RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 ASAP1Q9ULH1 1129 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
SNHG28-201ENST00000368102 SHANK3Q9BYB0 1731 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
SNHG28-201ENST00000368102 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
SNHG28-201ENST00000368102 ATG9AQ7Z3C6 839 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
SNHG28-201ENST00000368102 PIGBQ92521 554 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 CCDC94Q9BW85 323 aaPredicted RBP16.7■□□□□ 0.26
SNHG28-201ENST00000368102 MED23Q9ULK4 1368 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 UBE2HP62256 183 aa16.69■□□□□ 0.26
SNHG28-201ENST00000368102 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
SNHG28-201ENST00000368102 LRRC2Q9BYS8 371 aa16.69■□□□□ 0.26
SNHG28-201ENST00000368102 AP5Z1O43299 807 aa16.69■□□□□ 0.26
SNHG28-201ENST00000368102 PPFIA3O75145 1194 aa16.69■□□□□ 0.26
SNHG28-201ENST00000368102 GTF2F1P35269 517 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNHG28-201ENST00000368102 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
SNHG28-201ENST00000368102 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
SNHG28-201ENST00000368102 DNAJC10Q8IXB1 793 aa16.68■□□□□ 0.26
SNHG28-201ENST00000368102 NHSL1Q5SYE7 1610 aa16.68■□□□□ 0.26
SNHG28-201ENST00000368102 ADAMTS2O95450 1211 aa16.68■□□□□ 0.26
SNHG28-201ENST00000368102 NEUROD6Q96NK8 337 aa16.68■□□□□ 0.26
SNHG28-201ENST00000368102 HAUS7Q99871 368 aa16.68■□□□□ 0.26
SNHG28-201ENST00000368102 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
SNHG28-201ENST00000368102 CAMK4Q16566 473 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
SNHG28-201ENST00000368102 DDX46Q7L014 1031 aaKnown RBP16.67■□□□□ 0.26
SNHG28-201ENST00000368102 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
SNHG28-201ENST00000368102 TTC12Q9H892 705 aaPredicted RBP16.67■□□□□ 0.26
SNHG28-201ENST00000368102 TFIP11Q9UBB9 837 aaKnown RBP16.67■□□□□ 0.26
SNHG28-201ENST00000368102 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 JAK2O60674 1132 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 TAF5LO75529 589 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
SNHG28-201ENST00000368102 FOSBP53539 338 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 TIMM10P62072 90 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 LRRC24Q50LG9 513 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 RNF20Q5VTR2 975 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 ATG3Q9NT62 314 aa16.67■□□□□ 0.26
SNHG28-201ENST00000368102 NUP188Q5SRE5 1749 aa16.66■□□□□ 0.26
SNHG28-201ENST00000368102 ADCY5O95622 1261 aa16.66■□□□□ 0.26
SNHG28-201ENST00000368102 BLOC1S2Q6QNY1 142 aa16.66■□□□□ 0.26
SNHG28-201ENST00000368102 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
SNHG28-201ENST00000368102 TEX13AQ9BXU3 409 aaPredicted RBP16.66■□□□□ 0.26
SNHG28-201ENST00000368102 TOGARAM1Q9Y4F4 1720 aa16.66■□□□□ 0.26
SNHG28-201ENST00000368102 EYA2O00167 538 aa16.66■□□□□ 0.26
SNHG28-201ENST00000368102 PSMA5P28066 241 aa16.66■□□□□ 0.26
SNHG28-201ENST00000368102 DNTTIP2Q5QJE6 756 aaKnown RBP16.66■□□□□ 0.26
SNHG28-201ENST00000368102 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
SNHG28-201ENST00000368102 LIG1P18858 919 aa16.65■□□□□ 0.26
SNHG28-201ENST00000368102 NOLC1Q14978 699 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNHG28-201ENST00000368102 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
SNHG28-201ENST00000368102 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
SNHG28-201ENST00000368102 JCADQ9P266 1359 aa16.65■□□□□ 0.26
SNHG28-201ENST00000368102 ZNF609O15014 1411 aa16.65■□□□□ 0.26
SNHG28-201ENST00000368102 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
SNHG28-201ENST00000368102 SPTLC3Q9NUV7 552 aa16.65■□□□□ 0.26
SNHG28-201ENST00000368102 STARD3NLO95772 234 aa16.64■□□□□ 0.25
SNHG28-201ENST00000368102 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.25
SNHG28-201ENST00000368102 PUS3Q9BZE2 481 aaKnown RBP16.64■□□□□ 0.25
SNHG28-201ENST00000368102 TJP1Q07157 1748 aa16.64■□□□□ 0.25
SNHG28-201ENST00000368102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.64■□□□□ 0.25
SNHG28-201ENST00000368102 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
SNHG28-201ENST00000368102 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.25
SNHG28-201ENST00000368102 KBTBD3Q8NAB2 608 aa16.64■□□□□ 0.25
SNHG28-201ENST00000368102 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.25
SNHG28-201ENST00000368102 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
SNHG28-201ENST00000368102 USPL1Q5W0Q7 1092 aa16.63■□□□□ 0.25
SNHG28-201ENST00000368102 ARID3AQ99856 593 aa16.63■□□□□ 0.25
SNHG28-201ENST00000368102 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
SNHG28-201ENST00000368102 CKAP2LQ8IYA6 745 aa16.63■□□□□ 0.25
SNHG28-201ENST00000368102 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
SNHG28-201ENST00000368102 GOLIM4O00461 696 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 CIAO1O76071 339 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 TSGA10IPQ3SY00 556 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 MCMDC2Q4G0Z9 681 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 A0A1B0GUL7 405 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 ATP6V1DQ9Y5K8 247 aa16.62■□□□□ 0.25
SNHG28-201ENST00000368102 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
SNHG28-201ENST00000368102 SPC24Q8NBT2 197 aa16.61■□□□□ 0.25
SNHG28-201ENST00000368102 CCDC85AQ96PX6 553 aaPredicted RBP16.61■□□□□ 0.25
SNHG28-201ENST00000368102 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
SNHG28-201ENST00000368102 CYP21A2P08686 494 aa16.61■□□□□ 0.25
SNHG28-201ENST00000368102 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
SNHG28-201ENST00000368102 SLC4A9Q96Q91 983 aa16.61■□□□□ 0.25
SNHG28-201ENST00000368102 MAP3K15Q6ZN16 1313 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 TPM3P06753 285 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 Q6ZUG5 572 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 TSC1Q92574 1164 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 CEP126Q9P2H0 1117 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 EP400Q96L91 3159 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 EXOC5O00471 708 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
SNHG28-201ENST00000368102 DMTNQ08495 405 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 ANKRD1Q15327 319 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms