RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SRGAP3O43295 1099 aa19.69■□□□□ 0.74
C9orf78-201ENST00000372447 BBOX1O75936 387 aa19.69■□□□□ 0.74
C9orf78-201ENST00000372447 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
C9orf78-201ENST00000372447 ZNF594Q96JF6 807 aaPredicted RBP19.69■□□□□ 0.74
C9orf78-201ENST00000372447 CDC5LQ99459 802 aaKnown RBP19.69■□□□□ 0.74
C9orf78-201ENST00000372447 DLEC1Q9Y238 1755 aa19.68■□□□□ 0.74
C9orf78-201ENST00000372447 RFX5P48382 616 aaPredicted RBP19.68■□□□□ 0.74
C9orf78-201ENST00000372447 BCS1LQ9Y276 419 aa19.68■□□□□ 0.74
C9orf78-201ENST00000372447 SLC51AQ86UW1 340 aa19.67■□□□□ 0.74
C9orf78-201ENST00000372447 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
C9orf78-201ENST00000372447 C16orf71Q8IYS4 520 aaPredicted RBP19.67■□□□□ 0.74
C9orf78-201ENST00000372447 KLHDC4Q8TBB5 520 aa19.67■□□□□ 0.74
C9orf78-201ENST00000372447 C22orf23Q9BZE7 217 aa19.67■□□□□ 0.74
C9orf78-201ENST00000372447 C7orf43Q8WVR3 580 aa19.67■□□□□ 0.74
C9orf78-201ENST00000372447 APBB1O00213 710 aa19.66■□□□□ 0.74
C9orf78-201ENST00000372447 PPEF1O14829 653 aaPredicted RBP19.66■□□□□ 0.74
C9orf78-201ENST00000372447 SMARCA5O60264 1052 aaPredicted RBP19.66■□□□□ 0.74
C9orf78-201ENST00000372447 BRCA1P38398 1863 aaKnown RBP19.66■□□□□ 0.74
C9orf78-201ENST00000372447 PTPN12Q05209 780 aaKnown RBP19.66■□□□□ 0.74
C9orf78-201ENST00000372447 OLFM4Q6UX06 510 aa19.66■□□□□ 0.74
C9orf78-201ENST00000372447 ZNF219Q9P2Y4 722 aaPredicted RBP19.66■□□□□ 0.74
C9orf78-201ENST00000372447 SLX4Q8IY92 1834 aa19.66■□□□□ 0.74
C9orf78-201ENST00000372447 C21orf2O43822 256 aa19.65■□□□□ 0.74
C9orf78-201ENST00000372447 GSPT1P15170 499 aaKnown RBP19.65■□□□□ 0.74
C9orf78-201ENST00000372447 IGHMBP2P38935 993 aaKnown RBP19.65■□□□□ 0.74
C9orf78-201ENST00000372447 POLA2Q14181 598 aa19.65■□□□□ 0.74
C9orf78-201ENST00000372447 BECN1Q14457 450 aa19.65■□□□□ 0.74
C9orf78-201ENST00000372447 TAF7LQ5H9L4 462 aa19.65■□□□□ 0.74
C9orf78-201ENST00000372447 TTC22Q5TAA0 569 aa19.65■□□□□ 0.74
C9orf78-201ENST00000372447 SSH3Q8TE77 659 aa19.65■□□□□ 0.74
C9orf78-201ENST00000372447 BSDC1Q9NW68 430 aaPredicted RBP19.65■□□□□ 0.74
C9orf78-201ENST00000372447 PA2G4Q9UQ80 394 aaKnown RBP19.65■□□□□ 0.74
C9orf78-201ENST00000372447 ATP6V0A2Q9Y487 856 aa19.65■□□□□ 0.74
C9orf78-201ENST00000372447 LDHAL6AQ6ZMR3 332 aa19.64■□□□□ 0.73
C9orf78-201ENST00000372447 SP8Q8IXZ3 490 aa19.64■□□□□ 0.73
C9orf78-201ENST00000372447 OTUD7AQ8TE49 926 aaPredicted RBP19.64■□□□□ 0.73
C9orf78-201ENST00000372447 MPHOSPH8Q99549 860 aa19.64■□□□□ 0.73
C9orf78-201ENST00000372447 PUS3Q9BZE2 481 aaKnown RBP19.64■□□□□ 0.73
C9orf78-201ENST00000372447 BCL11AQ9H165 835 aa19.64■□□□□ 0.73
C9orf78-201ENST00000372447 YBX3P16989 372 aaKnown RBP eCLIP19.63■□□□□ 0.735e-8■■■□□ 16.9
C9orf78-201ENST00000372447 TBC1D9Q6ZT07 1266 aa19.63■□□□□ 0.73
C9orf78-201ENST00000372447 COPRSQ9NQ92 184 aa19.63■□□□□ 0.73
C9orf78-201ENST00000372447 EXOC6BQ9Y2D4 811 aa19.63■□□□□ 0.73
C9orf78-201ENST00000372447 NBR1Q14596 966 aa19.62■□□□□ 0.73
C9orf78-201ENST00000372447 TMC4Q7Z404 712 aa19.62■□□□□ 0.73
C9orf78-201ENST00000372447 CDC45O75419 566 aa19.62■□□□□ 0.73
C9orf78-201ENST00000372447 LRRC24Q50LG9 513 aa19.62■□□□□ 0.73
C9orf78-201ENST00000372447 SIL1Q9H173 461 aa19.62■□□□□ 0.73
C9orf78-201ENST00000372447 MINPP1Q9UNW1 487 aa19.62■□□□□ 0.73
C9orf78-201ENST00000372447 CACNA1SQ13698 1873 aa19.62■□□□□ 0.73
C9orf78-201ENST00000372447 LRRCC1Q9C099 1032 aa19.61■□□□□ 0.73
C9orf78-201ENST00000372447 CNNM1Q9NRU3 951 aa19.61■□□□□ 0.73
C9orf78-201ENST00000372447 RIPOR2Q9Y4F9 1068 aa19.61■□□□□ 0.73
C9orf78-201ENST00000372447 EYA2O00167 538 aa19.6■□□□□ 0.73
C9orf78-201ENST00000372447 RBM25P49756 843 aaKnown RBP19.6■□□□□ 0.73
C9orf78-201ENST00000372447 GPR162Q16538 588 aa19.6■□□□□ 0.73
C9orf78-201ENST00000372447 ATG9AQ7Z3C6 839 aa19.6■□□□□ 0.73
C9orf78-201ENST00000372447 OSBPL3Q9H4L5 887 aa19.6■□□□□ 0.73
C9orf78-201ENST00000372447 CC2D2BQ6DHV5 1058 aa19.59■□□□□ 0.73
C9orf78-201ENST00000372447 TMX4Q9H1E5 349 aaPredicted RBP19.59■□□□□ 0.73
C9orf78-201ENST00000372447 EIF5BO60841 1220 aaKnown RBP19.58■□□□□ 0.73
C9orf78-201ENST00000372447 SURF6O75683 361 aaKnown RBP19.58■□□□□ 0.73
C9orf78-201ENST00000372447 GPSM2P81274 684 aa19.58■□□□□ 0.73
C9orf78-201ENST00000372447 CHRNDQ07001 517 aa19.58■□□□□ 0.73
C9orf78-201ENST00000372447 CCDC93Q567U6 631 aa19.58■□□□□ 0.73
C9orf78-201ENST00000372447 SOGA3Q5TF21 947 aa19.58■□□□□ 0.73
C9orf78-201ENST00000372447 FBXO3Q9UK99 471 aa19.58■□□□□ 0.73
C9orf78-201ENST00000372447 NSFL1CQ9UNZ2 370 aaKnown RBP19.58■□□□□ 0.73
C9orf78-201ENST00000372447 CIAO1O76071 339 aa19.57■□□□□ 0.72
C9orf78-201ENST00000372447 HELBQ8NG08 1087 aaPredicted RBP19.57■□□□□ 0.72
C9orf78-201ENST00000372447 SNED1Q8TER0 1413 aa19.57■□□□□ 0.72
C9orf78-201ENST00000372447 PDE1AP54750 535 aa19.57■□□□□ 0.72
C9orf78-201ENST00000372447 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
C9orf78-201ENST00000372447 MPNDQ8N594 471 aa19.57■□□□□ 0.72
C9orf78-201ENST00000372447 ANKIB1Q9P2G1 1089 aa19.57■□□□□ 0.72
C9orf78-201ENST00000372447 SPEF2Q9C093 1822 aa19.57■□□□□ 0.72
C9orf78-201ENST00000372447 WTIPA6NIX2 430 aaPredicted RBP19.56■□□□□ 0.72
C9orf78-201ENST00000372447 TAF5LO75529 589 aa19.56■□□□□ 0.72
C9orf78-201ENST00000372447 SDSP20132 328 aa19.56■□□□□ 0.72
C9orf78-201ENST00000372447 G3BP1Q13283 466 aaKnown RBP eCLIP19.56■□□□□ 0.72
C9orf78-201ENST00000372447 TBC1D2Q9BYX2 928 aa19.56■□□□□ 0.72
C9orf78-201ENST00000372447 PODXL2Q9NZ53 605 aa19.56■□□□□ 0.72
C9orf78-201ENST00000372447 ARFGEF1Q9Y6D6 1849 aa19.56■□□□□ 0.72
C9orf78-201ENST00000372447 MROH5Q6ZUA9 1318 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 SALL3Q9BXA9 1300 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 RAB11FIP3O75154 756 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 IL15P40933 162 aaPredicted RBP19.55■□□□□ 0.72
C9orf78-201ENST00000372447 DPP8Q6V1X1 898 aaPredicted RBP19.55■□□□□ 0.72
C9orf78-201ENST00000372447 ANKRD2Q9GZV1 360 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 XDHP47989 1333 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 GRIPAP1Q4V328 841 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 METTL24Q5JXM2 366 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 ARHGAP27Q6ZUM4 889 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 POLLQ9UGP5 575 aa19.55■□□□□ 0.72
C9orf78-201ENST00000372447 LRRC37AA6NMS7 1700 aa19.54■□□□□ 0.72
C9orf78-201ENST00000372447 SNAP23O00161 211 aa19.54■□□□□ 0.72
C9orf78-201ENST00000372447 NFKBIEO00221 500 aa19.54■□□□□ 0.72
C9orf78-201ENST00000372447 VGLL2Q8N8G2 317 aa19.54■□□□□ 0.72
C9orf78-201ENST00000372447 GRIN3BO60391 1043 aa19.53■□□□□ 0.72
C9orf78-201ENST00000372447 SASH1O94885 1247 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms