RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 DHX40Q8IX18 779 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 RHPN1Q8TCX5 695 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 HNRNPLLQ8WVV9 542 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 MRPS27Q92552 414 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 XPO4Q9C0E2 1151 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 CXorf56Q9H5V9 222 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 KIF5CO60282 957 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 LARGE1O95461 756 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 CHMP4BP1P59074 171 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 CFAP100Q494V2 611 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 CREB3L3Q68CJ9 461 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 FAM177A1Q8N128 213 aaPredicted RBP8.37□□□□□ -1.07
DDX58-202ENST00000379883 LCMT1Q9UIC8 334 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 HOOK1Q9UJC3 728 aaKnown RBP8.37□□□□□ -1.07
DDX58-202ENST00000379883 ABCC1P33527 1531 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 H0YHG0 523 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 EBAG9O00559 213 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 KIAA0754O94854 1291 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 SLC3A2P08195 630 aaKnown RBP8.37□□□□□ -1.07
DDX58-202ENST00000379883 UBASH3AP57075 661 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 CEBPZQ03701 1054 aaKnown RBP8.37□□□□□ -1.07
DDX58-202ENST00000379883 CT47A1Q5JQC4 288 aaPredicted RBP8.37□□□□□ -1.07
DDX58-202ENST00000379883 FBXW7Q969H0 707 aa8.37□□□□□ -1.07
DDX58-202ENST00000379883 LLPHQ9BRT6 129 aaKnown RBP8.37□□□□□ -1.07
DDX58-202ENST00000379883 A6NNZ2 444 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 TUBB8Q3ZCM7 444 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 NAA16Q6N069 864 aaPredicted RBP8.36□□□□□ -1.07
DDX58-202ENST00000379883 CCDC70Q6NSX1 233 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 FAM173BQ6P4H8 233 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 UNC5CLQ8IV45 518 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 AFAP1L1Q8TED9 768 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 CCDC12Q8WUD4 166 aaPredicted RBP8.36□□□□□ -1.07
DDX58-202ENST00000379883 FMNL2Q96PY5 1086 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 FUT8Q9BYC5 575 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 TPCN1Q9ULQ1 816 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 RBM8AQ9Y5S9 174 aaKnown RBP8.36□□□□□ -1.07
DDX58-202ENST00000379883 F6X3S4 739 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 CPP00450 1065 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 CPA1P15085 419 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 PSEN1P49768 467 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 PIP4K2BP78356 416 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 SMARCC1Q92922 1105 aaPredicted RBP8.36□□□□□ -1.07
DDX58-202ENST00000379883 PGBD1Q96JS3 809 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 PDE11AQ9HCR9 933 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 RNF216Q9NWF9 866 aaPredicted RBP8.36□□□□□ -1.07
DDX58-202ENST00000379883 CABP1Q9NZU7 370 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 RCOR1Q9UKL0 485 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 FAM83GA6ND36 823 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 RPS6KB1P23443 525 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 DCTN1Q14203 1278 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 STK38Q15208 465 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 PDILTQ8N807 584 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 BRF1Q92994 677 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 CDK19Q9BWU1 502 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 TULP4Q9NRJ4 1543 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 ERBB3P21860 1342 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 IKBKBO14920 756 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 NLRP12P59046 1061 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 MAP3K9P80192 1104 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 FANCCQ00597 558 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 STK3Q13188 491 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 GBP6Q6ZN66 633 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 KCNB2Q92953 911 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 ATG3Q9NT62 314 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 PPP2R2CQ9Y2T4 447 aa8.36□□□□□ -1.07
DDX58-202ENST00000379883 ZC3H13Q5T200 1668 aaKnown RBP8.35□□□□□ -1.07
DDX58-202ENST00000379883 CDK12Q9NYV4 1490 aaPredicted RBP8.35□□□□□ -1.07
DDX58-202ENST00000379883 ADGRB3O60242 1522 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 ARMCX5Q6P1M9 558 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 MICALCLQ6ZW33 695 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 SRGAP1Q7Z6B7 1085 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 ECHDC1Q9NTX5 307 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 FLIIQ13045 1269 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 REXO1L1PQ8IX06 675 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 MRFAP1Q9Y605 127 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 GLI2P10070 1586 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 MAP3K5Q99683 1374 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 SOX12O15370 315 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 HMGB1P09429 215 aaKnown RBP8.35□□□□□ -1.07
DDX58-202ENST00000379883 RESTQ13127 1097 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 KCNG4Q8TDN1 519 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 SSH3Q8TE77 659 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 BAG1Q99933 345 aaPredicted RBP8.35□□□□□ -1.07
DDX58-202ENST00000379883 DEPDC5O75140 1603 aa8.35□□□□□ -1.07
DDX58-202ENST00000379883 FRMPD1Q5SYB0 1578 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 PNMA6EA0A0J9YXQ4 647 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 SATB1Q01826 763 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 SYNE3Q6ZMZ3 975 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 SPATS2Q86XZ4 545 aaKnown RBP8.34□□□□□ -1.07
DDX58-202ENST00000379883 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 CTAGE15A4D2H0 777 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 SASH3O75995 380 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 CCDC175P0C221 793 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 CTAGE8P0CG41 777 aa8.34□□□□□ -1.07
DDX58-202ENST00000379883 RSRC2Q7L4I2 434 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms