RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ARHGAP27Q6ZUM4 889 aa20.32■□□□□ 0.84
TMEM53-203ENST00000372242 TMX4Q9H1E5 349 aaPredicted RBP20.32■□□□□ 0.84
TMEM53-203ENST00000372242 NSFL1CQ9UNZ2 370 aaKnown RBP20.32■□□□□ 0.84
TMEM53-203ENST00000372242 GPSM2P81274 684 aa20.31■□□□□ 0.84
TMEM53-203ENST00000372242 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
TMEM53-203ENST00000372242 HELBQ8NG08 1087 aaPredicted RBP20.31■□□□□ 0.84
TMEM53-203ENST00000372242 COPRSQ9NQ92 184 aa20.31■□□□□ 0.84
TMEM53-203ENST00000372242 RIPOR2Q9Y4F9 1068 aa20.31■□□□□ 0.84
TMEM53-203ENST00000372242 SNED1Q8TER0 1413 aa20.3■□□□□ 0.84
TMEM53-203ENST00000372242 CHRNDQ07001 517 aa20.3■□□□□ 0.84
TMEM53-203ENST00000372242 CC2D2BQ6DHV5 1058 aa20.3■□□□□ 0.84
TMEM53-203ENST00000372242 ANKIB1Q9P2G1 1089 aa20.3■□□□□ 0.84
TMEM53-203ENST00000372242 WTIPA6NIX2 430 aaPredicted RBP20.3■□□□□ 0.84
TMEM53-203ENST00000372242 EYA2O00167 538 aa20.3■□□□□ 0.84
TMEM53-203ENST00000372242 MPNDQ8N594 471 aa20.3■□□□□ 0.84
TMEM53-203ENST00000372242 NFKBIEO00221 500 aa20.29■□□□□ 0.84
TMEM53-203ENST00000372242 TAF5LO75529 589 aa20.29■□□□□ 0.84
TMEM53-203ENST00000372242 DPP8Q6V1X1 898 aaPredicted RBP20.29■□□□□ 0.84
TMEM53-203ENST00000372242 ATG9AQ7Z3C6 839 aa20.29■□□□□ 0.84
TMEM53-203ENST00000372242 RTKN2Q8IZC4 609 aa20.29■□□□□ 0.84
TMEM53-203ENST00000372242 FER1L6Q2WGJ9 1857 aa20.29■□□□□ 0.84
TMEM53-203ENST00000372242 GRIN3BO60391 1043 aa20.28■□□□□ 0.84
TMEM53-203ENST00000372242 RASSF7Q02833 373 aa20.28■□□□□ 0.84
TMEM53-203ENST00000372242 SNAP23O00161 211 aa20.27■□□□□ 0.84
TMEM53-203ENST00000372242 SURF6O75683 361 aaKnown RBP20.27■□□□□ 0.84
TMEM53-203ENST00000372242 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
TMEM53-203ENST00000372242 HMMRO75330 724 aa20.27■□□□□ 0.84
TMEM53-203ENST00000372242 AAMPQ13685 434 aa20.27■□□□□ 0.84
TMEM53-203ENST00000372242 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
TMEM53-203ENST00000372242 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
TMEM53-203ENST00000372242 LTBP1Q14766 1721 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 XDHP47989 1333 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 CIAO1O76071 339 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 GPR101Q96P66 508 aaPredicted RBP20.26■□□□□ 0.83
TMEM53-203ENST00000372242 TAOK3Q9H2K8 898 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
TMEM53-203ENST00000372242 A0A1B0GUL6 1792 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 C6orf229H3BNL8 230 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 UFL1O94874 794 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 NEFLP07196 543 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 FKBP4Q02790 459 aaKnown RBP eCLIP20.25■□□□□ 0.83
TMEM53-203ENST00000372242 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 ZNF277Q9NRM2 450 aaPredicted RBP20.25■□□□□ 0.83
TMEM53-203ENST00000372242 FBXO3Q9UK99 471 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 IL15P40933 162 aaPredicted RBP20.25■□□□□ 0.83
TMEM53-203ENST00000372242 PRELPP51888 382 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
TMEM53-203ENST00000372242 GRIPAP1Q4V328 841 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 TBC1D16Q8TBP0 767 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 PSMD1Q99460 953 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 GGA1Q9UJY5 639 aa20.25■□□□□ 0.83
TMEM53-203ENST00000372242 OS9Q13438 667 aaPredicted RBP20.24■□□□□ 0.83
TMEM53-203ENST00000372242 VGLL2Q8N8G2 317 aa20.24■□□□□ 0.83
TMEM53-203ENST00000372242 RTFDC1Q9BY42 306 aaPredicted RBP20.24■□□□□ 0.83
TMEM53-203ENST00000372242 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
TMEM53-203ENST00000372242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.24■□□□□ 0.83
TMEM53-203ENST00000372242 APBB1O00213 710 aa20.23■□□□□ 0.83
TMEM53-203ENST00000372242 PDE8BO95263 885 aa20.23■□□□□ 0.83
TMEM53-203ENST00000372242 KCNJ4P48050 445 aa20.23■□□□□ 0.83
TMEM53-203ENST00000372242 TFCP2Q12800 502 aa20.23■□□□□ 0.83
TMEM53-203ENST00000372242 CEP126Q9P2H0 1117 aa20.23■□□□□ 0.83
TMEM53-203ENST00000372242 ZNF804BA4D1E1 1349 aa20.22■□□□□ 0.83
TMEM53-203ENST00000372242 LTBP3Q9NS15 1303 aa20.22■□□□□ 0.83
TMEM53-203ENST00000372242 SASH1O94885 1247 aa20.22■□□□□ 0.83
TMEM53-203ENST00000372242 ATP2B4P23634 1241 aa20.22■□□□□ 0.83
TMEM53-203ENST00000372242 RIMBP2O15034 1052 aa20.21■□□□□ 0.83
TMEM53-203ENST00000372242 KLRK1P26718 216 aa20.21■□□□□ 0.83
TMEM53-203ENST00000372242 LEMD3Q9Y2U8 911 aa20.21■□□□□ 0.83
TMEM53-203ENST00000372242 CCDC88AQ3V6T2 1871 aa20.2■□□□□ 0.82
TMEM53-203ENST00000372242 AOC3Q16853 763 aa20.2■□□□□ 0.82
TMEM53-203ENST00000372242 WASHC4Q2M389 1173 aa20.2■□□□□ 0.82
TMEM53-203ENST00000372242 SUPT20HQ8NEM7 779 aa20.2■□□□□ 0.82
TMEM53-203ENST00000372242 TXNRD3Q86VQ6 643 aa20.2■□□□□ 0.82
TMEM53-203ENST00000372242 SBF1O95248 1867 aa20.2■□□□□ 0.82
TMEM53-203ENST00000372242 PPIP5K2O43314 1243 aa20.19■□□□□ 0.82
TMEM53-203ENST00000372242 IGHDP01880 384 aa20.19■□□□□ 0.82
TMEM53-203ENST00000372242 LMNB1P20700 586 aa20.19■□□□□ 0.82
TMEM53-203ENST00000372242 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
TMEM53-203ENST00000372242 HDAC1Q13547 482 aaPredicted RBP20.19■□□□□ 0.82
TMEM53-203ENST00000372242 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
TMEM53-203ENST00000372242 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
TMEM53-203ENST00000372242 ZC3H12CQ9C0D7 883 aaKnown RBP20.18■□□□□ 0.82
TMEM53-203ENST00000372242 DCTPP1Q9H773 170 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 KIAA2012Q0VF49 1180 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 HSP90AB4PQ58FF6 505 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 EYA3Q99504 573 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 RNF181Q9P0P0 153 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 COL4A5P29400 1685 aa20.18■□□□□ 0.82
TMEM53-203ENST00000372242 FGFR2P21802 821 aa20.17■□□□□ 0.82
TMEM53-203ENST00000372242 TIMM10P62072 90 aa20.17■□□□□ 0.82
TMEM53-203ENST00000372242 ATP2B3Q16720 1220 aa20.17■□□□□ 0.82
TMEM53-203ENST00000372242 C9orf131Q5VYM1 1079 aa20.17■□□□□ 0.82
TMEM53-203ENST00000372242 RWDD1Q9H446 243 aaPredicted RBP20.17■□□□□ 0.82
TMEM53-203ENST00000372242 DOK7Q18PE1 504 aa20.16■□□□□ 0.82
TMEM53-203ENST00000372242 RHPN1Q8TCX5 695 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms