RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 DLK2Q6UY11 383 aa16.97■□□□□ 0.31
TRAPPC3-201ENST00000373159 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
TRAPPC3-201ENST00000373159 ZC3H12CQ9C0D7 883 aaKnown RBP16.97■□□□□ 0.31
TRAPPC3-201ENST00000373159 RTL9Q8NET4 1388 aa16.97■□□□□ 0.31
TRAPPC3-201ENST00000373159 TAF1P21675 1872 aa16.97■□□□□ 0.31
TRAPPC3-201ENST00000373159 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
TRAPPC3-201ENST00000373159 ZIC5Q96T25 663 aa16.96■□□□□ 0.31
TRAPPC3-201ENST00000373159 SEC31BQ9NQW1 1179 aa16.96■□□□□ 0.31
TRAPPC3-201ENST00000373159 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.3
TRAPPC3-201ENST00000373159 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-201ENST00000373159 RGMBQ6NW40 437 aa16.95■□□□□ 0.3
TRAPPC3-201ENST00000373159 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
TRAPPC3-201ENST00000373159 CCDC191Q8NCU4 936 aa16.95■□□□□ 0.3
TRAPPC3-201ENST00000373159 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-201ENST00000373159 GBA2Q9HCG7 927 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC3-201ENST00000373159 IFT57Q9NWB7 429 aa16.95■□□□□ 0.3
TRAPPC3-201ENST00000373159 FAM155AB1AL88 458 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 PCCAP05165 728 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 GNAI1P63096 354 aa16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 MCOLN1Q9GZU1 580 aa16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 ANKIB1Q9P2G1 1089 aa16.94■□□□□ 0.3
TRAPPC3-201ENST00000373159 DDX60Q8IY21 1712 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 PDE8AO60658 829 aa16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 MYD88Q99836 296 aa16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 CHMP4AQ9BY43 222 aa16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 GGA1Q9UJY5 639 aa16.93■□□□□ 0.3
TRAPPC3-201ENST00000373159 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 G3V3G9 751 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 APAF1O14727 1248 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 UFL1O94874 794 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 KIF4BQ2VIQ3 1234 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
TRAPPC3-201ENST00000373159 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-201ENST00000373159 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-201ENST00000373159 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-201ENST00000373159 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
TRAPPC3-201ENST00000373159 COL4A1P02462 1669 aa16.91■□□□□ 0.3
TRAPPC3-201ENST00000373159 DDX58O95786 925 aaKnown RBP16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 KIF23Q02241 960 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 DGKZQ13574 1117 aa16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 RSBN1LQ6PCB5 846 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 GMLQ99445 158 aa16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 GGA3Q9NZ52 723 aa16.9■□□□□ 0.3
TRAPPC3-201ENST00000373159 SCARF1Q14162 830 aa16.89■□□□□ 0.29
TRAPPC3-201ENST00000373159 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
TRAPPC3-201ENST00000373159 PODNQ7Z5L7 613 aa16.89■□□□□ 0.29
TRAPPC3-201ENST00000373159 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
TRAPPC3-201ENST00000373159 JARID2Q92833 1246 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC3-201ENST00000373159 CASP8AP2Q9UKL3 1982 aa16.89■□□□□ 0.29
TRAPPC3-201ENST00000373159 XDHP47989 1333 aa16.89■□□□□ 0.29
TRAPPC3-201ENST00000373159 ZNF609O15014 1411 aa16.88■□□□□ 0.29
TRAPPC3-201ENST00000373159 ATP2B4P23634 1241 aa16.88■□□□□ 0.29
TRAPPC3-201ENST00000373159 CDCA5Q96FF9 252 aa16.88■□□□□ 0.29
TRAPPC3-201ENST00000373159 RNF186Q9NXI6 227 aa16.88■□□□□ 0.29
TRAPPC3-201ENST00000373159 ASTN2O75129 1339 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC3-201ENST00000373159 POLR2AP24928 1970 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-201ENST00000373159 SLC10A3P09131 477 aa16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 USP17L8P0C7I0 530 aa16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 FKBP1BP68106 108 aa16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 ANGEL2Q5VTE6 544 aaKnown RBP16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 CSRNP1Q96S65 589 aa16.87■□□□□ 0.29
TRAPPC3-201ENST00000373159 USP17L3A6NCW0 530 aa16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 USP17L4A6NCW7 530 aa16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 TRPA1O75762 1119 aa16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 USP17L1Q7RTZ2 530 aa16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 CDC5LQ99459 802 aaKnown RBP16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 MYOZ2Q9NPC6 264 aa16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
TRAPPC3-201ENST00000373159 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
TRAPPC3-201ENST00000373159 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
TRAPPC3-201ENST00000373159 TTLL11Q8NHH1 800 aa16.85■□□□□ 0.29
TRAPPC3-201ENST00000373159 SCN9AQ15858 1988 aa16.85■□□□□ 0.29
TRAPPC3-201ENST00000373159 PITPNM2Q9BZ72 1349 aa16.85■□□□□ 0.29
TRAPPC3-201ENST00000373159 IGKV5-2P06315 115 aa16.84■□□□□ 0.29
TRAPPC3-201ENST00000373159 CTSWP56202 376 aa16.84■□□□□ 0.29
TRAPPC3-201ENST00000373159 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
TRAPPC3-201ENST00000373159 MINPP1Q9UNW1 487 aa16.84■□□□□ 0.29
TRAPPC3-201ENST00000373159 WTIPA6NIX2 430 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-201ENST00000373159 SLC34A2O95436 690 aa16.83■□□□□ 0.28
TRAPPC3-201ENST00000373159 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
TRAPPC3-201ENST00000373159 RASAL3Q86YV0 1011 aa16.82■□□□□ 0.28
TRAPPC3-201ENST00000373159 GREM2Q9H772 168 aa16.82■□□□□ 0.28
TRAPPC3-201ENST00000373159 MED23Q9ULK4 1368 aa16.81■□□□□ 0.28
TRAPPC3-201ENST00000373159 H7C1W4 665 aa16.81■□□□□ 0.28
TRAPPC3-201ENST00000373159 MMP14P50281 582 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms