RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 VPS33BQ9H267 617 aa18.37■□□□□ 0.53
UBXN11-207ENST00000374223 ABT1Q9ULW3 272 aaKnown RBP18.37■□□□□ 0.53
UBXN11-207ENST00000374223 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
UBXN11-207ENST00000374223 PSMD14O00487 310 aa18.36■□□□□ 0.53
UBXN11-207ENST00000374223 PDE8AO60658 829 aa18.36■□□□□ 0.53
UBXN11-207ENST00000374223 VAMP4O75379 141 aa18.36■□□□□ 0.53
UBXN11-207ENST00000374223 WASHC4Q2M389 1173 aa18.36■□□□□ 0.53
UBXN11-207ENST00000374223 CST9Q5W186 159 aa18.36■□□□□ 0.53
UBXN11-207ENST00000374223 USP50Q70EL3 339 aaPredicted RBP18.36■□□□□ 0.53
UBXN11-207ENST00000374223 PSME4Q14997 1843 aa18.35■□□□□ 0.53
UBXN11-207ENST00000374223 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
UBXN11-207ENST00000374223 LBX1P52954 281 aa18.35■□□□□ 0.53
UBXN11-207ENST00000374223 THSD7BQ9C0I4 1608 aa18.35■□□□□ 0.53
UBXN11-207ENST00000374223 IL16Q14005 1332 aa18.34■□□□□ 0.53
UBXN11-207ENST00000374223 GLIS2Q9BZE0 524 aaPredicted RBP18.34■□□□□ 0.53
UBXN11-207ENST00000374223 ADARB2Q9NS39 739 aaKnown RBP18.34■□□□□ 0.53
UBXN11-207ENST00000374223 CNOT7Q9UIV1 285 aaKnown RBP18.34■□□□□ 0.53
UBXN11-207ENST00000374223 ECE2O60344 883 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 DDX58O95786 925 aaKnown RBP18.33■□□□□ 0.53
UBXN11-207ENST00000374223 HSPA8P11142 646 aaKnown RBP18.33■□□□□ 0.53
UBXN11-207ENST00000374223 ECE1P42892 770 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 SAMD7Q7Z3H4 446 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 TMC4Q7Z404 712 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 TTLL11Q8NHH1 800 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 STK31Q9BXU1 1019 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 GREM2Q9H772 168 aa18.33■□□□□ 0.53
UBXN11-207ENST00000374223 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 F6X3S4 739 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 H7C1W4 665 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 UFL1O94874 794 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 CASP7P55210 303 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 CTSWP56202 376 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 FLIIQ13045 1269 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 UBE3BQ7Z3V4 1068 aa18.32■□□□□ 0.52
UBXN11-207ENST00000374223 CCDC152Q4G0S7 254 aa18.31■□□□□ 0.52
UBXN11-207ENST00000374223 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
UBXN11-207ENST00000374223 MICALL2Q8IY33 904 aa18.31■□□□□ 0.52
UBXN11-207ENST00000374223 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
UBXN11-207ENST00000374223 A0A1B0GUL6 1792 aa18.31■□□□□ 0.52
UBXN11-207ENST00000374223 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
UBXN11-207ENST00000374223 TNIP1Q15025 636 aa18.3■□□□□ 0.52
UBXN11-207ENST00000374223 TBC1D10BQ4KMP7 808 aaPredicted RBP18.3■□□□□ 0.52
UBXN11-207ENST00000374223 CAPNS2Q96L46 248 aa18.3■□□□□ 0.52
UBXN11-207ENST00000374223 GCKRQ14397 625 aa18.29■□□□□ 0.52
UBXN11-207ENST00000374223 RBM26Q5T8P6 1007 aaKnown RBP18.29■□□□□ 0.52
UBXN11-207ENST00000374223 BEGAINQ9BUH8 593 aa18.29■□□□□ 0.52
UBXN11-207ENST00000374223 ANKIB1Q9P2G1 1089 aa18.29■□□□□ 0.52
UBXN11-207ENST00000374223 PGAP2Q9UHJ9 254 aa18.29■□□□□ 0.52
UBXN11-207ENST00000374223 TLL2Q9Y6L7 1015 aa18.29■□□□□ 0.52
UBXN11-207ENST00000374223 FKBP5Q13451 457 aaPredicted RBP18.28■□□□□ 0.52
UBXN11-207ENST00000374223 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
UBXN11-207ENST00000374223 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
UBXN11-207ENST00000374223 TXNRD3Q86VQ6 643 aa18.28■□□□□ 0.52
UBXN11-207ENST00000374223 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
UBXN11-207ENST00000374223 MXD3Q9BW11 206 aa18.28■□□□□ 0.52
UBXN11-207ENST00000374223 GGA1Q9UJY5 639 aa18.28■□□□□ 0.52
UBXN11-207ENST00000374223 KLRK1P26718 216 aa18.27■□□□□ 0.52
UBXN11-207ENST00000374223 CYP4F22Q6NT55 531 aa18.27■□□□□ 0.52
UBXN11-207ENST00000374223 DNAAF4Q8WXU2 420 aa18.27■□□□□ 0.52
UBXN11-207ENST00000374223 MINPP1Q9UNW1 487 aa18.27■□□□□ 0.52
UBXN11-207ENST00000374223 SNAP23O00161 211 aa18.26■□□□□ 0.51
UBXN11-207ENST00000374223 NEXNQ0ZGT2 675 aa18.26■□□□□ 0.51
UBXN11-207ENST00000374223 GRM1Q13255 1194 aa18.26■□□□□ 0.51
UBXN11-207ENST00000374223 FAM161AQ3B820 660 aa18.26■□□□□ 0.51
UBXN11-207ENST00000374223 USP48Q86UV5 1035 aa18.26■□□□□ 0.51
UBXN11-207ENST00000374223 ABHD8Q96I13 439 aa18.26■□□□□ 0.51
UBXN11-207ENST00000374223 ZC3H12CQ9C0D7 883 aaKnown RBP18.26■□□□□ 0.51
UBXN11-207ENST00000374223 AOC2O75106 756 aa18.25■□□□□ 0.51
UBXN11-207ENST00000374223 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
UBXN11-207ENST00000374223 VIL1P09327 827 aaKnown RBP18.25■□□□□ 0.51
UBXN11-207ENST00000374223 MAP2K2P36507 400 aa18.25■□□□□ 0.51
UBXN11-207ENST00000374223 EPHA10Q5JZY3 1008 aa18.25■□□□□ 0.51
UBXN11-207ENST00000374223 EYA3Q99504 573 aa18.25■□□□□ 0.51
UBXN11-207ENST00000374223 ZNF408Q9H9D4 720 aa18.25■□□□□ 0.51
UBXN11-207ENST00000374223 SCAF8Q9UPN6 1271 aaKnown RBP18.25■□□□□ 0.51
UBXN11-207ENST00000374223 ZNF521Q96K83 1311 aa18.25■□□□□ 0.51
UBXN11-207ENST00000374223 H7C1D1 291 aa18.24■□□□□ 0.51
UBXN11-207ENST00000374223 ZC3H15Q8WU90 426 aaKnown RBP18.24■□□□□ 0.51
UBXN11-207ENST00000374223 DPF2Q92785 391 aa18.24■□□□□ 0.51
UBXN11-207ENST00000374223 HHIPL1Q96JK4 782 aa18.24■□□□□ 0.51
UBXN11-207ENST00000374223 XDHP47989 1333 aa18.24■□□□□ 0.51
UBXN11-207ENST00000374223 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 FOXO4P98177 505 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 BEND3Q5T5X7 828 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 SAPCD2Q86UD0 394 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 BSDC1Q9NW68 430 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-207ENST00000374223 CSF1RP07333 972 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 ITGA6P23229 1130 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 LINS1Q8NG48 757 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 GMLQ99445 158 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
UBXN11-207ENST00000374223 CA12O43570 354 aa18.22■□□□□ 0.51
UBXN11-207ENST00000374223 ATP2B4P23634 1241 aa18.22■□□□□ 0.51
UBXN11-207ENST00000374223 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
UBXN11-207ENST00000374223 HELBQ8NG08 1087 aaPredicted RBP18.22■□□□□ 0.51
UBXN11-207ENST00000374223 CDC5LQ99459 802 aaKnown RBP18.22■□□□□ 0.51
UBXN11-207ENST00000374223 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
UBXN11-207ENST00000374223 HSP90B1P14625 803 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms