RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 ITGA6P23229 1130 aa18.35■□□□□ 0.53
SSR4-203ENST00000370086 SCNN1DP51172 638 aa18.35■□□□□ 0.53
SSR4-203ENST00000370086 APLP1P51693 650 aa18.35■□□□□ 0.53
SSR4-203ENST00000370086 BSDC1Q9NW68 430 aaPredicted RBP18.35■□□□□ 0.53
SSR4-203ENST00000370086 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
SSR4-203ENST00000370086 RAD17O75943 681 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 UFL1O94874 794 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 CIAPIN1Q6FI81 312 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 CHADLQ6NUI6 762 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 EYA3Q99504 573 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 DBNDD1Q9H9R9 158 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 SMC4Q9NTJ3 1288 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 C9orf78Q9NZ63 289 aaPredicted RBP18.34■□□□□ 0.53
SSR4-203ENST00000370086 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
SSR4-203ENST00000370086 XDHP47989 1333 aa18.33■□□□□ 0.53
SSR4-203ENST00000370086 WTIPA6NIX2 430 aaPredicted RBP18.33■□□□□ 0.52
SSR4-203ENST00000370086 CT47B1P0C2W7 299 aaPredicted RBP18.33■□□□□ 0.52
SSR4-203ENST00000370086 EPS15P42566 896 aa18.33■□□□□ 0.52
SSR4-203ENST00000370086 DOK7Q18PE1 504 aa18.33■□□□□ 0.52
SSR4-203ENST00000370086 EAPPQ56P03 285 aaPredicted RBP18.33■□□□□ 0.52
SSR4-203ENST00000370086 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
SSR4-203ENST00000370086 PSME4Q14997 1843 aa18.33■□□□□ 0.52
SSR4-203ENST00000370086 ECE2O60344 883 aa18.32■□□□□ 0.52
SSR4-203ENST00000370086 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
SSR4-203ENST00000370086 IGHMBP2P38935 993 aaKnown RBP18.32■□□□□ 0.52
SSR4-203ENST00000370086 HTRA3P83110 453 aa18.32■□□□□ 0.52
SSR4-203ENST00000370086 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSR4-203ENST00000370086 ZC3H12CQ9C0D7 883 aaKnown RBP18.32■□□□□ 0.52
SSR4-203ENST00000370086 KCNQ5Q9NR82 932 aa18.32■□□□□ 0.52
SSR4-203ENST00000370086 UTYO14607 1347 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
SSR4-203ENST00000370086 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 GMPSP49915 693 aaPredicted RBP18.31■□□□□ 0.52
SSR4-203ENST00000370086 TNIP1Q15025 636 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 LMBR1LQ6UX01 489 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 KAZALD1Q96I82 304 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 SUCLG2Q96I99 432 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 GPRC5DQ9NZD1 345 aa18.31■□□□□ 0.52
SSR4-203ENST00000370086 PNMA8AQ86V59 439 aaPredicted RBP18.3■□□□□ 0.52
SSR4-203ENST00000370086 CHMP3Q9Y3E7 222 aa18.3■□□□□ 0.52
SSR4-203ENST00000370086 PSMD14O00487 310 aa18.29■□□□□ 0.52
SSR4-203ENST00000370086 CCT4P50991 539 aaKnown RBP18.29■□□□□ 0.52
SSR4-203ENST00000370086 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
SSR4-203ENST00000370086 BRPF1P55201 1214 aaPredicted RBP18.29■□□□□ 0.52
SSR4-203ENST00000370086 IFIT5Q13325 482 aaKnown RBP18.29■□□□□ 0.52
SSR4-203ENST00000370086 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
SSR4-203ENST00000370086 MPHOSPH8Q99549 860 aa18.29■□□□□ 0.52
SSR4-203ENST00000370086 NOB1Q9ULX3 412 aaKnown RBP18.29■□□□□ 0.52
SSR4-203ENST00000370086 CLEC11AQ9Y240 323 aa18.29■□□□□ 0.52
SSR4-203ENST00000370086 ZNF646O15015 1829 aaPredicted RBP18.28■□□□□ 0.52
SSR4-203ENST00000370086 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
SSR4-203ENST00000370086 SHTN1A0MZ66 631 aa18.27■□□□□ 0.52
SSR4-203ENST00000370086 ITGBL1O95965 494 aaPredicted RBP18.27■□□□□ 0.52
SSR4-203ENST00000370086 ZNF594Q96JF6 807 aaPredicted RBP18.27■□□□□ 0.52
SSR4-203ENST00000370086 USP44Q9H0E7 712 aa18.27■□□□□ 0.52
SSR4-203ENST00000370086 MED23Q9ULK4 1368 aa18.27■□□□□ 0.51
SSR4-203ENST00000370086 PASKQ96RG2 1323 aa18.26■□□□□ 0.51
SSR4-203ENST00000370086 G3V3G9 751 aa18.26■□□□□ 0.51
SSR4-203ENST00000370086 CHRNDQ07001 517 aa18.26■□□□□ 0.51
SSR4-203ENST00000370086 CCDC57Q2TAC2 916 aa18.26■□□□□ 0.51
SSR4-203ENST00000370086 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
SSR4-203ENST00000370086 MAP1SQ66K74 1059 aaPredicted RBP18.26■□□□□ 0.51
SSR4-203ENST00000370086 USP50Q70EL3 339 aaPredicted RBP18.26■□□□□ 0.51
SSR4-203ENST00000370086 ANKRD2Q9GZV1 360 aa18.26■□□□□ 0.51
SSR4-203ENST00000370086 ADARB2Q9NS39 739 aaKnown RBP18.26■□□□□ 0.51
SSR4-203ENST00000370086 LEMD3Q9Y2U8 911 aa18.26■□□□□ 0.51
SSR4-203ENST00000370086 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
SSR4-203ENST00000370086 BICC1Q9H694 974 aaKnown RBP18.25■□□□□ 0.51
SSR4-203ENST00000370086 CNOT7Q9UIV1 285 aaKnown RBP18.25■□□□□ 0.51
SSR4-203ENST00000370086 ZNF804BA4D1E1 1349 aa18.24■□□□□ 0.51
SSR4-203ENST00000370086 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
SSR4-203ENST00000370086 KLRK1P26718 216 aa18.24■□□□□ 0.51
SSR4-203ENST00000370086 RABL6Q3YEC7 729 aaPredicted RBP18.24■□□□□ 0.51
SSR4-203ENST00000370086 CNTROBQ8N137 903 aa18.24■□□□□ 0.51
SSR4-203ENST00000370086 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
SSR4-203ENST00000370086 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
SSR4-203ENST00000370086 DPF2Q92785 391 aa18.24■□□□□ 0.51
SSR4-203ENST00000370086 SNAP23O00161 211 aa18.23■□□□□ 0.51
SSR4-203ENST00000370086 TAF5LO75529 589 aa18.23■□□□□ 0.51
SSR4-203ENST00000370086 HIRAP54198 1017 aaPredicted RBP18.23■□□□□ 0.51
SSR4-203ENST00000370086 LDHAL6AQ6ZMR3 332 aa18.23■□□□□ 0.51
SSR4-203ENST00000370086 MICALL2Q8IY33 904 aa18.23■□□□□ 0.51
SSR4-203ENST00000370086 TRPM4Q8TD43 1214 aa18.23■□□□□ 0.51
SSR4-203ENST00000370086 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
SSR4-203ENST00000370086 POLR2AP24928 1970 aaKnown RBP18.22■□□□□ 0.51
SSR4-203ENST00000370086 TRPM7Q96QT4 1865 aa18.22■□□□□ 0.51
SSR4-203ENST00000370086 BCAR3O75815 825 aa18.22■□□□□ 0.51
SSR4-203ENST00000370086 TAF7LQ5H9L4 462 aa18.22■□□□□ 0.51
SSR4-203ENST00000370086 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
SSR4-203ENST00000370086 IRS2Q9Y4H2 1338 aa18.22■□□□□ 0.51
SSR4-203ENST00000370086 H7C1D1 291 aa18.21■□□□□ 0.51
SSR4-203ENST00000370086 RPS12P25398 132 aaKnown RBP18.21■□□□□ 0.51
SSR4-203ENST00000370086 KLRG1Q96E93 195 aa18.21■□□□□ 0.51
SSR4-203ENST00000370086 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.51
SSR4-203ENST00000370086 CNNM1Q9NRU3 951 aa18.21■□□□□ 0.51
SSR4-203ENST00000370086 ZBED9Q6R2W3 1325 aa18.21■□□□□ 0.51
SSR4-203ENST00000370086 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
SSR4-203ENST00000370086 USP17L3A6NCW0 530 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms