RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SCN4AP35499 1836 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 SPEF2Q9C093 1822 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 ITGA6P23229 1130 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 CIAPIN1Q6FI81 312 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 LDHDQ86WU2 507 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 MPHOSPH8Q99549 860 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 ZC3H12CQ9C0D7 883 aaKnown RBP14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 GRM8O00222 908 aa14.65□□□□□ -0.06
SMARCE1-203ENST00000377808 CASP7P55210 303 aa14.65□□□□□ -0.06
SMARCE1-203ENST00000377808 CXCL9Q07325 125 aa14.65□□□□□ -0.06
SMARCE1-203ENST00000377808 TNIP1Q15025 636 aa14.65□□□□□ -0.06
SMARCE1-203ENST00000377808 PNMA8AQ86V59 439 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-203ENST00000377808 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
SMARCE1-203ENST00000377808 PTPRCP08575 1304 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 XDHP47989 1333 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 ANKRD18BA2A2Z9 1011 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 YDJCA8MPS7 323 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 ECE2O60344 883 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 EPS15P42566 896 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 GMPSP49915 693 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 SCNN1DP51172 638 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 HNRNPUQ00839 825 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 BSDC1Q9NW68 430 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 PODXL2Q9NZ53 605 aa14.64□□□□□ -0.07
SMARCE1-203ENST00000377808 RTL9Q8NET4 1388 aa14.63□□□□□ -0.07
SMARCE1-203ENST00000377808 ATP2B4P23634 1241 aa14.63□□□□□ -0.07
SMARCE1-203ENST00000377808 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
SMARCE1-203ENST00000377808 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
SMARCE1-203ENST00000377808 IFIT5Q13325 482 aaKnown RBP14.62□□□□□ -0.07
SMARCE1-203ENST00000377808 LMBR1LQ6UX01 489 aa14.62□□□□□ -0.07
SMARCE1-203ENST00000377808 TRMT2AQ8IZ69 625 aaKnown RBP14.62□□□□□ -0.07
SMARCE1-203ENST00000377808 GPRC5DQ9NZD1 345 aa14.62□□□□□ -0.07
SMARCE1-203ENST00000377808 MINPP1Q9UNW1 487 aa14.62□□□□□ -0.07
SMARCE1-203ENST00000377808 LTBP1Q14766 1721 aa14.62□□□□□ -0.07
SMARCE1-203ENST00000377808 PSMD14O00487 310 aa14.61□□□□□ -0.07
SMARCE1-203ENST00000377808 CSF1RP07333 972 aa14.61□□□□□ -0.07
SMARCE1-203ENST00000377808 CT47B1P0C2W7 299 aaPredicted RBP14.61□□□□□ -0.07
SMARCE1-203ENST00000377808 KCNJ4P48050 445 aa14.61□□□□□ -0.07
SMARCE1-203ENST00000377808 FOXO4P98177 505 aa14.61□□□□□ -0.07
SMARCE1-203ENST00000377808 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
SMARCE1-203ENST00000377808 ZBTB12Q9Y330 459 aaPredicted RBP14.61□□□□□ -0.07
SMARCE1-203ENST00000377808 CCT4P50991 539 aaKnown RBP14.6□□□□□ -0.07
SMARCE1-203ENST00000377808 CCDC57Q2TAC2 916 aa14.6□□□□□ -0.07
SMARCE1-203ENST00000377808 EPHA10Q5JZY3 1008 aa14.6□□□□□ -0.07
SMARCE1-203ENST00000377808 FBXW7Q969H0 707 aa14.6□□□□□ -0.07
SMARCE1-203ENST00000377808 SUCLG2Q96I99 432 aa14.6□□□□□ -0.07
SMARCE1-203ENST00000377808 KCNQ5Q9NR82 932 aa14.6□□□□□ -0.07
SMARCE1-203ENST00000377808 ADARB2Q9NS39 739 aaKnown RBP14.6□□□□□ -0.07
SMARCE1-203ENST00000377808 CEP350Q5VT06 3117 aa14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 NBPF7P0C2Y1 421 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 USP50Q70EL3 339 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 MICALL2Q8IY33 904 aa14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 CNTROBQ8N137 903 aa14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 ANKRD2Q9GZV1 360 aa14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 CNOT7Q9UIV1 285 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 NOB1Q9ULX3 412 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-203ENST00000377808 SHTN1A0MZ66 631 aa14.58□□□□□ -0.08
SMARCE1-203ENST00000377808 WTIPA6NIX2 430 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-203ENST00000377808 H7C1D1 291 aa14.58□□□□□ -0.08
SMARCE1-203ENST00000377808 CHRNDQ07001 517 aa14.58□□□□□ -0.08
SMARCE1-203ENST00000377808 ZNF594Q96JF6 807 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-203ENST00000377808 CNNM1Q9NRU3 951 aa14.58□□□□□ -0.08
SMARCE1-203ENST00000377808 MED23Q9ULK4 1368 aa14.57□□□□□ -0.08
SMARCE1-203ENST00000377808 PLIN1O60240 522 aa14.57□□□□□ -0.08
SMARCE1-203ENST00000377808 HELBQ8NG08 1087 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-203ENST00000377808 LEMD3Q9Y2U8 911 aa14.57□□□□□ -0.08
SMARCE1-203ENST00000377808 ZNF804BA4D1E1 1349 aa14.57□□□□□ -0.08
SMARCE1-203ENST00000377808 ADAMTSL1Q8N6G6 1762 aa14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 TAF5LO75529 589 aa14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 RARSP54136 660 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 RBM26Q5T8P6 1007 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 LDHAL6AQ6ZMR3 332 aa14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 TRPM4Q8TD43 1214 aa14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 KLRG1Q96E93 195 aa14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 API5Q9BZZ5 524 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 BICC1Q9H694 974 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-203ENST00000377808 RPS12P25398 132 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-203ENST00000377808 KLRK1P26718 216 aa14.55□□□□□ -0.08
SMARCE1-203ENST00000377808 TBC1D10BQ4KMP7 808 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-203ENST00000377808 SAMD7Q7Z3H4 446 aa14.55□□□□□ -0.08
SMARCE1-203ENST00000377808 CREBZFQ9NS37 354 aa14.55□□□□□ -0.08
SMARCE1-203ENST00000377808 KIF16BQ96L93 1317 aa14.55□□□□□ -0.08
SMARCE1-203ENST00000377808 PASKQ96RG2 1323 aa14.55□□□□□ -0.08
SMARCE1-203ENST00000377808 USP17L3A6NCW0 530 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 USP17L4A6NCW7 530 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 SNAP23O00161 211 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 RSBN1LQ6PCB5 846 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 USP17L1Q7RTZ2 530 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 PODNQ7Z5L7 613 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 DNAJC5GQ8N7S2 189 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 DPF2Q92785 391 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 FRAT1Q92837 279 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 MKRN1Q9UHC7 482 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 UTYO14607 1347 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 SCN9AQ15858 1988 aa14.54□□□□□ -0.08
SMARCE1-203ENST00000377808 TMEM88BA6NKF7 163 aa14.53□□□□□ -0.08
SMARCE1-203ENST00000377808 VIL1P09327 827 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-203ENST00000377808 TXNRD3Q86VQ6 643 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms