RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
LSM2-208ENST00000375661 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
LSM2-208ENST00000375661 DBF4Q9UBU7 674 aaPredicted RBP15.72■□□□□ 0.11
LSM2-208ENST00000375661 C6orf229H3BNL8 230 aa15.71■□□□□ 0.11
LSM2-208ENST00000375661 ECE2O60344 883 aa15.71■□□□□ 0.11
LSM2-208ENST00000375661 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.11
LSM2-208ENST00000375661 TBC1D10BQ4KMP7 808 aaPredicted RBP15.71■□□□□ 0.11
LSM2-208ENST00000375661 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
LSM2-208ENST00000375661 HDGFL1Q5TGJ6 251 aa15.71■□□□□ 0.11
LSM2-208ENST00000375661 FAM89AQ96GI7 184 aa15.71■□□□□ 0.11
LSM2-208ENST00000375661 POLLQ9UGP5 575 aa15.71■□□□□ 0.11
LSM2-208ENST00000375661 RIMBP2O15034 1052 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 GPSM2P81274 684 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
LSM2-208ENST00000375661 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 CFAP44Q96MT7 982 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 ZIC5Q96T25 663 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 HYPKQ9NX55 129 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 RTL9Q8NET4 1388 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 COL4A1P02462 1669 aa15.7■□□□□ 0.1
LSM2-208ENST00000375661 VIL1P09327 827 aaKnown RBP15.69■□□□□ 0.1
LSM2-208ENST00000375661 RPS8P62241 208 aaKnown RBP15.69■□□□□ 0.1
LSM2-208ENST00000375661 CCDC27Q2M243 656 aa15.69■□□□□ 0.1
LSM2-208ENST00000375661 KRT24Q2M2I5 525 aa15.69■□□□□ 0.1
LSM2-208ENST00000375661 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
LSM2-208ENST00000375661 SULF1Q8IWU6 871 aa15.69■□□□□ 0.1
LSM2-208ENST00000375661 ZC3H12CQ9C0D7 883 aaKnown RBP15.69■□□□□ 0.1
LSM2-208ENST00000375661 ADM5C9JUS6 153 aa15.68■□□□□ 0.1
LSM2-208ENST00000375661 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
LSM2-208ENST00000375661 EGFRP00533 1210 aa15.68■□□□□ 0.1
LSM2-208ENST00000375661 ZNF157P51786 506 aaPredicted RBP15.68■□□□□ 0.1
LSM2-208ENST00000375661 KIF23Q02241 960 aaPredicted RBP15.68■□□□□ 0.1
LSM2-208ENST00000375661 PCDH10Q9P2E7 1040 aa15.68■□□□□ 0.1
LSM2-208ENST00000375661 SALL2Q9Y467 1007 aaPredicted RBP15.68■□□□□ 0.1
LSM2-208ENST00000375661 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
LSM2-208ENST00000375661 SLC10A3P09131 477 aa15.67■□□□□ 0.1
LSM2-208ENST00000375661 DOK7Q18PE1 504 aa15.67■□□□□ 0.1
LSM2-208ENST00000375661 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
LSM2-208ENST00000375661 WWC1Q8IX03 1113 aa15.67■□□□□ 0.1
LSM2-208ENST00000375661 ZBTB38Q8NAP3 1195 aaPredicted RBP15.67■□□□□ 0.1
LSM2-208ENST00000375661 LAS1LQ9Y4W2 734 aaKnown RBP15.67■□□□□ 0.1
LSM2-208ENST00000375661 PAPPA2Q9BXP8 1791 aa15.67■□□□□ 0.1
LSM2-208ENST00000375661 G3V3G9 751 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 FKBP1BP68106 108 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 DLK2Q6UY11 383 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 AGBL3Q8NEM8 1001 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 KCNQ5Q9NR82 932 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 GGA3Q9NZ52 723 aa15.66■□□□□ 0.1
LSM2-208ENST00000375661 MYH3P11055 1940 aa15.65■□□□□ 0.1
LSM2-208ENST00000375661 ZNF280AP59817 542 aaPredicted RBP15.65■□□□□ 0.1
LSM2-208ENST00000375661 GGA1Q9UJY5 639 aa15.65■□□□□ 0.1
LSM2-208ENST00000375661 PITPNM2Q9BZ72 1349 aa15.65■□□□□ 0.1
LSM2-208ENST00000375661 TRPA1O75762 1119 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 UFL1O94874 794 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 ZNF853P0CG23 659 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 GOLGA2Q08379 1002 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 CCDC152Q4G0S7 254 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 DUSP27Q5VZP5 1158 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 RSBN1LQ6PCB5 846 aaPredicted RBP15.64■□□□□ 0.09
LSM2-208ENST00000375661 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 CDCA5Q96FF9 252 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 ANKIB1Q9P2G1 1089 aa15.64■□□□□ 0.09
LSM2-208ENST00000375661 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
LSM2-208ENST00000375661 CCDC191Q8NCU4 936 aa15.63■□□□□ 0.09
LSM2-208ENST00000375661 CSRNP1Q96S65 589 aa15.63■□□□□ 0.09
LSM2-208ENST00000375661 ZNF521Q96K83 1311 aa15.63■□□□□ 0.09
LSM2-208ENST00000375661 PDE8AO60658 829 aa15.62■□□□□ 0.09
LSM2-208ENST00000375661 PCCAP05165 728 aaPredicted RBP15.62■□□□□ 0.09
LSM2-208ENST00000375661 CTU1Q7Z7A3 348 aaKnown RBP15.62■□□□□ 0.09
LSM2-208ENST00000375661 RASAL3Q86YV0 1011 aa15.62■□□□□ 0.09
LSM2-208ENST00000375661 WDR63Q8IWG1 891 aa15.62■□□□□ 0.09
LSM2-208ENST00000375661 SEC31BQ9NQW1 1179 aa15.62■□□□□ 0.09
LSM2-208ENST00000375661 XDHP47989 1333 aa15.62■□□□□ 0.09
LSM2-208ENST00000375661 ZNF646O15015 1829 aaPredicted RBP15.61■□□□□ 0.09
LSM2-208ENST00000375661 PDE4DIPQ5VU43 2346 aa15.61■□□□□ 0.09
LSM2-208ENST00000375661 CALD1Q05682 793 aaKnown RBP15.61■□□□□ 0.09
LSM2-208ENST00000375661 SCARF1Q14162 830 aa15.61■□□□□ 0.09
LSM2-208ENST00000375661 ANGEL2Q5VTE6 544 aaKnown RBP15.61■□□□□ 0.09
LSM2-208ENST00000375661 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
LSM2-208ENST00000375661 CHMP4AQ9BY43 222 aa15.61■□□□□ 0.09
LSM2-208ENST00000375661 IFT57Q9NWB7 429 aa15.61■□□□□ 0.09
LSM2-208ENST00000375661 SPEF2Q9C093 1822 aa15.61■□□□□ 0.09
LSM2-208ENST00000375661 TNRC18O15417 2968 aaPredicted RBP15.6■□□□□ 0.09
LSM2-208ENST00000375661 USP17L8P0C7I0 530 aa15.6■□□□□ 0.09
LSM2-208ENST00000375661 ATP2B4P23634 1241 aa15.6■□□□□ 0.09
LSM2-208ENST00000375661 PKN2Q16513 984 aaKnown RBP15.6■□□□□ 0.09
LSM2-208ENST00000375661 ANKRD18AQ8IVF6 992 aa15.6■□□□□ 0.09
LSM2-208ENST00000375661 GMLQ99445 158 aa15.6■□□□□ 0.09
LSM2-208ENST00000375661 MYOZ2Q9NPC6 264 aa15.6■□□□□ 0.09
LSM2-208ENST00000375661 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
LSM2-208ENST00000375661 MBIPQ9NS73 344 aa15.6■□□□□ 0.09
LSM2-208ENST00000375661 ASTN2O75129 1339 aaPredicted RBP15.6■□□□□ 0.09
LSM2-208ENST00000375661 IL16Q14005 1332 aa15.6■□□□□ 0.09
LSM2-208ENST00000375661 USP17L3A6NCW0 530 aa15.59■□□□□ 0.09
LSM2-208ENST00000375661 USP17L4A6NCW7 530 aa15.59■□□□□ 0.09
LSM2-208ENST00000375661 MMP14P50281 582 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms