RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 ZKSCAN2Q63HK3 967 aa20.13■□□□□ 0.81
C11orf88-202ENST00000375618 SUPT20HQ8NEM7 779 aa20.13■□□□□ 0.81
C11orf88-202ENST00000375618 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
C11orf88-202ENST00000375618 RLBP1P12271 317 aa20.12■□□□□ 0.81
C11orf88-202ENST00000375618 IFIT5Q13325 482 aaKnown RBP20.12■□□□□ 0.81
C11orf88-202ENST00000375618 RRAGCQ9HB90 399 aa20.12■□□□□ 0.81
C11orf88-202ENST00000375618 KDM2BQ8NHM5 1336 aa20.11■□□□□ 0.81
C11orf88-202ENST00000375618 C6orf229H3BNL8 230 aa20.11■□□□□ 0.81
C11orf88-202ENST00000375618 UFL1O94874 794 aa20.11■□□□□ 0.81
C11orf88-202ENST00000375618 IGHMBP2P38935 993 aaKnown RBP20.11■□□□□ 0.81
C11orf88-202ENST00000375618 TMEM57Q8N5G2 664 aa20.11■□□□□ 0.81
C11orf88-202ENST00000375618 ANKIB1Q9P2G1 1089 aa20.11■□□□□ 0.81
C11orf88-202ENST00000375618 RIMBP2O15034 1052 aa20.1■□□□□ 0.81
C11orf88-202ENST00000375618 NIM1KQ8IY84 436 aa20.1■□□□□ 0.81
C11orf88-202ENST00000375618 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
C11orf88-202ENST00000375618 VPS33BQ9H267 617 aa20.1■□□□□ 0.81
C11orf88-202ENST00000375618 A0A1B0GUL6 1792 aa20.1■□□□□ 0.81
C11orf88-202ENST00000375618 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
C11orf88-202ENST00000375618 XDHP47989 1333 aa20.09■□□□□ 0.81
C11orf88-202ENST00000375618 YDJCA8MPS7 323 aa20.09■□□□□ 0.81
C11orf88-202ENST00000375618 UBTFL1P0CB47 393 aaPredicted RBP20.09■□□□□ 0.81
C11orf88-202ENST00000375618 WASHC4Q2M389 1173 aa20.09■□□□□ 0.81
C11orf88-202ENST00000375618 CCDC57Q2TAC2 916 aa20.09■□□□□ 0.81
C11orf88-202ENST00000375618 PUS3Q9BZE2 481 aaKnown RBP20.09■□□□□ 0.81
C11orf88-202ENST00000375618 GGA1Q9UJY5 639 aa20.09■□□□□ 0.81
C11orf88-202ENST00000375618 RCAN3Q9UKA8 241 aa20.09■□□□□ 0.81
C11orf88-202ENST00000375618 SNAP23O00161 211 aa20.08■□□□□ 0.81
C11orf88-202ENST00000375618 KLRK1P26718 216 aa20.08■□□□□ 0.81
C11orf88-202ENST00000375618 CHRNDQ07001 517 aa20.08■□□□□ 0.81
C11orf88-202ENST00000375618 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.81
C11orf88-202ENST00000375618 MPHOSPH8Q99549 860 aa20.08■□□□□ 0.81
C11orf88-202ENST00000375618 LRRFIP2Q9Y608 721 aaKnown RBP20.08■□□□□ 0.81
C11orf88-202ENST00000375618 RFX5P48382 616 aaPredicted RBP20.07■□□□□ 0.8
C11orf88-202ENST00000375618 DOK7Q18PE1 504 aa20.07■□□□□ 0.8
C11orf88-202ENST00000375618 HELBQ8NG08 1087 aaPredicted RBP20.07■□□□□ 0.8
C11orf88-202ENST00000375618 KLHDC4Q8TBB5 520 aa20.07■□□□□ 0.8
C11orf88-202ENST00000375618 DBNDD1Q9H9R9 158 aa20.07■□□□□ 0.8
C11orf88-202ENST00000375618 KCNQ5Q9NR82 932 aa20.07■□□□□ 0.8
C11orf88-202ENST00000375618 ZNRF3Q9ULT6 936 aa20.07■□□□□ 0.8
C11orf88-202ENST00000375618 ATP2B4P23634 1241 aa20.06■□□□□ 0.8
C11orf88-202ENST00000375618 CXCL9Q07325 125 aa20.06■□□□□ 0.8
C11orf88-202ENST00000375618 TXNRD3Q86VQ6 643 aa20.06■□□□□ 0.8
C11orf88-202ENST00000375618 DZIP1LQ8IYY4 767 aaKnown RBP20.06■□□□□ 0.8
C11orf88-202ENST00000375618 PLIN1O60240 522 aa20.05■□□□□ 0.8
C11orf88-202ENST00000375618 TAF5LO75529 589 aa20.05■□□□□ 0.8
C11orf88-202ENST00000375618 PANK1Q8TE04 598 aa20.05■□□□□ 0.8
C11orf88-202ENST00000375618 L3MBTL3Q96JM7 780 aaPredicted RBP20.05■□□□□ 0.8
C11orf88-202ENST00000375618 EYA3Q99504 573 aa20.05■□□□□ 0.8
C11orf88-202ENST00000375618 IRS2Q9Y4H2 1338 aa20.04■□□□□ 0.8
C11orf88-202ENST00000375618 RAD17O75943 681 aa20.04■□□□□ 0.8
C11orf88-202ENST00000375618 EIF6P56537 245 aaKnown RBP20.04■□□□□ 0.8
C11orf88-202ENST00000375618 LRRC24Q50LG9 513 aa20.04■□□□□ 0.8
C11orf88-202ENST00000375618 TAF7LQ5H9L4 462 aa20.04■□□□□ 0.8
C11orf88-202ENST00000375618 LDHAL6AQ6ZMR3 332 aa20.04■□□□□ 0.8
C11orf88-202ENST00000375618 RIPOR2Q9Y4F9 1068 aa20.04■□□□□ 0.8
C11orf88-202ENST00000375618 GJA3Q9Y6H8 435 aa20.04■□□□□ 0.8
C11orf88-202ENST00000375618 SCN9AQ15858 1988 aa20.03■□□□□ 0.8
C11orf88-202ENST00000375618 ECE2O60344 883 aa20.03■□□□□ 0.8
C11orf88-202ENST00000375618 GPC2Q8N158 579 aa20.03■□□□□ 0.8
C11orf88-202ENST00000375618 ZC3H12CQ9C0D7 883 aaKnown RBP20.03■□□□□ 0.8
C11orf88-202ENST00000375618 ANKRD2Q9GZV1 360 aa20.03■□□□□ 0.8
C11orf88-202ENST00000375618 ZNF804BA4D1E1 1349 aa20.02■□□□□ 0.8
C11orf88-202ENST00000375618 VEGFAP15692 232 aaPredicted RBP20.02■□□□□ 0.8
C11orf88-202ENST00000375618 SCNN1DP51172 638 aa20.02■□□□□ 0.8
C11orf88-202ENST00000375618 CNNM1Q9NRU3 951 aa20.02■□□□□ 0.8
C11orf88-202ENST00000375618 LEMD3Q9Y2U8 911 aa20.02■□□□□ 0.8
C11orf88-202ENST00000375618 MED23Q9ULK4 1368 aa20.02■□□□□ 0.8
C11orf88-202ENST00000375618 GNAI3P08754 354 aa20.01■□□□□ 0.79
C11orf88-202ENST00000375618 PTPN12Q05209 780 aaKnown RBP20.01■□□□□ 0.79
C11orf88-202ENST00000375618 FTSJ3Q8IY81 847 aaKnown RBP20.01■□□□□ 0.79
C11orf88-202ENST00000375618 POTEIP0CG38 1075 aa20■□□□□ 0.79
C11orf88-202ENST00000375618 POTEJP0CG39 1038 aa20■□□□□ 0.79
C11orf88-202ENST00000375618 C1QTNF8P60827 252 aa20■□□□□ 0.79
C11orf88-202ENST00000375618 C20orf194Q5TEA3 1177 aa20■□□□□ 0.79
C11orf88-202ENST00000375618 CIAPIN1Q6FI81 312 aa20■□□□□ 0.79
C11orf88-202ENST00000375618 ITPRIPQ8IWB1 547 aa20■□□□□ 0.79
C11orf88-202ENST00000375618 SHTN1A0MZ66 631 aa19.99■□□□□ 0.79
C11orf88-202ENST00000375618 PSMD14O00487 310 aa19.99■□□□□ 0.79
C11orf88-202ENST00000375618 ZBTB7BO15156 539 aaPredicted RBP19.99■□□□□ 0.79
C11orf88-202ENST00000375618 VGLL2Q8N8G2 317 aa19.99■□□□□ 0.79
C11orf88-202ENST00000375618 TAF1DQ9H5J8 278 aaPredicted RBP19.99■□□□□ 0.79
C11orf88-202ENST00000375618 PA2G4Q9UQ80 394 aaKnown RBP19.99■□□□□ 0.79
C11orf88-202ENST00000375618 ZBTB12Q9Y330 459 aaPredicted RBP19.99■□□□□ 0.79
C11orf88-202ENST00000375618 ZNF646O15015 1829 aaPredicted RBP19.98■□□□□ 0.79
C11orf88-202ENST00000375618 SCN4AP35499 1836 aa19.98■□□□□ 0.79
C11orf88-202ENST00000375618 TOMM70O94826 608 aa19.98■□□□□ 0.79
C11orf88-202ENST00000375618 EPS15P42566 896 aa19.98■□□□□ 0.79
C11orf88-202ENST00000375618 GMPSP49915 693 aaPredicted RBP19.98■□□□□ 0.79
C11orf88-202ENST00000375618 MTX1Q13505 466 aa19.98■□□□□ 0.79
C11orf88-202ENST00000375618 ATG9AQ7Z3C6 839 aa19.98■□□□□ 0.79
C11orf88-202ENST00000375618 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
C11orf88-202ENST00000375618 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
C11orf88-202ENST00000375618 GNAI2P04899 355 aa19.97■□□□□ 0.79
C11orf88-202ENST00000375618 HACL1Q9UJ83 578 aa19.97■□□□□ 0.79
C11orf88-202ENST00000375618 EYA2O00167 538 aa19.96■□□□□ 0.79
C11orf88-202ENST00000375618 KCNJ4P48050 445 aa19.96■□□□□ 0.79
C11orf88-202ENST00000375618 C15orf52Q6ZUT6 534 aaKnown RBP19.96■□□□□ 0.79
C11orf88-202ENST00000375618 SIL1Q9H173 461 aa19.96■□□□□ 0.79
C11orf88-202ENST00000375618 MROH5Q6ZUA9 1318 aa19.96■□□□□ 0.79
C11orf88-202ENST00000375618 ADAMTSL1Q8N6G6 1762 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms