RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 KCNJ6P48051 423 aa13.67□□□□□ -0.22
SMARCA1-201ENST00000371121 CCDC30Q5VVM6 783 aa13.67□□□□□ -0.22
SMARCA1-201ENST00000371121 SASH1O94885 1247 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 DPF2Q92785 391 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 EYA1Q99502 592 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 MRC1P22897 1456 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 DHX16O60231 1041 aaKnown RBP13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 FBXW7Q969H0 707 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 STK31Q9BXU1 1019 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
SMARCA1-201ENST00000371121 ETF1P62495 437 aaKnown RBP13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 AEBP2Q6ZN18 517 aaPredicted RBP13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 RGS22Q8NE09 1264 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 PHLPP2Q6ZVD8 1323 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 MTX1Q13505 466 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 EAF2Q96CJ1 260 aaPredicted RBP13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 CCDC34Q96HJ3 373 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 WDR24Q96S15 920 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 ECHDC1Q9NTX5 307 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 TECPR2O15040 1411 aa13.65□□□□□ -0.22
SMARCA1-201ENST00000371121 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 SOX12O15370 315 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 ATP1A3P13637 1013 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 PDCP20941 246 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 GORABQ5T7V8 394 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 RNF20Q5VTR2 975 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 STOX1Q6ZVD7 989 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 IFNKQ9P0W0 207 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 IMPACTQ9P2X3 320 aa13.65□□□□□ -0.23
SMARCA1-201ENST00000371121 USP6P35125 1406 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 ZSCAN26Q16670 478 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 SRLQ86TD4 932 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 CARD6Q9BX69 1037 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 DNAI1Q9UI46 699 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 PLEKHG2Q9H7P9 1386 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 INTS13Q9NVM9 706 aa13.64□□□□□ -0.23
SMARCA1-201ENST00000371121 PPFIA3O75145 1194 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 NWD2Q9ULI1 1742 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 TAF5LO75529 589 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 ADAM21Q9UKJ8 722 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 NDUFA8P51970 172 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 NSUN7Q8NE18 718 aaKnown RBP13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 EVI5LQ96CN4 794 aa13.63□□□□□ -0.23
SMARCA1-201ENST00000371121 ECM29Q5VYK3 1845 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 MAP2K7O14733 419 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 ANXA1P04083 346 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 FAM160A1Q05DH4 1040 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 PACS2Q86VP3 889 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 LRRC2Q9BYS8 371 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 GSDMDP57764 484 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 IQUBQ8NA54 791 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 BPIFA3Q9BQP9 254 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 PCDHA7Q9UN72 937 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 EFCAB8A8MWE9 144 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 TAF7LQ5H9L4 462 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 CCDC158Q5M9N0 1113 aa13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
SMARCA1-201ENST00000371121 ACEP12821 1306 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 ZNF609O15014 1411 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 A0A0U1RQJ8 604 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 PI4KAP2A4QPH2 592 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 N4BP1O75113 896 aaKnown RBP13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 TMCO3Q6UWJ1 677 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 TXLNBQ8N3L3 684 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 FBXO18Q8NFZ0 1043 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 RASSF4Q9H2L5 321 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 NDUFB9Q9Y6M9 179 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 ROBO2Q9HCK4 1378 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 A0A1B0GVL5 298 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 TMEM232C9JQI7 657 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 KCNQ3O43525 872 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 Q6ZUG5 572 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 PARD6BQ9BYG5 372 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 CHPF2Q9P2E5 772 aa13.61□□□□□ -0.23
SMARCA1-201ENST00000371121 RGPD2P0DJD1 1756 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms