RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
TPM3-211ENST00000368531 GPSM2P81274 684 aa17.29■□□□□ 0.36
TPM3-211ENST00000368531 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
TPM3-211ENST00000368531 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
TPM3-211ENST00000368531 MPNDQ8N594 471 aa17.29■□□□□ 0.36
TPM3-211ENST00000368531 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
TPM3-211ENST00000368531 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
TPM3-211ENST00000368531 LRRC37AA6NMS7 1700 aa17.29■□□□□ 0.36
TPM3-211ENST00000368531 RASSF7Q02833 373 aa17.28■□□□□ 0.36
TPM3-211ENST00000368531 CHRNDQ07001 517 aa17.28■□□□□ 0.36
TPM3-211ENST00000368531 POLA2Q14181 598 aa17.28■□□□□ 0.36
TPM3-211ENST00000368531 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
TPM3-211ENST00000368531 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
TPM3-211ENST00000368531 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
TPM3-211ENST00000368531 A0A1B0GUL6 1792 aa17.28■□□□□ 0.36
TPM3-211ENST00000368531 EYA2O00167 538 aa17.27■□□□□ 0.36
TPM3-211ENST00000368531 GRIN3BO60391 1043 aa17.27■□□□□ 0.36
TPM3-211ENST00000368531 TAF5LO75529 589 aa17.27■□□□□ 0.36
TPM3-211ENST00000368531 SURF6O75683 361 aaKnown RBP17.27■□□□□ 0.36
TPM3-211ENST00000368531 NEFLP07196 543 aa17.27■□□□□ 0.36
TPM3-211ENST00000368531 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.36
TPM3-211ENST00000368531 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
TPM3-211ENST00000368531 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
TPM3-211ENST00000368531 RIPOR2Q9Y4F9 1068 aa17.27■□□□□ 0.36
TPM3-211ENST00000368531 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
TPM3-211ENST00000368531 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
TPM3-211ENST00000368531 HMMRO75330 724 aa17.26■□□□□ 0.35
TPM3-211ENST00000368531 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
TPM3-211ENST00000368531 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
TPM3-211ENST00000368531 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
TPM3-211ENST00000368531 SNAP23O00161 211 aa17.25■□□□□ 0.35
TPM3-211ENST00000368531 NFKBIEO00221 500 aa17.25■□□□□ 0.35
TPM3-211ENST00000368531 UFL1O94874 794 aa17.25■□□□□ 0.35
TPM3-211ENST00000368531 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.358e-7■■□□□ 13.8
TPM3-211ENST00000368531 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
TPM3-211ENST00000368531 TAOK3Q9H2K8 898 aa17.25■□□□□ 0.35
TPM3-211ENST00000368531 SBF1O95248 1867 aa17.24■□□□□ 0.35
TPM3-211ENST00000368531 XDHP47989 1333 aa17.24■□□□□ 0.35
TPM3-211ENST00000368531 KCNJ4P48050 445 aa17.24■□□□□ 0.35
TPM3-211ENST00000368531 FKBP4Q02790 459 aaKnown RBP eCLIP17.24■□□□□ 0.35
TPM3-211ENST00000368531 ATG9AQ7Z3C6 839 aa17.24■□□□□ 0.35
TPM3-211ENST00000368531 ZNF277Q9NRM2 450 aaPredicted RBP17.24■□□□□ 0.35
TPM3-211ENST00000368531 POLLQ9UGP5 575 aa17.24■□□□□ 0.35
TPM3-211ENST00000368531 GGA1Q9UJY5 639 aa17.24■□□□□ 0.35
TPM3-211ENST00000368531 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
TPM3-211ENST00000368531 MROH5Q6ZUA9 1318 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 APBB1O00213 710 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 CIAO1O76071 339 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 TBC1D16Q8TBP0 767 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
TPM3-211ENST00000368531 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 ATP2B4P23634 1241 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 IL15P40933 162 aaPredicted RBP17.22■□□□□ 0.35
TPM3-211ENST00000368531 AAMPQ13685 434 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 CEP126Q9P2H0 1117 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
TPM3-211ENST00000368531 PRELPP51888 382 aa17.21■□□□□ 0.35
TPM3-211ENST00000368531 TFCP2Q12800 502 aa17.21■□□□□ 0.35
TPM3-211ENST00000368531 PSMD1Q99460 953 aa17.21■□□□□ 0.35
TPM3-211ENST00000368531 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
TPM3-211ENST00000368531 ZNF804BA4D1E1 1349 aa17.21■□□□□ 0.34
TPM3-211ENST00000368531 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
TPM3-211ENST00000368531 PDE8BO95263 885 aa17.2■□□□□ 0.34
TPM3-211ENST00000368531 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
TPM3-211ENST00000368531 AOC3Q16853 763 aa17.2■□□□□ 0.34
TPM3-211ENST00000368531 WASHC4Q2M389 1173 aa17.2■□□□□ 0.34
TPM3-211ENST00000368531 RTFDC1Q9BY42 306 aaPredicted RBP17.2■□□□□ 0.34
TPM3-211ENST00000368531 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
TPM3-211ENST00000368531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
TPM3-211ENST00000368531 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
TPM3-211ENST00000368531 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 SASH1O94885 1247 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 LMNB1P20700 586 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 KLRK1P26718 216 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 VGLL2Q8N8G2 317 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 EYA3Q99504 573 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 ZC3H12CQ9C0D7 883 aaKnown RBP17.19■□□□□ 0.34
TPM3-211ENST00000368531 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
TPM3-211ENST00000368531 CHD4Q14839 1912 aa17.18■□□□□ 0.34
TPM3-211ENST00000368531 DICER1Q9UPY3 1922 aaKnown RBP17.18■□□□□ 0.34
TPM3-211ENST00000368531 G3V3G9 751 aa17.18■□□□□ 0.34
TPM3-211ENST00000368531 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
TPM3-211ENST00000368531 DCAF8Q5TAQ9 597 aa17.18■□□□□ 0.34
TPM3-211ENST00000368531 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
TPM3-211ENST00000368531 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
TPM3-211ENST00000368531 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
TPM3-211ENST00000368531 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
TPM3-211ENST00000368531 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
TPM3-211ENST00000368531 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
TPM3-211ENST00000368531 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
TPM3-211ENST00000368531 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
TPM3-211ENST00000368531 IGHDP01880 384 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 SLC5A1P13866 664 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms