RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 ANP32AP39687 249 aaKnown RBP26■■□□□ 1.75
HLA-C-201ENST00000376228 EPHA10Q5JZY3 1008 aa26■■□□□ 1.75
HLA-C-201ENST00000376228 C7orf43Q8WVR3 580 aa26■■□□□ 1.75
HLA-C-201ENST00000376228 DICER1Q9UPY3 1922 aaKnown RBP26■■□□□ 1.75
HLA-C-201ENST00000376228 AOX1Q06278 1338 aa25.99■■□□□ 1.75
HLA-C-201ENST00000376228 SLC51AQ86UW1 340 aa25.99■■□□□ 1.75
HLA-C-201ENST00000376228 RBM17Q96I25 401 aaKnown RBP25.99■■□□□ 1.75
HLA-C-201ENST00000376228 HOXA10P31260 410 aaPredicted RBP25.98■■□□□ 1.75
HLA-C-201ENST00000376228 PDE1AP54750 535 aa25.98■■□□□ 1.75
HLA-C-201ENST00000376228 OTUD7AQ8TE49 926 aaPredicted RBP25.98■■□□□ 1.75
HLA-C-201ENST00000376228 LMNB1P20700 586 aa25.98■■□□□ 1.75
HLA-C-201ENST00000376228 COPRSQ9NQ92 184 aa25.98■■□□□ 1.75
HLA-C-201ENST00000376228 PCCAP05165 728 aaPredicted RBP25.97■■□□□ 1.75
HLA-C-201ENST00000376228 GSPT1P15170 499 aaKnown RBP25.97■■□□□ 1.75
HLA-C-201ENST00000376228 CCDC93Q567U6 631 aa25.97■■□□□ 1.75
HLA-C-201ENST00000376228 JARID2Q92833 1246 aaPredicted RBP25.97■■□□□ 1.75
HLA-C-201ENST00000376228 TAOK3Q9H2K8 898 aa25.97■■□□□ 1.75
HLA-C-201ENST00000376228 GPBP1L1Q9HC44 474 aaPredicted RBP25.97■■□□□ 1.75
HLA-C-201ENST00000376228 FOXO4P98177 505 aa25.96■■□□□ 1.75
HLA-C-201ENST00000376228 SOGA3Q5TF21 947 aa25.96■■□□□ 1.75
HLA-C-201ENST00000376228 PLA2G12BQ9BX93 195 aa25.96■■□□□ 1.75
HLA-C-201ENST00000376228 EIF5BO60841 1220 aaKnown RBP25.95■■□□□ 1.74
HLA-C-201ENST00000376228 SEC24BO95487 1268 aa25.95■■□□□ 1.74
HLA-C-201ENST00000376228 RFX5P48382 616 aaPredicted RBP25.95■■□□□ 1.74
HLA-C-201ENST00000376228 CRAMP1Q96RY5 1269 aa25.95■■□□□ 1.74
HLA-C-201ENST00000376228 MX1P20591 662 aa25.94■■□□□ 1.74
HLA-C-201ENST00000376228 ZBTB38Q8NAP3 1195 aaPredicted RBP25.94■■□□□ 1.74
HLA-C-201ENST00000376228 CDHR2Q9BYE9 1310 aa25.94■■□□□ 1.74
HLA-C-201ENST00000376228 IRS4O14654 1257 aaPredicted RBP25.93■■□□□ 1.74
HLA-C-201ENST00000376228 PPEF1O14829 653 aaPredicted RBP25.93■■□□□ 1.74
HLA-C-201ENST00000376228 G3BP1Q13283 466 aaKnown RBP eCLIP25.93■■□□□ 1.74
HLA-C-201ENST00000376228 COL4A1P02462 1669 aa25.93■■□□□ 1.74
HLA-C-201ENST00000376228 UPF2Q9HAU5 1272 aaKnown RBP25.93■■□□□ 1.74
HLA-C-201ENST00000376228 PA2G4Q9UQ80 394 aaKnown RBP25.93■■□□□ 1.74
HLA-C-201ENST00000376228 LTBP3Q9NS15 1303 aa25.92■■□□□ 1.74
HLA-C-201ENST00000376228 OS9Q13438 667 aaPredicted RBP25.92■■□□□ 1.74
HLA-C-201ENST00000376228 MYH3P11055 1940 aa25.91■■□□□ 1.74
HLA-C-201ENST00000376228 CDC45O75419 566 aa25.91■■□□□ 1.74
HLA-C-201ENST00000376228 PTPN12Q05209 780 aaKnown RBP25.91■■□□□ 1.74
HLA-C-201ENST00000376228 IL1RAPL2Q9NP60 686 aa25.91■■□□□ 1.74
HLA-C-201ENST00000376228 SNED1Q8TER0 1413 aa25.91■■□□□ 1.74
HLA-C-201ENST00000376228 LMBR1LQ6UX01 489 aa25.9■■□□□ 1.74
HLA-C-201ENST00000376228 DDX46Q7L014 1031 aaKnown RBP25.9■■□□□ 1.74
HLA-C-201ENST00000376228 CLASRPQ8N2M8 674 aaKnown RBP25.9■■□□□ 1.74
HLA-C-201ENST00000376228 SASH1O94885 1247 aa25.89■■□□□ 1.74
HLA-C-201ENST00000376228 FKBP4Q02790 459 aaKnown RBP eCLIP25.89■■□□□ 1.74
HLA-C-201ENST00000376228 RTKN2Q8IZC4 609 aa25.89■■□□□ 1.74
HLA-C-201ENST00000376228 ZNF277Q9NRM2 450 aaPredicted RBP25.89■■□□□ 1.74
HLA-C-201ENST00000376228 SDSP20132 328 aa25.88■■□□□ 1.73
HLA-C-201ENST00000376228 IPO9Q96P70 1041 aaKnown RBP25.88■■□□□ 1.73
HLA-C-201ENST00000376228 TTC41PQ6P2S7 1318 aa25.88■■□□□ 1.73
HLA-C-201ENST00000376228 TBC1D9Q6ZT07 1266 aa25.88■■□□□ 1.73
HLA-C-201ENST00000376228 GRAPQ13588 217 aa25.87■■□□□ 1.73
HLA-C-201ENST00000376228 SF3B3Q15393 1217 aaKnown RBP25.87■■□□□ 1.73
HLA-C-201ENST00000376228 GRAPLQ8TC17 118 aaPredicted RBP25.87■■□□□ 1.73
HLA-C-201ENST00000376228 TBC1D32Q96NH3 1257 aa25.87■■□□□ 1.73
HLA-C-201ENST00000376228 NMRK2Q9NPI5 230 aa25.87■■□□□ 1.73
HLA-C-201ENST00000376228 CSF1RP07333 972 aa25.86■■□□□ 1.73
HLA-C-201ENST00000376228 CCDC85AQ96PX6 553 aaPredicted RBP25.86■■□□□ 1.73
HLA-C-201ENST00000376228 FBXO3Q9UK99 471 aa25.86■■□□□ 1.73
HLA-C-201ENST00000376228 CELF1Q92879 486 aaKnown RBP25.85■■□□□ 1.73
HLA-C-201ENST00000376228 DDRGK1Q96HY6 314 aa25.85■■□□□ 1.73
HLA-C-201ENST00000376228 ATP6V0A2Q9Y487 856 aa25.85■■□□□ 1.73
HLA-C-201ENST00000376228 LRRC37AA6NMS7 1700 aa25.85■■□□□ 1.73
HLA-C-201ENST00000376228 ZC3H4Q9UPT8 1303 aaKnown RBP25.85■■□□□ 1.73
HLA-C-201ENST00000376228 AK9Q5TCS8 1911 aa25.84■■□□□ 1.73
HLA-C-201ENST00000376228 SPEF2Q9C093 1822 aa25.84■■□□□ 1.73
HLA-C-201ENST00000376228 PDE8AO60658 829 aa25.83■■□□□ 1.73
HLA-C-201ENST00000376228 BBOX1O75936 387 aa25.83■■□□□ 1.73
HLA-C-201ENST00000376228 CC2D2BQ6DHV5 1058 aa25.83■■□□□ 1.73
HLA-C-201ENST00000376228 PI4K2BQ8TCG2 481 aa25.83■■□□□ 1.72
HLA-C-201ENST00000376228 PSMD1Q99460 953 aa25.83■■□□□ 1.72
HLA-C-201ENST00000376228 SEC31BQ9NQW1 1179 aa25.83■■□□□ 1.72
HLA-C-201ENST00000376228 COL4A5P29400 1685 aa25.82■■□□□ 1.72
HLA-C-201ENST00000376228 KIF3CO14782 793 aa25.82■■□□□ 1.72
HLA-C-201ENST00000376228 CIAO1O76071 339 aa25.82■■□□□ 1.72
HLA-C-201ENST00000376228 IARSP41252 1262 aaKnown RBP25.82■■□□□ 1.72
HLA-C-201ENST00000376228 KLHDC4Q8TBB5 520 aa25.82■■□□□ 1.72
HLA-C-201ENST00000376228 BCL11AQ9H165 835 aa25.82■■□□□ 1.72
HLA-C-201ENST00000376228 TMX4Q9H1E5 349 aaPredicted RBP25.82■■□□□ 1.72
HLA-C-201ENST00000376228 HSP90B1P14625 803 aaKnown RBP25.81■■□□□ 1.72
HLA-C-201ENST00000376228 CASC1Q6TDU7 716 aa25.81■■□□□ 1.72
HLA-C-201ENST00000376228 GPATCH3Q96I76 525 aa25.81■■□□□ 1.72
HLA-C-201ENST00000376228 GLTPD2A6NH11 291 aa25.8■■□□□ 1.72
HLA-C-201ENST00000376228 ERC2O15083 957 aa25.8■■□□□ 1.72
HLA-C-201ENST00000376228 GLRX3O76003 335 aaKnown RBP25.8■■□□□ 1.72
HLA-C-201ENST00000376228 IFIT2P09913 472 aaKnown RBP25.8■■□□□ 1.72
HLA-C-201ENST00000376228 SP8Q8IXZ3 490 aa25.8■■□□□ 1.72
HLA-C-201ENST00000376228 SIL1Q9H173 461 aa25.8■■□□□ 1.72
HLA-C-201ENST00000376228 RRAGCQ9HB90 399 aa25.8■■□□□ 1.72
HLA-C-201ENST00000376228 GPR108Q9NPR9 543 aa25.8■■□□□ 1.72
HLA-C-201ENST00000376228 MFAP1P55081 439 aaKnown RBP25.79■■□□□ 1.72
HLA-C-201ENST00000376228 CCDC152Q4G0S7 254 aa25.79■■□□□ 1.72
HLA-C-201ENST00000376228 EAF2Q96CJ1 260 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-201ENST00000376228 ECHDC1Q9NTX5 307 aa25.79■■□□□ 1.72
HLA-C-201ENST00000376228 IL15P40933 162 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-201ENST00000376228 CTSWP56202 376 aa25.78■■□□□ 1.72
HLA-C-201ENST00000376228 C1QTNF8P60827 252 aa25.78■■□□□ 1.72
HLA-C-201ENST00000376228 AACSQ86V21 672 aa25.78■■□□□ 1.72
HLA-C-201ENST00000376228 C22orf23Q9BZE7 217 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms