RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PRAM1Q96QH2 718 aa15.05■□□□□ -0
HIPK3-202ENST00000379016 ATP6V0A2Q9Y487 856 aa15.05■□□□□ -0
HIPK3-202ENST00000379016 KRT5P13647 590 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 ZNF131P52739 623 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 UBLCP1Q8WVY7 318 aaPredicted RBP15.04■□□□□ -0
HIPK3-202ENST00000379016 RSRC1Q96IZ7 334 aaKnown RBP15.04■□□□□ -0
HIPK3-202ENST00000379016 RUFY3Q7L099 469 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 GCC1Q96CN9 775 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 MX2P20592 715 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 TTC31Q49AM3 519 aaPredicted RBP15.04■□□□□ -0
HIPK3-202ENST00000379016 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 C10orf67Q8IYJ2 551 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
HIPK3-202ENST00000379016 SUFUQ9UMX1 484 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 AFMP43652 599 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 LACTBP83111 547 aaPredicted RBP15.04■□□□□ -0
HIPK3-202ENST00000379016 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 SPATA17Q96L03 361 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 NOD1Q9Y239 953 aa15.04■□□□□ -0
HIPK3-202ENST00000379016 F8W031 263 aaPredicted RBP15.03■□□□□ -0
HIPK3-202ENST00000379016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.03■□□□□ -0
HIPK3-202ENST00000379016 MAN1A1P33908 653 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 PPFIA1Q13136 1202 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 AKAP2Q9Y2D5 859 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 ESPNB1AK53 854 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 HLA-DOAP06340 250 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 KCNA4P22459 653 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 CALCOCO2Q13137 446 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
HIPK3-202ENST00000379016 CLUL1Q15846 466 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 LUC7L2Q9Y383 392 aaKnown RBP15.03■□□□□ -0
HIPK3-202ENST00000379016 HARSP12081 509 aaKnown RBP15.03■□□□□ -0
HIPK3-202ENST00000379016 N4BP3O15049 544 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 TSTA3Q13630 321 aaPredicted RBP15.03■□□□□ -0
HIPK3-202ENST00000379016 CCDC183Q5T5S1 534 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 ATP2A3Q93084 1043 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 IL1RL1Q01638 556 aa15.03■□□□□ -0
HIPK3-202ENST00000379016 SF3A3Q12874 501 aaKnown RBP eCLIP15.03■□□□□ -0
HIPK3-202ENST00000379016 SPECC1L-ADORA2AF8WAN1 911 aa15.02■□□□□ -0
HIPK3-202ENST00000379016 CCDC122Q5T0U0 273 aa15.02■□□□□ -0
HIPK3-202ENST00000379016 CACNA2D3Q8IZS8 1091 aa15.02■□□□□ -0
HIPK3-202ENST00000379016 FAM204AQ9H8W3 233 aa15.02■□□□□ -0
HIPK3-202ENST00000379016 SLC5A1P13866 664 aa15.02□□□□□ -0.01
HIPK3-202ENST00000379016 ZBED9Q6R2W3 1325 aa15.02□□□□□ -0.01
HIPK3-202ENST00000379016 SAMD15Q9P1V8 674 aa15.02□□□□□ -0.01
HIPK3-202ENST00000379016 PRPHP41219 470 aa15.02□□□□□ -0.01
HIPK3-202ENST00000379016 RBM26Q5T8P6 1007 aaKnown RBP15.02□□□□□ -0.01
HIPK3-202ENST00000379016 PRPF40BQ6NWY9 871 aaKnown RBP15.02□□□□□ -0.01
HIPK3-202ENST00000379016 ANLNQ9NQW6 1124 aa15.02□□□□□ -0.01
HIPK3-202ENST00000379016 AFAP1L2Q8N4X5 818 aa15.01□□□□□ -0.01
HIPK3-202ENST00000379016 SYF2O95926 243 aaKnown RBP15.01□□□□□ -0.01
HIPK3-202ENST00000379016 STAT6P42226 847 aa15.01□□□□□ -0.01
HIPK3-202ENST00000379016 SETSIPP0DME0 302 aa15.01□□□□□ -0.01
HIPK3-202ENST00000379016 ANKRD24Q8TF21 1146 aa15.01□□□□□ -0.01
HIPK3-202ENST00000379016 JARID2Q92833 1246 aaPredicted RBP15.01□□□□□ -0.01
HIPK3-202ENST00000379016 CCT6AP40227 531 aaKnown RBP15.01□□□□□ -0.01
HIPK3-202ENST00000379016 LPXNO60711 386 aa15.01□□□□□ -0.01
HIPK3-202ENST00000379016 MCM7P33993 719 aa15.01□□□□□ -0.01
HIPK3-202ENST00000379016 MSANTD4Q8NCY6 345 aa15.01□□□□□ -0.01
HIPK3-202ENST00000379016 GPTP24298 496 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 CASC4Q6P4E1 433 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 BZW2Q9Y6E2 419 aaKnown RBP15□□□□□ -0.01
HIPK3-202ENST00000379016 SMARCA5O60264 1052 aaPredicted RBP15□□□□□ -0.01
HIPK3-202ENST00000379016 SLC9A5Q14940 896 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 PLCB4Q15147 1175 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 TMEM67Q5HYA8 995 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 TCP11L2Q8N4U5 519 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 HVCN1Q96D96 273 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 GOLGA1Q92805 767 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 ANO3Q9BYT9 981 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 TFIP11Q9UBB9 837 aaKnown RBP15□□□□□ -0.01
HIPK3-202ENST00000379016 ZRANB2O95218 330 aaKnown RBP eCLIP15□□□□□ -0.013e-6■■■■■ 33.8
HIPK3-202ENST00000379016 RPS6KA2Q15349 733 aa15□□□□□ -0.01
HIPK3-202ENST00000379016 FOXD4Q12950 439 aaPredicted RBP14.99□□□□□ -0.01
HIPK3-202ENST00000379016 SLC26A6Q9BXS9 759 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 ESYT2A0FGR8 921 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 ERMNQ8TAM6 284 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 LIMCH1Q9UPQ0 1083 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 ZNF644Q9H582 1327 aaPredicted RBP14.99□□□□□ -0.01
HIPK3-202ENST00000379016 GBP1P32455 592 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 TTC30BQ8N4P2 665 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 EHBP1Q8NDI1 1231 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 DHX57Q6P158 1386 aaKnown RBP14.99□□□□□ -0.01
HIPK3-202ENST00000379016 CETN3O15182 167 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 RNF217Q8TC41 542 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 ZC4H2Q9NQZ6 224 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 STX8Q9UNK0 236 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 IRX3P78415 501 aaPredicted RBP14.99□□□□□ -0.01
HIPK3-202ENST00000379016 AMOTQ4VCS5 1084 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 HEATR3Q7Z4Q2 680 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 JAKMIP2Q96AA8 810 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 GINS2Q9Y248 185 aa14.99□□□□□ -0.01
HIPK3-202ENST00000379016 GBP6Q6ZN66 633 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 USP25Q9UHP3 1055 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 RBBP5Q15291 538 aaKnown RBP14.98□□□□□ -0.01
HIPK3-202ENST00000379016 ACBD5Q5T8D3 534 aaPredicted RBP14.98□□□□□ -0.01
HIPK3-202ENST00000379016 SKA2Q8WVK7 121 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms