RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 IARSP41252 1262 aaKnown RBP18.56■□□□□ 0.56
COL9A1-204ENST00000370496 GPSM2P81274 684 aa18.56■□□□□ 0.56
COL9A1-204ENST00000370496 XDHP47989 1333 aa18.56■□□□□ 0.56
COL9A1-204ENST00000370496 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
COL9A1-204ENST00000370496 GNAI2P04899 355 aa18.55■□□□□ 0.56
COL9A1-204ENST00000370496 ZNF594Q96JF6 807 aaPredicted RBP18.55■□□□□ 0.56
COL9A1-204ENST00000370496 PPIP5K2O43314 1243 aa18.55■□□□□ 0.56
COL9A1-204ENST00000370496 UFL1O94874 794 aa18.55■□□□□ 0.56
COL9A1-204ENST00000370496 MVPQ14764 893 aaKnown RBP18.55■□□□□ 0.56
COL9A1-204ENST00000370496 RTFDC1Q9BY42 306 aaPredicted RBP18.55■□□□□ 0.56
COL9A1-204ENST00000370496 CNNM1Q9NRU3 951 aa18.55■□□□□ 0.56
COL9A1-204ENST00000370496 GGA1Q9UJY5 639 aa18.55■□□□□ 0.56
COL9A1-204ENST00000370496 C6orf229H3BNL8 230 aa18.54■□□□□ 0.56
COL9A1-204ENST00000370496 RRP1P56182 461 aaKnown RBP18.54■□□□□ 0.56
COL9A1-204ENST00000370496 AOC3Q16853 763 aa18.54■□□□□ 0.56
COL9A1-204ENST00000370496 LDHAL6AQ6ZMR3 332 aa18.54■□□□□ 0.56
COL9A1-204ENST00000370496 LARGE2Q8N3Y3 721 aa18.54■□□□□ 0.56
COL9A1-204ENST00000370496 MINPP1Q9UNW1 487 aa18.54■□□□□ 0.56
COL9A1-204ENST00000370496 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
COL9A1-204ENST00000370496 COL4A5P29400 1685 aa18.53■□□□□ 0.56
COL9A1-204ENST00000370496 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
COL9A1-204ENST00000370496 JDP2Q8WYK2 163 aa18.53■□□□□ 0.56
COL9A1-204ENST00000370496 EYA3Q99504 573 aa18.53■□□□□ 0.56
COL9A1-204ENST00000370496 PODXL2Q9NZ53 605 aa18.53■□□□□ 0.56
COL9A1-204ENST00000370496 DDX19BQ9UMR2 479 aa18.53■□□□□ 0.56
COL9A1-204ENST00000370496 CHRNDQ07001 517 aa18.52■□□□□ 0.55
COL9A1-204ENST00000370496 NIM1KQ8IY84 436 aa18.52■□□□□ 0.55
COL9A1-204ENST00000370496 TBC1D16Q8TBP0 767 aa18.52■□□□□ 0.55
COL9A1-204ENST00000370496 ANKRD2Q9GZV1 360 aa18.52■□□□□ 0.55
COL9A1-204ENST00000370496 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.55
COL9A1-204ENST00000370496 KCNJ4P48050 445 aa18.51■□□□□ 0.55
COL9A1-204ENST00000370496 C20orf194Q5TEA3 1177 aa18.51■□□□□ 0.55
COL9A1-204ENST00000370496 ZNF526Q8TF50 670 aaPredicted RBP18.51■□□□□ 0.55
COL9A1-204ENST00000370496 POLLQ9UGP5 575 aa18.51■□□□□ 0.55
COL9A1-204ENST00000370496 SRGAP3O43295 1099 aa18.5■□□□□ 0.55
COL9A1-204ENST00000370496 ATP2B4P23634 1241 aa18.5■□□□□ 0.55
COL9A1-204ENST00000370496 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
COL9A1-204ENST00000370496 WASHC4Q2M389 1173 aa18.5■□□□□ 0.55
COL9A1-204ENST00000370496 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
COL9A1-204ENST00000370496 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
COL9A1-204ENST00000370496 VPS33BQ9H267 617 aa18.5■□□□□ 0.55
COL9A1-204ENST00000370496 RIMBP2O15034 1052 aa18.49■□□□□ 0.55
COL9A1-204ENST00000370496 ZBTB7BO15156 539 aaPredicted RBP18.49■□□□□ 0.55
COL9A1-204ENST00000370496 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
COL9A1-204ENST00000370496 MED23Q9ULK4 1368 aa18.49■□□□□ 0.55
COL9A1-204ENST00000370496 RFX5P48382 616 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-204ENST00000370496 MTX1Q13505 466 aa18.48■□□□□ 0.55
COL9A1-204ENST00000370496 HELBQ8NG08 1087 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-204ENST00000370496 PUS3Q9BZE2 481 aaKnown RBP18.48■□□□□ 0.55
COL9A1-204ENST00000370496 SIL1Q9H173 461 aa18.48■□□□□ 0.55
COL9A1-204ENST00000370496 MROH5Q6ZUA9 1318 aa18.48■□□□□ 0.55
COL9A1-204ENST00000370496 KDM2BQ8NHM5 1336 aa18.48■□□□□ 0.55
COL9A1-204ENST00000370496 G3V3G9 751 aa18.47■□□□□ 0.55
COL9A1-204ENST00000370496 TAF5LO75529 589 aa18.47■□□□□ 0.55
COL9A1-204ENST00000370496 METTL24Q5JXM2 366 aa18.47■□□□□ 0.55
COL9A1-204ENST00000370496 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
COL9A1-204ENST00000370496 ZC3H12CQ9C0D7 883 aaKnown RBP18.47■□□□□ 0.55
COL9A1-204ENST00000370496 LEMD3Q9Y2U8 911 aa18.47■□□□□ 0.55
COL9A1-204ENST00000370496 ZNF804BA4D1E1 1349 aa18.47■□□□□ 0.55
COL9A1-204ENST00000370496 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
COL9A1-204ENST00000370496 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
COL9A1-204ENST00000370496 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
COL9A1-204ENST00000370496 DPY19L2Q6NUT2 758 aa18.46■□□□□ 0.55
COL9A1-204ENST00000370496 ZNF784Q8NCA9 323 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-204ENST00000370496 ZNF541Q9H0D2 1346 aa18.46■□□□□ 0.55
COL9A1-204ENST00000370496 EYA2O00167 538 aa18.45■□□□□ 0.54
COL9A1-204ENST00000370496 DBNDD1Q9H9R9 158 aa18.45■□□□□ 0.54
COL9A1-204ENST00000370496 GPBP1L1Q9HC44 474 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-204ENST00000370496 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
COL9A1-204ENST00000370496 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
COL9A1-204ENST00000370496 PNMA6EA0A0J9YXQ4 647 aa18.44■□□□□ 0.54
COL9A1-204ENST00000370496 FZD9O00144 591 aa18.44■□□□□ 0.54
COL9A1-204ENST00000370496 ECE2O60344 883 aa18.44■□□□□ 0.54
COL9A1-204ENST00000370496 DOK7Q18PE1 504 aa18.44■□□□□ 0.54
COL9A1-204ENST00000370496 ZNRF3Q9ULT6 936 aa18.44■□□□□ 0.54
COL9A1-204ENST00000370496 RIPOR2Q9Y4F9 1068 aa18.44■□□□□ 0.54
COL9A1-204ENST00000370496 PSME4Q14997 1843 aa18.44■□□□□ 0.54
COL9A1-204ENST00000370496 GLTPD2A6NH11 291 aa18.43■□□□□ 0.54
COL9A1-204ENST00000370496 CIAO1O76071 339 aa18.43■□□□□ 0.54
COL9A1-204ENST00000370496 COPRSQ9NQ92 184 aa18.43■□□□□ 0.54
COL9A1-204ENST00000370496 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
COL9A1-204ENST00000370496 WTIPA6NIX2 430 aaPredicted RBP18.42■□□□□ 0.54
COL9A1-204ENST00000370496 KLRK1P26718 216 aa18.42■□□□□ 0.54
COL9A1-204ENST00000370496 CEP85Q6P2H3 762 aa18.42■□□□□ 0.54
COL9A1-204ENST00000370496 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
COL9A1-204ENST00000370496 ARAP2Q8WZ64 1704 aa18.42■□□□□ 0.54
COL9A1-204ENST00000370496 SCN9AQ15858 1988 aa18.42■□□□□ 0.54
COL9A1-204ENST00000370496 SNAP23O00161 211 aa18.42■□□□□ 0.54
COL9A1-204ENST00000370496 IL15P40933 162 aaPredicted RBP18.42■□□□□ 0.54
COL9A1-204ENST00000370496 GJA3Q9Y6H8 435 aa18.42■□□□□ 0.54
COL9A1-204ENST00000370496 DDNO94850 711 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-204ENST00000370496 PDE8BO95263 885 aa18.41■□□□□ 0.54
COL9A1-204ENST00000370496 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
COL9A1-204ENST00000370496 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
COL9A1-204ENST00000370496 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
COL9A1-204ENST00000370496 VGLL2Q8N8G2 317 aa18.41■□□□□ 0.54
COL9A1-204ENST00000370496 SSH3Q8TE77 659 aa18.41■□□□□ 0.54
COL9A1-204ENST00000370496 SCN4AP35499 1836 aa18.4■□□□□ 0.54
COL9A1-204ENST00000370496 YDJCA8MPS7 323 aa18.4■□□□□ 0.54
COL9A1-204ENST00000370496 RAD17O75943 681 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms