RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 KMT5BQ4FZB7 885 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 NWD2Q9ULI1 1742 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 CHL1O00533 1208 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 TRIM27P14373 513 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 LIG1P18858 919 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 PROSER3Q2NL68 480 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 ATF7IPQ6VMQ6 1270 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 SNX21Q969T3 373 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 ANKRD23Q86SG2 305 aa12.8□□□□□ -0.36
TWNK-202ENST00000370228 RRP15Q9Y3B9 282 aaKnown RBP12.8□□□□□ -0.36
TWNK-202ENST00000370228 H0YHG0 523 aa12.8□□□□□ -0.36
TWNK-202ENST00000370228 SARNPP82979 210 aaKnown RBP12.8□□□□□ -0.36
TWNK-202ENST00000370228 NAA30Q147X3 362 aaPredicted RBP12.8□□□□□ -0.36
TWNK-202ENST00000370228 DNAJC14Q6Y2X3 702 aaPredicted RBP12.8□□□□□ -0.36
TWNK-202ENST00000370228 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
TWNK-202ENST00000370228 CCDC196A0A1B0GTZ2 297 aa12.79□□□□□ -0.36
TWNK-202ENST00000370228 FAM184AQ8NB25 1140 aa12.79□□□□□ -0.36
TWNK-202ENST00000370228 RBM5P52756 815 aaKnown RBP eCLIP12.79□□□□□ -0.36
TWNK-202ENST00000370228 SSH1Q8WYL5 1049 aa12.79□□□□□ -0.36
TWNK-202ENST00000370228 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
TWNK-202ENST00000370228 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
TWNK-202ENST00000370228 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
TWNK-202ENST00000370228 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
TWNK-202ENST00000370228 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
TWNK-202ENST00000370228 NOM1Q5C9Z4 860 aaKnown RBP12.79□□□□□ -0.36
TWNK-202ENST00000370228 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
TWNK-202ENST00000370228 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
TWNK-202ENST00000370228 EZH2Q15910 746 aaKnown RBP12.78□□□□□ -0.36
TWNK-202ENST00000370228 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 CHPF2Q9P2E5 772 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 CTAGE5O15320 804 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 SIK1P57059 783 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 ZSCAN26Q16670 478 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 RNF214Q8ND24 703 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 KIAA1524Q8TCG1 905 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 GPT2Q8TD30 523 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
TWNK-202ENST00000370228 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
TWNK-202ENST00000370228 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 LRRC37A3O60309 1634 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
TWNK-202ENST00000370228 MAGEA9P43362 315 aa12.77□□□□□ -0.36
TWNK-202ENST00000370228 ITPK1Q13572 414 aa12.77□□□□□ -0.36
TWNK-202ENST00000370228 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.36
TWNK-202ENST00000370228 G2E3Q7L622 706 aa12.77□□□□□ -0.36
TWNK-202ENST00000370228 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.36
TWNK-202ENST00000370228 PALLDQ8WX93 1383 aa12.77□□□□□ -0.36
TWNK-202ENST00000370228 ANKRD33BA6NCL7 494 aa12.77□□□□□ -0.37
TWNK-202ENST00000370228 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
TWNK-202ENST00000370228 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.37
TWNK-202ENST00000370228 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
TWNK-202ENST00000370228 F6X3S4 739 aa12.77□□□□□ -0.37
TWNK-202ENST00000370228 ANKRD45Q5TZF3 282 aa12.77□□□□□ -0.37
TWNK-202ENST00000370228 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
TWNK-202ENST00000370228 SYCE3A1L190 88 aa12.76□□□□□ -0.37
TWNK-202ENST00000370228 COQ9O75208 318 aa12.76□□□□□ -0.37
TWNK-202ENST00000370228 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
TWNK-202ENST00000370228 CCT2P78371 535 aaKnown RBP12.76□□□□□ -0.37
TWNK-202ENST00000370228 C1QTNF12Q5T7M4 302 aa12.76□□□□□ -0.37
TWNK-202ENST00000370228 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
TWNK-202ENST00000370228 MCTP1Q6DN14 999 aa12.76□□□□□ -0.37
TWNK-202ENST00000370228 SLC4A10Q6U841 1118 aa12.76□□□□□ -0.37
TWNK-202ENST00000370228 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
TWNK-202ENST00000370228 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
TWNK-202ENST00000370228 SF3B2Q13435 895 aaKnown RBP12.75□□□□□ -0.37
TWNK-202ENST00000370228 PROM2Q8N271 834 aa12.75□□□□□ -0.37
TWNK-202ENST00000370228 TBC1D2BQ9UPU7 963 aa12.75□□□□□ -0.37
TWNK-202ENST00000370228 ABCC6O95255 1503 aa12.75□□□□□ -0.37
TWNK-202ENST00000370228 VAMP4O75379 141 aa12.75□□□□□ -0.37
TWNK-202ENST00000370228 BCL9O00512 1426 aa12.75□□□□□ -0.37
TWNK-202ENST00000370228 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
TWNK-202ENST00000370228 PIK3R5Q8WYR1 880 aa12.75□□□□□ -0.37
TWNK-202ENST00000370228 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
TWNK-202ENST00000370228 TEX35Q5T0J7 233 aa12.74□□□□□ -0.37
TWNK-202ENST00000370228 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
TWNK-202ENST00000370228 PAIP2Q9BPZ3 127 aaKnown RBP12.74□□□□□ -0.37
TWNK-202ENST00000370228 NUCKS1Q9H1E3 243 aaKnown RBP12.74□□□□□ -0.37
TWNK-202ENST00000370228 ZBTB3Q9H5J0 574 aa12.74□□□□□ -0.37
TWNK-202ENST00000370228 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
TWNK-202ENST00000370228 TTC19Q6DKK2 380 aaPredicted RBP12.73□□□□□ -0.37
TWNK-202ENST00000370228 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 TXNRD1Q16881 649 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 FBXO38Q6PIJ6 1188 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 BICDL1Q6ZP65 573 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 LINC00116Q8NCU8 138 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 WWC3Q9ULE0 1092 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 SHANK3Q9BYB0 1731 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 GNPATO15228 680 aa12.73□□□□□ -0.37
TWNK-202ENST00000370228 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms