RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 LBX1P52954 281 aa16.98■□□□□ 0.31
RPF1-201ENST00000370654 PI4KAP1Q8N8J0 262 aa16.98■□□□□ 0.31
RPF1-201ENST00000370654 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
RPF1-201ENST00000370654 AOC2O75106 756 aa16.97■□□□□ 0.31
RPF1-201ENST00000370654 CELF2O95319 508 aaKnown RBP16.97■□□□□ 0.31
RPF1-201ENST00000370654 CWF19L2Q2TBE0 894 aaKnown RBP16.97■□□□□ 0.31
RPF1-201ENST00000370654 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
RPF1-201ENST00000370654 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
RPF1-201ENST00000370654 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
RPF1-201ENST00000370654 PODXL2Q9NZ53 605 aa16.97■□□□□ 0.31
RPF1-201ENST00000370654 UFL1O94874 794 aa16.96■□□□□ 0.31
RPF1-201ENST00000370654 HSPA8P11142 646 aaKnown RBP16.96■□□□□ 0.31
RPF1-201ENST00000370654 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
RPF1-201ENST00000370654 CCDC27Q2M243 656 aa16.96■□□□□ 0.31
RPF1-201ENST00000370654 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
RPF1-201ENST00000370654 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
RPF1-201ENST00000370654 THSD7BQ9C0I4 1608 aa16.96■□□□□ 0.31
RPF1-201ENST00000370654 ASTN2O75129 1339 aaPredicted RBP16.95■□□□□ 0.3
RPF1-201ENST00000370654 H7C1D1 291 aa16.95■□□□□ 0.3
RPF1-201ENST00000370654 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
RPF1-201ENST00000370654 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
RPF1-201ENST00000370654 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
RPF1-201ENST00000370654 SAPCD2Q86UD0 394 aa16.95■□□□□ 0.3
RPF1-201ENST00000370654 DPF2Q92785 391 aa16.95■□□□□ 0.3
RPF1-201ENST00000370654 AIDAQ96BJ3 306 aa16.95■□□□□ 0.3
RPF1-201ENST00000370654 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
RPF1-201ENST00000370654 ANKIB1Q9P2G1 1089 aa16.95■□□□□ 0.3
RPF1-201ENST00000370654 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
RPF1-201ENST00000370654 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
RPF1-201ENST00000370654 TTLL11Q8NHH1 800 aa16.94■□□□□ 0.3
RPF1-201ENST00000370654 ZC3H15Q8WU90 426 aaKnown RBP16.94■□□□□ 0.3
RPF1-201ENST00000370654 EYA3Q99504 573 aa16.94■□□□□ 0.3
RPF1-201ENST00000370654 NEURL1BA8MQ27 555 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 VIL1P09327 827 aaKnown RBP16.93■□□□□ 0.3
RPF1-201ENST00000370654 CTSWP56202 376 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 ZIC5Q96T25 663 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
RPF1-201ENST00000370654 GREM2Q9H772 168 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 MRS2Q9HD23 443 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 GGA1Q9UJY5 639 aa16.93■□□□□ 0.3
RPF1-201ENST00000370654 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
RPF1-201ENST00000370654 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
RPF1-201ENST00000370654 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
RPF1-201ENST00000370654 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
RPF1-201ENST00000370654 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
RPF1-201ENST00000370654 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
RPF1-201ENST00000370654 H7C1W4 665 aa16.91■□□□□ 0.3
RPF1-201ENST00000370654 MAP2K1Q02750 393 aaPredicted RBP16.91■□□□□ 0.3
RPF1-201ENST00000370654 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
RPF1-201ENST00000370654 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
RPF1-201ENST00000370654 RPS12P25398 132 aaKnown RBP16.9■□□□□ 0.3
RPF1-201ENST00000370654 ECE1P42892 770 aa16.9■□□□□ 0.3
RPF1-201ENST00000370654 CASP7P55210 303 aa16.9■□□□□ 0.3
RPF1-201ENST00000370654 UBE3BQ7Z3V4 1068 aa16.9■□□□□ 0.3
RPF1-201ENST00000370654 MINPP1Q9UNW1 487 aa16.9■□□□□ 0.3
RPF1-201ENST00000370654 IL16Q14005 1332 aa16.9■□□□□ 0.3
RPF1-201ENST00000370654 VAMP4O75379 141 aa16.89■□□□□ 0.3
RPF1-201ENST00000370654 HSP90B1P14625 803 aaKnown RBP16.89■□□□□ 0.3
RPF1-201ENST00000370654 FLIIQ13045 1269 aa16.89■□□□□ 0.3
RPF1-201ENST00000370654 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.3
RPF1-201ENST00000370654 MXD3Q9BW11 206 aa16.89■□□□□ 0.3
RPF1-201ENST00000370654 XDHP47989 1333 aa16.89■□□□□ 0.29
RPF1-201ENST00000370654 EXOSC9Q06265 439 aaKnown RBP16.89■□□□□ 0.29
RPF1-201ENST00000370654 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
RPF1-201ENST00000370654 KRT26Q7Z3Y9 468 aa16.89■□□□□ 0.29
RPF1-201ENST00000370654 TXNRD3Q86VQ6 643 aa16.89■□□□□ 0.29
RPF1-201ENST00000370654 GMLQ99445 158 aa16.89■□□□□ 0.29
RPF1-201ENST00000370654 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
RPF1-201ENST00000370654 ATP2B4P23634 1241 aa16.88■□□□□ 0.29
RPF1-201ENST00000370654 NEXNQ0ZGT2 675 aa16.88■□□□□ 0.29
RPF1-201ENST00000370654 GCKRQ14397 625 aa16.88■□□□□ 0.29
RPF1-201ENST00000370654 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
RPF1-201ENST00000370654 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
RPF1-201ENST00000370654 MYH3P11055 1940 aa16.87■□□□□ 0.29
RPF1-201ENST00000370654 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
RPF1-201ENST00000370654 G3V3G9 751 aa16.87■□□□□ 0.29
RPF1-201ENST00000370654 KLRK1P26718 216 aa16.87■□□□□ 0.29
RPF1-201ENST00000370654 MAP2K2P36507 400 aa16.87■□□□□ 0.29
RPF1-201ENST00000370654 ZNF280AP59817 542 aaPredicted RBP16.87■□□□□ 0.29
RPF1-201ENST00000370654 DCAF8Q5TAQ9 597 aa16.87■□□□□ 0.29
RPF1-201ENST00000370654 HHIPL1Q96JK4 782 aa16.87■□□□□ 0.29
RPF1-201ENST00000370654 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
RPF1-201ENST00000370654 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
RPF1-201ENST00000370654 ZNF646O15015 1829 aaPredicted RBP16.86■□□□□ 0.29
RPF1-201ENST00000370654 PSME4Q14997 1843 aa16.86■□□□□ 0.29
RPF1-201ENST00000370654 F6X3S4 739 aa16.86■□□□□ 0.29
RPF1-201ENST00000370654 HUNKP57058 714 aa16.86■□□□□ 0.29
RPF1-201ENST00000370654 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
RPF1-201ENST00000370654 SCARF1Q14162 830 aa16.86■□□□□ 0.29
RPF1-201ENST00000370654 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
RPF1-201ENST00000370654 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
RPF1-201ENST00000370654 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
RPF1-201ENST00000370654 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
RPF1-201ENST00000370654 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
RPF1-201ENST00000370654 ANP32CO43423 234 aa16.85■□□□□ 0.29
RPF1-201ENST00000370654 CCT4P50991 539 aaKnown RBP16.85■□□□□ 0.29
RPF1-201ENST00000370654 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
RPF1-201ENST00000370654 AGBL3Q8NEM8 1001 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms