.41□□□□□ -0.9
CDKL5-202ENST00000379996 CIAO1O76071 339 aa9.41□□□□□ -0.9
CDKL5-202ENST00000379996 GAS2L3Q86XJ1 694 aa9.41□□□□□ -0.9
CDKL5-202ENST00000379996 BICC1Q9H694 974 aaKnown RBP9.41□□□□□ -0.9
CDKL5-202ENST00000379996 BRCA1P38398 1863 aaKnown RBP9.41□□□□□ -0.9
CDKL5-202ENST00000379996 CTSWP56202 376 aa9.4□□□□□ -0.9
CDKL5-202ENST00000379996 CRY2Q49AN0 593 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms