RNA–Protein interactions for RNA: ENST00000371842.2

BRD3-203, Transcript of bromodomain containing 3, humanhuman

TSL 5

Gene BRD3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-203ENST00000371842 CHPF2Q9P2E5 772 aa19.17■□□□□ 0.66
BRD3-203ENST00000371842 ATP5J2-PTCD1G3V325 749 aa19.16■□□□□ 0.66
BRD3-203ENST00000371842 SLC10A3P09131 477 aa19.16■□□□□ 0.66
BRD3-203ENST00000371842 TMPOP42166 694 aaKnown RBP19.16■□□□□ 0.66
BRD3-203ENST00000371842 KIF4BQ2VIQ3 1234 aa19.16■□□□□ 0.66
BRD3-203ENST00000371842 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
BRD3-203ENST00000371842 ISCA1Q9BUE6 129 aa19.16■□□□□ 0.66
BRD3-203ENST00000371842 TBC1D16Q8TBP0 767 aa19.15■□□□□ 0.66
BRD3-203ENST00000371842 GGA3Q9NZ52 723 aa19.15■□□□□ 0.66
BRD3-203ENST00000371842 VIL1P09327 827 aaKnown RBP19.14■□□□□ 0.65
BRD3-203ENST00000371842 PLBD2Q8NHP8 589 aa19.14■□□□□ 0.65
BRD3-203ENST00000371842 ANKRD13DQ6ZTN6 518 aa19.13■□□□□ 0.65
BRD3-203ENST00000371842 SULF1Q8IWU6 871 aa19.13■□□□□ 0.65
BRD3-203ENST00000371842 CDCA5Q96FF9 252 aa19.13■□□□□ 0.65
BRD3-203ENST00000371842 EYA3Q99504 573 aa19.13■□□□□ 0.65
BRD3-203ENST00000371842 CHL1O00533 1208 aa19.12■□□□□ 0.65
BRD3-203ENST00000371842 RPS8P62241 208 aaKnown RBP19.12■□□□□ 0.65
BRD3-203ENST00000371842 NEUROD2Q15784 382 aa19.11■□□□□ 0.65
BRD3-203ENST00000371842 CTU1Q7Z7A3 348 aaKnown RBP19.11■□□□□ 0.65
BRD3-203ENST00000371842 RASAL3Q86YV0 1011 aa19.11■□□□□ 0.65
BRD3-203ENST00000371842 IRS4O14654 1257 aaPredicted RBP19.1■□□□□ 0.65
BRD3-203ENST00000371842 LMOD3Q0VAK6 560 aa19.1■□□□□ 0.65
BRD3-203ENST00000371842 HDGFL1Q5TGJ6 251 aa19.1■□□□□ 0.65
BRD3-203ENST00000371842 ZC3H12CQ9C0D7 883 aaKnown RBP19.1■□□□□ 0.65
BRD3-203ENST00000371842 SEC31BQ9NQW1 1179 aa19.1■□□□□ 0.65
BRD3-203ENST00000371842 LAS1LQ9Y4W2 734 aaKnown RBP19.1■□□□□ 0.65
BRD3-203ENST00000371842 PAPPA2Q9BXP8 1791 aa19.1■□□□□ 0.65
BRD3-203ENST00000371842 ZNF280AP59817 542 aaPredicted RBP19.09■□□□□ 0.65
BRD3-203ENST00000371842 SCARF1Q14162 830 aa19.09■□□□□ 0.65
BRD3-203ENST00000371842 ANGEL2Q5VTE6 544 aaKnown RBP19.09■□□□□ 0.65
BRD3-203ENST00000371842 PODXL2Q9NZ53 605 aa19.09■□□□□ 0.65
BRD3-203ENST00000371842 SCAF8Q9UPN6 1271 aaKnown RBP19.09■□□□□ 0.65
BRD3-203ENST00000371842 UFL1O94874 794 aa19.08■□□□□ 0.64
BRD3-203ENST00000371842 MOB2Q70IA6 237 aa19.08■□□□□ 0.64
BRD3-203ENST00000371842 CCDC146Q8IYE0 955 aa19.08■□□□□ 0.64
BRD3-203ENST00000371842 TRIM35Q9UPQ4 493 aa19.08■□□□□ 0.64
BRD3-203ENST00000371842 TRIM28Q13263 835 aaKnown RBP19.07■□□□□ 0.64
BRD3-203ENST00000371842 RSBN1LQ6PCB5 846 aaPredicted RBP19.07■□□□□ 0.64
BRD3-203ENST00000371842 DBF4Q9UBU7 674 aaPredicted RBP19.07■□□□□ 0.64
BRD3-203ENST00000371842 HPS5Q9UPZ3 1129 aa19.07■□□□□ 0.64
BRD3-203ENST00000371842 MKI67P46013 3256 aaKnown RBP19.07■□□□□ 0.64
BRD3-203ENST00000371842 ZNF609O15014 1411 aa19.07■□□□□ 0.64
BRD3-203ENST00000371842 ZNF646O15015 1829 aaPredicted RBP19.07■□□□□ 0.64
BRD3-203ENST00000371842 AGBL3Q8NEM8 1001 aa19.06■□□□□ 0.64
BRD3-203ENST00000371842 GMLQ99445 158 aa19.06■□□□□ 0.64
BRD3-203ENST00000371842 ANKIB1Q9P2G1 1089 aa19.06■□□□□ 0.64
BRD3-203ENST00000371842 GGA1Q9UJY5 639 aa19.06■□□□□ 0.64
BRD3-203ENST00000371842 SPEF2Q9C093 1822 aa19.05■□□□□ 0.64
BRD3-203ENST00000371842 G3V3G9 751 aa19.05■□□□□ 0.64
BRD3-203ENST00000371842 DCAF8Q5TAQ9 597 aa19.05■□□□□ 0.64
BRD3-203ENST00000371842 PRPF38BQ5VTL8 546 aaKnown RBP19.05■□□□□ 0.64
BRD3-203ENST00000371842 REM2Q8IYK8 340 aaPredicted RBP19.05■□□□□ 0.64
BRD3-203ENST00000371842 ZBTB38Q8NAP3 1195 aaPredicted RBP19.05■□□□□ 0.64
BRD3-203ENST00000371842 MYOZ2Q9NPC6 264 aa19.05■□□□□ 0.64
BRD3-203ENST00000371842 CENPFP49454 3210 aa19.05■□□□□ 0.64
BRD3-203ENST00000371842 TBC1D8O95759 1140 aa19.04■□□□□ 0.64
BRD3-203ENST00000371842 HOXB7P09629 217 aa19.04■□□□□ 0.64
BRD3-203ENST00000371842 PRAMEF18Q5VWM3 479 aa19.04■□□□□ 0.64
BRD3-203ENST00000371842 HYPKQ9NX55 129 aa19.04■□□□□ 0.64
BRD3-203ENST00000371842 WTIPA6NIX2 430 aaPredicted RBP19.03■□□□□ 0.64
BRD3-203ENST00000371842 UBE2Q2LH0YL09 131 aa19.03■□□□□ 0.64
BRD3-203ENST00000371842 USP17L8P0C7I0 530 aa19.03■□□□□ 0.64
BRD3-203ENST00000371842 FKBP1BP68106 108 aa19.03■□□□□ 0.64
BRD3-203ENST00000371842 DUSP27Q5VZP5 1158 aa19.03■□□□□ 0.64
BRD3-203ENST00000371842 ZNF296Q8WUU4 475 aaPredicted RBP19.03■□□□□ 0.64
BRD3-203ENST00000371842 JARID2Q92833 1246 aaPredicted RBP19.03■□□□□ 0.64
BRD3-203ENST00000371842 CCDC85AQ96PX6 553 aaPredicted RBP19.03■□□□□ 0.64
BRD3-203ENST00000371842 PITPNM2Q9BZ72 1349 aa19.02■□□□□ 0.64
BRD3-203ENST00000371842 RIC3Q7Z5B4 369 aa19.02■□□□□ 0.64
BRD3-203ENST00000371842 MYH3P11055 1940 aa19.02■□□□□ 0.63
BRD3-203ENST00000371842 HTTP42858 3142 aa19.01■□□□□ 0.63
BRD3-203ENST00000371842 NBPF9Q3BBW0 867 aa19.01■□□□□ 0.63
BRD3-203ENST00000371842 PHAXQ9H814 394 aaKnown RBP19.01■□□□□ 0.63
BRD3-203ENST00000371842 HDAC9Q9UKV0 1011 aa19.01■□□□□ 0.63
BRD3-203ENST00000371842 BRCA2P51587 3418 aa19■□□□□ 0.63
BRD3-203ENST00000371842 PKN2Q16513 984 aaKnown RBP19■□□□□ 0.63
BRD3-203ENST00000371842 CCDC152Q4G0S7 254 aa19■□□□□ 0.63
BRD3-203ENST00000371842 MYD88Q99836 296 aa19■□□□□ 0.63
BRD3-203ENST00000371842 XDHP47989 1333 aa19■□□□□ 0.63
BRD3-203ENST00000371842 USP17L3A6NCW0 530 aa18.99■□□□□ 0.63
BRD3-203ENST00000371842 USP17L4A6NCW7 530 aa18.99■□□□□ 0.63
BRD3-203ENST00000371842 USP17L1Q7RTZ2 530 aa18.99■□□□□ 0.63
BRD3-203ENST00000371842 MXD3Q9BW11 206 aa18.99■□□□□ 0.63
BRD3-203ENST00000371842 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
BRD3-203ENST00000371842 PDE8AO60658 829 aa18.98■□□□□ 0.63
BRD3-203ENST00000371842 PCCAP05165 728 aaPredicted RBP18.98■□□□□ 0.63
BRD3-203ENST00000371842 TM4SF4P48230 202 aa18.98■□□□□ 0.63
BRD3-203ENST00000371842 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
BRD3-203ENST00000371842 RALBP1Q15311 655 aa18.98■□□□□ 0.63
BRD3-203ENST00000371842 PODNQ7Z5L7 613 aa18.98■□□□□ 0.63
BRD3-203ENST00000371842 RUNDC1Q96C34 613 aa18.98■□□□□ 0.63
BRD3-203ENST00000371842 GPR25O00155 361 aa18.97■□□□□ 0.63
BRD3-203ENST00000371842 ATP2B4P23634 1241 aa18.97■□□□□ 0.63
BRD3-203ENST00000371842 GOLGA2Q08379 1002 aa18.97■□□□□ 0.63
BRD3-203ENST00000371842 ANKRD18AQ8IVF6 992 aa18.97■□□□□ 0.63
BRD3-203ENST00000371842 CCDC191Q8NCU4 936 aa18.97■□□□□ 0.63
BRD3-203ENST00000371842 R3HDMLQ9H3Y0 253 aa18.97■□□□□ 0.63
BRD3-203ENST00000371842 WNT10BO00744 389 aa18.96■□□□□ 0.63
BRD3-203ENST00000371842 HSP90B1P14625 803 aaKnown RBP18.96■□□□□ 0.63
BRD3-203ENST00000371842 TTLL12Q14166 644 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms