RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
TMEM254-201ENST00000372273 DLEC1Q9Y238 1755 aa11.93□□□□□ -0.5
TMEM254-201ENST00000372273 SNED1Q8TER0 1413 aa11.93□□□□□ -0.5
TMEM254-201ENST00000372273 ANKRD18BA2A2Z9 1011 aa11.93□□□□□ -0.5
TMEM254-201ENST00000372273 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
TMEM254-201ENST00000372273 RABL6Q3YEC7 729 aaPredicted RBP11.93□□□□□ -0.5
TMEM254-201ENST00000372273 RTKN2Q8IZC4 609 aa11.93□□□□□ -0.5
TMEM254-201ENST00000372273 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
TMEM254-201ENST00000372273 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
TMEM254-201ENST00000372273 SIL1Q9H173 461 aa11.93□□□□□ -0.5
TMEM254-201ENST00000372273 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
TMEM254-201ENST00000372273 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
TMEM254-201ENST00000372273 LMNB1P20700 586 aa11.92□□□□□ -0.5
TMEM254-201ENST00000372273 KLRK1P26718 216 aa11.92□□□□□ -0.5
TMEM254-201ENST00000372273 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
TMEM254-201ENST00000372273 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM254-201ENST00000372273 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
TMEM254-201ENST00000372273 BSDC1Q9NW68 430 aaPredicted RBP11.92□□□□□ -0.5
TMEM254-201ENST00000372273 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
TMEM254-201ENST00000372273 TAF7LQ5H9L4 462 aa11.91□□□□□ -0.5
TMEM254-201ENST00000372273 TMX4Q9H1E5 349 aaPredicted RBP11.91□□□□□ -0.5
TMEM254-201ENST00000372273 CHRNDQ07001 517 aa11.91□□□□□ -0.5
TMEM254-201ENST00000372273 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
TMEM254-201ENST00000372273 TXNRD3Q86VQ6 643 aa11.91□□□□□ -0.5
TMEM254-201ENST00000372273 SKAP1Q86WV1 359 aa11.91□□□□□ -0.5
TMEM254-201ENST00000372273 TBC1D16Q8TBP0 767 aa11.91□□□□□ -0.5
TMEM254-201ENST00000372273 KCNQ5Q9NR82 932 aa11.91□□□□□ -0.5
TMEM254-201ENST00000372273 COL4A5P29400 1685 aa11.9□□□□□ -0.5
TMEM254-201ENST00000372273 KDM2BQ8NHM5 1336 aa11.9□□□□□ -0.5
TMEM254-201ENST00000372273 SRGAP3O43295 1099 aa11.9□□□□□ -0.5
TMEM254-201ENST00000372273 UFL1O94874 794 aa11.9□□□□□ -0.5
TMEM254-201ENST00000372273 GNAI3P08754 354 aa11.9□□□□□ -0.5
TMEM254-201ENST00000372273 RFX5P48382 616 aaPredicted RBP11.9□□□□□ -0.5
TMEM254-201ENST00000372273 SOGA3Q5TF21 947 aa11.9□□□□□ -0.5
TMEM254-201ENST00000372273 CNNM1Q9NRU3 951 aa11.9□□□□□ -0.5
TMEM254-201ENST00000372273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
TMEM254-201ENST00000372273 PPIP5K2O43314 1243 aa11.9□□□□□ -0.51
TMEM254-201ENST00000372273 GNAI2P04899 355 aa11.9□□□□□ -0.51
TMEM254-201ENST00000372273 IARSP41252 1262 aaKnown RBP11.9□□□□□ -0.51
TMEM254-201ENST00000372273 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.51
TMEM254-201ENST00000372273 DOK7Q18PE1 504 aa11.9□□□□□ -0.51
TMEM254-201ENST00000372273 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.51
TMEM254-201ENST00000372273 PSMD1Q99460 953 aa11.9□□□□□ -0.51
TMEM254-201ENST00000372273 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.51
TMEM254-201ENST00000372273 RTL9Q8NET4 1388 aa11.89□□□□□ -0.51
TMEM254-201ENST00000372273 PDE4AP27815 886 aa11.89□□□□□ -0.51
TMEM254-201ENST00000372273 WASHC4Q2M389 1173 aa11.89□□□□□ -0.51
TMEM254-201ENST00000372273 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
TMEM254-201ENST00000372273 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
TMEM254-201ENST00000372273 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
TMEM254-201ENST00000372273 RIPOR2Q9Y4F9 1068 aa11.88□□□□□ -0.51
TMEM254-201ENST00000372273 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
TMEM254-201ENST00000372273 DDNO94850 711 aaPredicted RBP11.88□□□□□ -0.51
TMEM254-201ENST00000372273 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
TMEM254-201ENST00000372273 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
TMEM254-201ENST00000372273 RTFDC1Q9BY42 306 aaPredicted RBP11.88□□□□□ -0.51
TMEM254-201ENST00000372273 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
TMEM254-201ENST00000372273 NOP58Q9Y2X3 529 aaKnown RBP11.88□□□□□ -0.51
TMEM254-201ENST00000372273 DUOX1Q9NRD9 1551 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
TMEM254-201ENST00000372273 BACH2Q9BYV9 841 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 XDHP47989 1333 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 RAD17O75943 681 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 AAMPQ13685 434 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 ATG9AQ7Z3C6 839 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 TMC4Q7Z404 712 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
TMEM254-201ENST00000372273 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 NMRK2Q9NPI5 230 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 JAG2Q9Y219 1238 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
TMEM254-201ENST00000372273 IGHDP01880 384 aa11.85□□□□□ -0.51
TMEM254-201ENST00000372273 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
TMEM254-201ENST00000372273 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
TMEM254-201ENST00000372273 ZC3H12CQ9C0D7 883 aaKnown RBP11.85□□□□□ -0.51
TMEM254-201ENST00000372273 MYH3P11055 1940 aa11.85□□□□□ -0.51
TMEM254-201ENST00000372273 EYA2O00167 538 aa11.85□□□□□ -0.51
TMEM254-201ENST00000372273 KCNJ4P48050 445 aa11.85□□□□□ -0.51
TMEM254-201ENST00000372273 GJA3Q9Y6H8 435 aa11.85□□□□□ -0.51
TMEM254-201ENST00000372273 FZD9O00144 591 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 APBB1O00213 710 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 GYG1P46976 350 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 ATP8B2P98198 1209 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 CXCL9Q07325 125 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 MTX1Q13505 466 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 VGLL2Q8N8G2 317 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 MXD3Q9BW11 206 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-201ENST00000372273 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-201ENST00000372273 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-201ENST00000372273 SPEF2Q9C093 1822 aa11.84□□□□□ -0.51
TMEM254-201ENST00000372273 SHTN1A0MZ66 631 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms