RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 DUSP27Q5VZP5 1158 aa25.45■■□□□ 1.66
CCDC107-202ENST00000378406 TBC1D16Q8TBP0 767 aa25.45■■□□□ 1.66
CCDC107-202ENST00000378406 EYA3Q99504 573 aa25.45■■□□□ 1.66
CCDC107-202ENST00000378406 SCN9AQ15858 1988 aa25.44■■□□□ 1.66
CCDC107-202ENST00000378406 RPS8P62241 208 aaKnown RBP25.44■■□□□ 1.66
CCDC107-202ENST00000378406 CFAP44Q96MT7 982 aa25.44■■□□□ 1.66
CCDC107-202ENST00000378406 GBA2Q9HCG7 927 aaPredicted RBP25.44■■□□□ 1.66
CCDC107-202ENST00000378406 FAM155AB1AL88 458 aaPredicted RBP25.43■■□□□ 1.66
CCDC107-202ENST00000378406 ADM5C9JUS6 153 aa25.43■■□□□ 1.66
CCDC107-202ENST00000378406 RBM26Q5T8P6 1007 aaKnown RBP25.43■■□□□ 1.66
CCDC107-202ENST00000378406 DCPSQ96C86 337 aaKnown RBP25.43■■□□□ 1.66
CCDC107-202ENST00000378406 WDR43Q15061 677 aaKnown RBP eCLIP25.42■■□□□ 1.66
CCDC107-202ENST00000378406 RGMBQ6NW40 437 aa25.42■■□□□ 1.66
CCDC107-202ENST00000378406 MBIPQ9NS73 344 aa25.42■■□□□ 1.66
CCDC107-202ENST00000378406 ADAMTS8Q9UP79 889 aa25.42■■□□□ 1.66
CCDC107-202ENST00000378406 ZBTB38Q8NAP3 1195 aaPredicted RBP25.41■■□□□ 1.66
CCDC107-202ENST00000378406 SEC31BQ9NQW1 1179 aa25.41■■□□□ 1.66
CCDC107-202ENST00000378406 PODXL2Q9NZ53 605 aa25.41■■□□□ 1.66
CCDC107-202ENST00000378406 VIL1P09327 827 aaKnown RBP25.4■■□□□ 1.66
CCDC107-202ENST00000378406 DGKZQ13574 1117 aa25.4■■□□□ 1.66
CCDC107-202ENST00000378406 KIF4BQ2VIQ3 1234 aa25.4■■□□□ 1.66
CCDC107-202ENST00000378406 C2orf69Q8N8R5 385 aa25.4■■□□□ 1.66
CCDC107-202ENST00000378406 ZC3H12CQ9C0D7 883 aaKnown RBP25.4■■□□□ 1.66
CCDC107-202ENST00000378406 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.66
CCDC107-202ENST00000378406 SLC34A2O95436 690 aa25.38■■□□□ 1.65
CCDC107-202ENST00000378406 CCDC102AQ96A19 550 aa25.38■■□□□ 1.65
CCDC107-202ENST00000378406 PHAXQ9H814 394 aaKnown RBP25.38■■□□□ 1.65
CCDC107-202ENST00000378406 GGA3Q9NZ52 723 aa25.38■■□□□ 1.65
CCDC107-202ENST00000378406 ASTN2O75129 1339 aaPredicted RBP25.37■■□□□ 1.65
CCDC107-202ENST00000378406 UFL1O94874 794 aa25.37■■□□□ 1.65
CCDC107-202ENST00000378406 ZNF853P0CG23 659 aa25.37■■□□□ 1.65
CCDC107-202ENST00000378406 GOLGA2Q08379 1002 aa25.37■■□□□ 1.65
CCDC107-202ENST00000378406 KIF23Q02241 960 aaPredicted RBP25.36■■□□□ 1.65
CCDC107-202ENST00000378406 SULF1Q8IWU6 871 aa25.36■■□□□ 1.65
CCDC107-202ENST00000378406 SAGE1Q9NXZ1 904 aa25.36■■□□□ 1.65
CCDC107-202ENST00000378406 ANKIB1Q9P2G1 1089 aa25.36■■□□□ 1.65
CCDC107-202ENST00000378406 ZNF609O15014 1411 aa25.36■■□□□ 1.65
CCDC107-202ENST00000378406 ZNF157P51786 506 aaPredicted RBP25.35■■□□□ 1.65
CCDC107-202ENST00000378406 MYD88Q99836 296 aa25.35■■□□□ 1.65
CCDC107-202ENST00000378406 GGA1Q9UJY5 639 aa25.35■■□□□ 1.65
CCDC107-202ENST00000378406 PCCAP05165 728 aaPredicted RBP25.34■■□□□ 1.65
CCDC107-202ENST00000378406 HSP90B1P14625 803 aaKnown RBP25.34■■□□□ 1.65
CCDC107-202ENST00000378406 ZNF280AP59817 542 aaPredicted RBP25.34■■□□□ 1.65
CCDC107-202ENST00000378406 CCDC191Q8NCU4 936 aa25.34■■□□□ 1.65
CCDC107-202ENST00000378406 PSME4Q14997 1843 aa25.34■■□□□ 1.65
CCDC107-202ENST00000378406 G3V3G9 751 aa25.33■■□□□ 1.65
CCDC107-202ENST00000378406 PDE8AO60658 829 aa25.33■■□□□ 1.65
CCDC107-202ENST00000378406 SLC10A3P09131 477 aa25.33■■□□□ 1.65
CCDC107-202ENST00000378406 CCDC152Q4G0S7 254 aa25.33■■□□□ 1.65
CCDC107-202ENST00000378406 DCAF8Q5TAQ9 597 aa25.33■■□□□ 1.65
CCDC107-202ENST00000378406 RSBN1LQ6PCB5 846 aaPredicted RBP25.33■■□□□ 1.65
CCDC107-202ENST00000378406 CDCA5Q96FF9 252 aa25.33■■□□□ 1.65
CCDC107-202ENST00000378406 ELL2O00472 640 aaPredicted RBP25.32■■□□□ 1.64
CCDC107-202ENST00000378406 AGBL3Q8NEM8 1001 aa25.32■■□□□ 1.64
CCDC107-202ENST00000378406 JARID2Q92833 1246 aaPredicted RBP25.32■■□□□ 1.64
CCDC107-202ENST00000378406 IFT57Q9NWB7 429 aa25.32■■□□□ 1.64
CCDC107-202ENST00000378406 RNF186Q9NXI6 227 aa25.32■■□□□ 1.64
CCDC107-202ENST00000378406 ANGEL2Q5VTE6 544 aaKnown RBP25.31■■□□□ 1.64
CCDC107-202ENST00000378406 CCDC85AQ96PX6 553 aaPredicted RBP25.31■■□□□ 1.64
CCDC107-202ENST00000378406 GMLQ99445 158 aa25.31■■□□□ 1.64
CCDC107-202ENST00000378406 AKAP11Q9UKA4 1901 aa25.31■■□□□ 1.64
CCDC107-202ENST00000378406 TRPA1O75762 1119 aa25.3■■□□□ 1.64
CCDC107-202ENST00000378406 SCARF1Q14162 830 aa25.3■■□□□ 1.64
CCDC107-202ENST00000378406 CSRNP1Q96S65 589 aa25.3■■□□□ 1.64
CCDC107-202ENST00000378406 CWC25Q9NXE8 425 aaPredicted RBP25.3■■□□□ 1.64
CCDC107-202ENST00000378406 GNAI1P63096 354 aa25.29■■□□□ 1.64
CCDC107-202ENST00000378406 METTL22Q9BUU2 404 aaPredicted RBP25.29■■□□□ 1.64
CCDC107-202ENST00000378406 XDHP47989 1333 aa25.29■■□□□ 1.64
CCDC107-202ENST00000378406 ANKRD18AQ8IVF6 992 aa25.28■■□□□ 1.64
CCDC107-202ENST00000378406 C8orf58Q8NAV2 365 aa25.28■■□□□ 1.64
CCDC107-202ENST00000378406 APAF1O14727 1248 aa25.27■■□□□ 1.64
CCDC107-202ENST00000378406 USP17L8P0C7I0 530 aa25.27■■□□□ 1.64
CCDC107-202ENST00000378406 RASAL3Q86YV0 1011 aa25.27■■□□□ 1.64
CCDC107-202ENST00000378406 MYOZ2Q9NPC6 264 aa25.27■■□□□ 1.64
CCDC107-202ENST00000378406 TNRC18O15417 2968 aaPredicted RBP25.26■■□□□ 1.63
CCDC107-202ENST00000378406 ATP2B4P23634 1241 aa25.26■■□□□ 1.63
CCDC107-202ENST00000378406 CALD1Q05682 793 aaKnown RBP25.26■■□□□ 1.63
CCDC107-202ENST00000378406 PODNQ7Z5L7 613 aa25.26■■□□□ 1.63
CCDC107-202ENST00000378406 PAPPA2Q9BXP8 1791 aa25.26■■□□□ 1.63
CCDC107-202ENST00000378406 USP17L3A6NCW0 530 aa25.25■■□□□ 1.63
CCDC107-202ENST00000378406 USP17L4A6NCW7 530 aa25.25■■□□□ 1.63
CCDC107-202ENST00000378406 WTIPA6NIX2 430 aaPredicted RBP25.25■■□□□ 1.63
CCDC107-202ENST00000378406 FKBP1BP68106 108 aa25.25■■□□□ 1.63
CCDC107-202ENST00000378406 USP17L1Q7RTZ2 530 aa25.25■■□□□ 1.63
CCDC107-202ENST00000378406 PITPNM2Q9BZ72 1349 aa25.25■■□□□ 1.63
CCDC107-202ENST00000378406 DDX58O95786 925 aaKnown RBP25.24■■□□□ 1.63
CCDC107-202ENST00000378406 CTSWP56202 376 aa25.24■■□□□ 1.63
CCDC107-202ENST00000378406 MAP3K2Q9Y2U5 619 aa25.24■■□□□ 1.63
CCDC107-202ENST00000378406 CCDC30Q5VVM6 783 aa25.23■■□□□ 1.63
CCDC107-202ENST00000378406 REM2Q8IYK8 340 aaPredicted RBP25.23■■□□□ 1.63
CCDC107-202ENST00000378406 SCAF8Q9UPN6 1271 aaKnown RBP25.23■■□□□ 1.63
CCDC107-202ENST00000378406 IGKV5-2P06315 115 aa25.22■■□□□ 1.63
CCDC107-202ENST00000378406 CDC5LQ99459 802 aaKnown RBP25.22■■□□□ 1.63
CCDC107-202ENST00000378406 PRKRIP1Q9H875 184 aaPredicted RBP25.22■■□□□ 1.63
CCDC107-202ENST00000378406 ZNF646O15015 1829 aaPredicted RBP25.21■■□□□ 1.63
CCDC107-202ENST00000378406 MED23Q9ULK4 1368 aa25.21■■□□□ 1.63
CCDC107-202ENST00000378406 MOB2Q70IA6 237 aa25.21■■□□□ 1.63
CCDC107-202ENST00000378406 TTLL11Q8NHH1 800 aa25.21■■□□□ 1.63
CCDC107-202ENST00000378406 MINPP1Q9UNW1 487 aa25.21■■□□□ 1.63
CCDC107-202ENST00000378406 MYH3P11055 1940 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms