RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CYP46A1Q9Y6A2 500 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 IL13P35225 146 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 LEKR1Q6ZMV7 388 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 CCDC150Q8NCX0 1101 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 EVCP57679 992 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 ATP8B2P98198 1209 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 ADCK5Q3MIX3 580 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 DDX17Q92841 729 aaKnown RBP15.06■□□□□ 0
PRPF4-201ENST00000374198 CARD6Q9BX69 1037 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 TM6SF1Q9BZW5 370 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 F6X3S4 739 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 LRRFIP1Q32MZ4 808 aaKnown RBP15.06■□□□□ 0
PRPF4-201ENST00000374198 ARMCX5Q6P1M9 558 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 FUT8Q9BYC5 575 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 ARFGAP3Q9NP61 516 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 SPG7Q9UQ90 795 aa15.06■□□□□ 0
PRPF4-201ENST00000374198 BRD2P25440 801 aaKnown RBP15.05■□□□□ 0
PRPF4-201ENST00000374198 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ 0
PRPF4-201ENST00000374198 EPC1Q9H2F5 836 aa15.05■□□□□ 0
PRPF4-201ENST00000374198 DEF6Q9H4E7 631 aa15.05■□□□□ 0
PRPF4-201ENST00000374198 TPCN1Q9ULQ1 816 aa15.05■□□□□ 0
PRPF4-201ENST00000374198 CTAGE5O15320 804 aa15.05■□□□□ -0
PRPF4-201ENST00000374198 GPR161Q8N6U8 529 aaKnown RBP15.05■□□□□ -0
PRPF4-201ENST00000374198 GPATCH11Q8N954 259 aa15.05■□□□□ -0
PRPF4-201ENST00000374198 CHL1O00533 1208 aa15.04■□□□□ -0
PRPF4-201ENST00000374198 URI1O94763 535 aaPredicted RBP15.04■□□□□ -0
PRPF4-201ENST00000374198 DLG5Q8TDM6 1919 aa15.04■□□□□ -0
PRPF4-201ENST00000374198 TTC41PQ6P2S7 1318 aa15.04■□□□□ -0
PRPF4-201ENST00000374198 EIF3CLB5ME19 914 aaKnown RBP15.04■□□□□ -0
PRPF4-201ENST00000374198 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
PRPF4-201ENST00000374198 SFPQP23246 707 aaKnown RBP eCLIP15.04■□□□□ -0
PRPF4-201ENST00000374198 CWC27Q6UX04 472 aaKnown RBP15.04■□□□□ -0
PRPF4-201ENST00000374198 NUTM1Q86Y26 1132 aa15.04■□□□□ -0
PRPF4-201ENST00000374198 EIF3CQ99613 913 aaKnown RBP15.04■□□□□ -0
PRPF4-201ENST00000374198 H3BQF6 201 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 CCP110O43303 1012 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 NRDCO43847 1150 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 PRR29P0C7W0 189 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 TRIM65Q6PJ69 517 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 PI4K2BQ8TCG2 481 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 IL1RAPL2Q9NP60 686 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 ANO10Q9NW15 660 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 AHDC1Q5TGY3 1603 aaPredicted RBP15.03■□□□□ -0
PRPF4-201ENST00000374198 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
PRPF4-201ENST00000374198 RPS6KA5O75582 802 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 SART3Q15020 963 aaKnown RBP15.03■□□□□ -0
PRPF4-201ENST00000374198 LARP1Q6PKG0 1096 aaKnown RBP15.03■□□□□ -0
PRPF4-201ENST00000374198 AOPEPQ8N6M6 819 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 PPM1EQ8WY54 764 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 PARP3Q9Y6F1 533 aa15.03■□□□□ -0
PRPF4-201ENST00000374198 G2E3Q7L622 706 aa15.02■□□□□ -0
PRPF4-201ENST00000374198 CNTROBQ8N137 903 aa15.02■□□□□ -0
PRPF4-201ENST00000374198 ADCY9O60503 1353 aa15.02■□□□□ -0
PRPF4-201ENST00000374198 JCADQ9P266 1359 aa15.02■□□□□ -0
PRPF4-201ENST00000374198 FANCGO15287 622 aa15.02□□□□□ -0.01
PRPF4-201ENST00000374198 SMC2O95347 1197 aa15.02□□□□□ -0.01
PRPF4-201ENST00000374198 DHX8Q14562 1220 aaKnown RBP15.02□□□□□ -0.01
PRPF4-201ENST00000374198 CT47A1Q5JQC4 288 aaPredicted RBP15.02□□□□□ -0.01
PRPF4-201ENST00000374198 PRPF40BQ6NWY9 871 aaKnown RBP15.02□□□□□ -0.01
PRPF4-201ENST00000374198 CEP57L1Q8IYX8 460 aa15.02□□□□□ -0.01
PRPF4-201ENST00000374198 KCNB2Q92953 911 aa15.02□□□□□ -0.01
PRPF4-201ENST00000374198 TMC6Q7Z403 805 aa15.02□□□□□ -0.01
PRPF4-201ENST00000374198 SUGP1Q8IWZ8 645 aaKnown RBP15.02□□□□□ -0.01
PRPF4-201ENST00000374198 ZNF622Q969S3 477 aaKnown RBP eCLIP15.02□□□□□ -0.017e-6■■□□□ 12.8
PRPF4-201ENST00000374198 COL16A1Q07092 1604 aaPredicted RBP15.01□□□□□ -0.01
PRPF4-201ENST00000374198 EMILIN1Q9Y6C2 1016 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 FMN2Q9NZ56 1722 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 A0A087WWV3 80 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 CCDC172P0C7W6 258 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 CORO7P57737 925 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 PTH1RQ03431 593 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 FOXR1Q6PIV2 292 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 PARD6BQ9BYG5 372 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 NAT10Q9H0A0 1025 aaKnown RBP15.01□□□□□ -0.01
PRPF4-201ENST00000374198 CEP83Q9Y592 693 aa15.01□□□□□ -0.01
PRPF4-201ENST00000374198 KIF20BQ96Q89 1820 aa15□□□□□ -0.01
PRPF4-201ENST00000374198 FOXO3O43524 673 aa15□□□□□ -0.01
PRPF4-201ENST00000374198 IFIT2P09913 472 aaKnown RBP15□□□□□ -0.01
PRPF4-201ENST00000374198 SWT1Q5T5J6 900 aaKnown RBP15□□□□□ -0.01
PRPF4-201ENST00000374198 CCDC91Q7Z6B0 441 aa15□□□□□ -0.01
PRPF4-201ENST00000374198 DDX54Q8TDD1 881 aaKnown RBP15□□□□□ -0.01
PRPF4-201ENST00000374198 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
PRPF4-201ENST00000374198 MED1Q15648 1581 aaPredicted RBP15□□□□□ -0.01
PRPF4-201ENST00000374198 WASLO00401 505 aaPredicted RBP15□□□□□ -0.01
PRPF4-201ENST00000374198 MAP2K7O14733 419 aa15□□□□□ -0.01
PRPF4-201ENST00000374198 LONRF2Q1L5Z9 754 aa15□□□□□ -0.01
PRPF4-201ENST00000374198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.017e-6■■□□□ 11.5
PRPF4-201ENST00000374198 XPO4Q9C0E2 1151 aaKnown RBP15□□□□□ -0.01
PRPF4-201ENST00000374198 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
PRPF4-201ENST00000374198 GNL2Q13823 731 aaKnown RBP14.99□□□□□ -0.01
PRPF4-201ENST00000374198 RSRC2Q7L4I2 434 aaKnown RBP14.99□□□□□ -0.01
PRPF4-201ENST00000374198 VPS18Q9P253 973 aa14.99□□□□□ -0.01
PRPF4-201ENST00000374198 BANK1Q8NDB2 785 aa14.99□□□□□ -0.01
PRPF4-201ENST00000374198 ZSCAN16Q9H4T2 348 aaPredicted RBP14.99□□□□□ -0.01
PRPF4-201ENST00000374198 MKRN1Q9UHC7 482 aaKnown RBP14.99□□□□□ -0.01
PRPF4-201ENST00000374198 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
PRPF4-201ENST00000374198 RAB11FIP3O75154 756 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 GSCP56915 257 aaPredicted RBP14.98□□□□□ -0.01
PRPF4-201ENST00000374198 E2F4Q16254 413 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 CCAR1Q8IX12 1150 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms