RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 UTP14CQ5TAP6 766 aaKnown RBP15.28■□□□□ 0.04
PTPRK-204ENST00000368210 SLC26A6Q9BXS9 759 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 F13A1P00488 732 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 TFCP2Q12800 502 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 UVSSAQ2YD98 709 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 INTS4Q96HW7 963 aaKnown RBP15.28■□□□□ 0.04
PTPRK-204ENST00000368210 ZNF76P36508 570 aa15.27■□□□□ 0.04
PTPRK-204ENST00000368210 CREB3L3Q68CJ9 461 aa15.27■□□□□ 0.04
PTPRK-204ENST00000368210 SLF2Q8IX21 1173 aa15.27■□□□□ 0.04
PTPRK-204ENST00000368210 TSPY2A6NKD2 308 aa15.27■□□□□ 0.03
PTPRK-204ENST00000368210 C6orf229H3BNL8 230 aa15.27■□□□□ 0.03
PTPRK-204ENST00000368210 ATP6V1AP38606 617 aa15.27■□□□□ 0.03
PTPRK-204ENST00000368210 SYCP1Q15431 976 aa15.27■□□□□ 0.03
PTPRK-204ENST00000368210 ARHGAP29Q52LW3 1261 aa15.27■□□□□ 0.03
PTPRK-204ENST00000368210 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.03
PTPRK-204ENST00000368210 USP19O94966 1318 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 ZBTB43O43298 467 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 TOP1P11387 765 aaKnown RBP15.26■□□□□ 0.03
PTPRK-204ENST00000368210 HSPA2P54652 639 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 PDE4BQ07343 736 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 ANKRD18AQ8IVF6 992 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 ERVK-7P63135 1459 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 SARNPP82979 210 aaKnown RBP15.26■□□□□ 0.03
PTPRK-204ENST00000368210 DNM1Q05193 864 aaKnown RBP15.26■□□□□ 0.03
PTPRK-204ENST00000368210 NBPF6Q5VWK0 638 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 NBPF5PQ86XG9 351 aaPredicted RBP15.26■□□□□ 0.03
PTPRK-204ENST00000368210 BANK1Q8NDB2 785 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 NBPF4Q96M43 638 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 RAD50Q92878 1312 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 KIF5BP33176 963 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 LMAN1P49257 510 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 DDB1Q16531 1140 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 BAG3O95817 575 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 LTKP29376 864 aa15.26■□□□□ 0.03
PTPRK-204ENST00000368210 WTAPQ15007 396 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 IQSEC3Q9UPP2 1182 aaPredicted RBP15.25■□□□□ 0.03
PTPRK-204ENST00000368210 IGSF3O75054 1194 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 SPTY2D1Q68D10 685 aaPredicted RBP15.25■□□□□ 0.03
PTPRK-204ENST00000368210 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 CYP7A1P22680 504 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 NOLC1Q14978 699 aaKnown RBP eCLIP15.25■□□□□ 0.033e-6■■■□□ 16.8
PTPRK-204ENST00000368210 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
PTPRK-204ENST00000368210 KRT23Q9C075 422 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
PTPRK-204ENST00000368210 KIAA0232Q92628 1395 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 PNMA6EA0A0J9YXQ4 647 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 MICALCLQ6ZW33 695 aa15.25■□□□□ 0.03
PTPRK-204ENST00000368210 RNF113AO15541 343 aaKnown RBP15.24■□□□□ 0.03
PTPRK-204ENST00000368210 CCDC102BQ68D86 513 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 CCDC171Q6TFL3 1326 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 A0A1B0GUL7 405 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 RFC4P35249 363 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 ZSCAN12O43309 604 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 CCDC181Q5TID7 509 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 HOMEZQ8IX15 550 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 SMARCC1Q92922 1105 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-204ENST00000368210 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 RAB34Q9BZG1 259 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 CNNM2Q9H8M5 875 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 KDM5DQ9BY66 1539 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 TTC37Q6PGP7 1564 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 ARHGEF10O15013 1369 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 TRMT2AQ8IZ69 625 aaKnown RBP15.24■□□□□ 0.03
PTPRK-204ENST00000368210 MYCBPQ99417 103 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-204ENST00000368210 METTL22Q9BUU2 404 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-204ENST00000368210 CRNKL1Q9BZJ0 848 aaKnown RBP15.24■□□□□ 0.03
PTPRK-204ENST00000368210 SLC4A4Q9Y6R1 1079 aa15.24■□□□□ 0.03
PTPRK-204ENST00000368210 NEMFO60524 1076 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 NBPF7P0C2Y1 421 aaPredicted RBP15.23■□□□□ 0.03
PTPRK-204ENST00000368210 ZNF622Q969S3 477 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTPRK-204ENST00000368210 DACT1Q9NYF0 836 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 IRS4O14654 1257 aaPredicted RBP15.23■□□□□ 0.03
PTPRK-204ENST00000368210 CCDC96Q2M329 555 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 MYO6Q9UM54 1294 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 GOLGA6L10A6NI86 522 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 PRC1O43663 620 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 DMTNQ08495 405 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 RUFY3Q7L099 469 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 ESR2Q92731 530 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 NLRP3Q96P20 1036 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 UTP14AQ9BVJ6 771 aaKnown RBP15.23■□□□□ 0.03
PTPRK-204ENST00000368210 KAT14Q9H8E8 782 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 ZFYVE16Q7Z3T8 1539 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 KIAA1328Q86T90 577 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 C10orf67Q8IYJ2 551 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 PLBD2Q8NHP8 589 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 KCNG4Q8TDN1 519 aa15.23■□□□□ 0.03
PTPRK-204ENST00000368210 ABCC4O15439 1325 aa15.22■□□□□ 0.03
PTPRK-204ENST00000368210 GSDMDP57764 484 aa15.22■□□□□ 0.03
PTPRK-204ENST00000368210 DHX32Q7L7V1 743 aaKnown RBP15.22■□□□□ 0.03
PTPRK-204ENST00000368210 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
PTPRK-204ENST00000368210 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
PTPRK-204ENST00000368210 MYOM2P54296 1465 aa15.22■□□□□ 0.03
PTPRK-204ENST00000368210 ZNF526Q8TF50 670 aaPredicted RBP15.22■□□□□ 0.03
PTPRK-204ENST00000368210 UGGT1Q9NYU2 1555 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms