RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CXCL9Q07325 125 aa30.24■■■□□ 2.43
PFDN2-201ENST00000368010 LMOD1P29536 600 aaPredicted RBP30.23■■■□□ 2.43
PFDN2-201ENST00000368010 EPHX2P34913 555 aa30.23■■■□□ 2.43
PFDN2-201ENST00000368010 CIAPIN1Q6FI81 312 aa30.23■■■□□ 2.43
PFDN2-201ENST00000368010 ANKRD18BA2A2Z9 1011 aa30.22■■■□□ 2.43
PFDN2-201ENST00000368010 GPR101Q96P66 508 aaPredicted RBP30.22■■■□□ 2.43
PFDN2-201ENST00000368010 MPHOSPH8Q99549 860 aa30.22■■■□□ 2.43
PFDN2-201ENST00000368010 ZC3H12CQ9C0D7 883 aaKnown RBP30.22■■■□□ 2.43
PFDN2-201ENST00000368010 MINPP1Q9UNW1 487 aa30.22■■■□□ 2.43
PFDN2-201ENST00000368010 CHMP3Q9Y3E7 222 aa30.22■■■□□ 2.43
PFDN2-201ENST00000368010 ATP2B4P23634 1241 aa30.21■■■□□ 2.43
PFDN2-201ENST00000368010 RARSP54136 660 aaKnown RBP30.21■■■□□ 2.43
PFDN2-201ENST00000368010 BRPF1P55201 1214 aaPredicted RBP30.21■■■□□ 2.43
PFDN2-201ENST00000368010 RAD17O75943 681 aa30.2■■■□□ 2.43
PFDN2-201ENST00000368010 SCNN1DP51172 638 aa30.2■■■□□ 2.43
PFDN2-201ENST00000368010 IFIT5Q13325 482 aaKnown RBP30.2■■■□□ 2.43
PFDN2-201ENST00000368010 TNIP1Q15025 636 aa30.2■■■□□ 2.43
PFDN2-201ENST00000368010 EPHA10Q5JZY3 1008 aa30.2■■■□□ 2.43
PFDN2-201ENST00000368010 LMBR1LQ6UX01 489 aa30.2■■■□□ 2.43
PFDN2-201ENST00000368010 DBNDD1Q9H9R9 158 aa30.2■■■□□ 2.43
PFDN2-201ENST00000368010 UTYO14607 1347 aa30.2■■■□□ 2.42
PFDN2-201ENST00000368010 SPEF2Q9C093 1822 aa30.19■■■□□ 2.42
PFDN2-201ENST00000368010 YDJCA8MPS7 323 aa30.19■■■□□ 2.42
PFDN2-201ENST00000368010 NBPF7P0C2Y1 421 aaPredicted RBP30.19■■■□□ 2.42
PFDN2-201ENST00000368010 POTEIP0CG38 1075 aa30.19■■■□□ 2.42
PFDN2-201ENST00000368010 POTEJP0CG39 1038 aa30.19■■■□□ 2.42
PFDN2-201ENST00000368010 EAPPQ56P03 285 aaPredicted RBP30.19■■■□□ 2.42
PFDN2-201ENST00000368010 CHADLQ6NUI6 762 aa30.19■■■□□ 2.42
PFDN2-201ENST00000368010 LDHDQ86WU2 507 aa30.19■■■□□ 2.42
PFDN2-201ENST00000368010 NOB1Q9ULX3 412 aaKnown RBP30.19■■■□□ 2.42
PFDN2-201ENST00000368010 APLP1P51693 650 aa30.18■■■□□ 2.42
PFDN2-201ENST00000368010 PNMA8AQ86V59 439 aaPredicted RBP30.18■■■□□ 2.42
PFDN2-201ENST00000368010 SUCLG2Q96I99 432 aa30.18■■■□□ 2.42
PFDN2-201ENST00000368010 G3V3G9 751 aa30.17■■■□□ 2.42
PFDN2-201ENST00000368010 ECE2O60344 883 aa30.17■■■□□ 2.42
PFDN2-201ENST00000368010 DOK7Q18PE1 504 aa30.17■■■□□ 2.42
PFDN2-201ENST00000368010 DCAF8Q5TAQ9 597 aa30.17■■■□□ 2.42
PFDN2-201ENST00000368010 API5Q9BZZ5 524 aaKnown RBP30.17■■■□□ 2.42
PFDN2-201ENST00000368010 KIF16BQ96L93 1317 aa30.17■■■□□ 2.42
PFDN2-201ENST00000368010 CCDC57Q2TAC2 916 aa30.16■■■□□ 2.42
PFDN2-201ENST00000368010 ANKRD2Q9GZV1 360 aa30.16■■■□□ 2.42
PFDN2-201ENST00000368010 ZBED9Q6R2W3 1325 aa30.16■■■□□ 2.42
PFDN2-201ENST00000368010 GMPSP49915 693 aaPredicted RBP30.15■■■□□ 2.42
PFDN2-201ENST00000368010 CCT4P50991 539 aaKnown RBP30.15■■■□□ 2.42
PFDN2-201ENST00000368010 EPS15P42566 896 aa30.14■■■□□ 2.42
PFDN2-201ENST00000368010 TAF7LQ5H9L4 462 aa30.14■■■□□ 2.42
PFDN2-201ENST00000368010 KAZALD1Q96I82 304 aa30.14■■■□□ 2.42
PFDN2-201ENST00000368010 GPRC5DQ9NZD1 345 aa30.14■■■□□ 2.42
PFDN2-201ENST00000368010 CLEC11AQ9Y240 323 aa30.13■■■□□ 2.41
PFDN2-201ENST00000368010 LEMD3Q9Y2U8 911 aa30.13■■■□□ 2.41
PFDN2-201ENST00000368010 MED23Q9ULK4 1368 aa30.13■■■□□ 2.41
PFDN2-201ENST00000368010 USP44Q9H0E7 712 aa30.12■■■□□ 2.41
PFDN2-201ENST00000368010 PSMD14O00487 310 aa30.11■■■□□ 2.41
PFDN2-201ENST00000368010 CHRNDQ07001 517 aa30.11■■■□□ 2.41
PFDN2-201ENST00000368010 BICC1Q9H694 974 aaKnown RBP30.11■■■□□ 2.41
PFDN2-201ENST00000368010 ARHGAP45Q92619 1136 aa30.1■■■□□ 2.41
PFDN2-201ENST00000368010 ADARB2Q9NS39 739 aaKnown RBP30.1■■■□□ 2.41
PFDN2-201ENST00000368010 ADAMTSL1Q8N6G6 1762 aa30.1■■■□□ 2.41
PFDN2-201ENST00000368010 ZNF804BA4D1E1 1349 aa30.09■■■□□ 2.41
PFDN2-201ENST00000368010 WTIPA6NIX2 430 aaPredicted RBP30.09■■■□□ 2.41
PFDN2-201ENST00000368010 RABL6Q3YEC7 729 aaPredicted RBP30.09■■■□□ 2.41
PFDN2-201ENST00000368010 USP50Q70EL3 339 aaPredicted RBP30.09■■■□□ 2.41
PFDN2-201ENST00000368010 ZNF594Q96JF6 807 aaPredicted RBP30.09■■■□□ 2.41
PFDN2-201ENST00000368010 KCNJ4P48050 445 aa30.08■■■□□ 2.41
PFDN2-201ENST00000368010 LDHAL6AQ6ZMR3 332 aa30.08■■■□□ 2.41
PFDN2-201ENST00000368010 KCNQ5Q9NR82 932 aa30.08■■■□□ 2.41
PFDN2-201ENST00000368010 ZBTB12Q9Y330 459 aaPredicted RBP30.08■■■□□ 2.41
PFDN2-201ENST00000368010 IPO8O15397 1037 aaKnown RBP30.07■■■□□ 2.4
PFDN2-201ENST00000368010 CNNM1Q9NRU3 951 aa30.07■■■□□ 2.4
PFDN2-201ENST00000368010 RPS12P25398 132 aaKnown RBP30.06■■■□□ 2.4
PFDN2-201ENST00000368010 PODNQ7Z5L7 613 aa30.06■■■□□ 2.4
PFDN2-201ENST00000368010 ANKRD44Q8N8A2 993 aa30.06■■■□□ 2.4
PFDN2-201ENST00000368010 DPF2Q92785 391 aa30.06■■■□□ 2.4
PFDN2-201ENST00000368010 BCAR3O75815 825 aa30.05■■■□□ 2.4
PFDN2-201ENST00000368010 CNOT7Q9UIV1 285 aaKnown RBP30.05■■■□□ 2.4
PFDN2-201ENST00000368010 H7C1D1 291 aa30.04■■■□□ 2.4
PFDN2-201ENST00000368010 MAP1SQ66K74 1059 aaPredicted RBP30.04■■■□□ 2.4
PFDN2-201ENST00000368010 TAF5LO75529 589 aa30.03■■■□□ 2.4
PFDN2-201ENST00000368010 VIL1P09327 827 aaKnown RBP30.03■■■□□ 2.4
PFDN2-201ENST00000368010 UBTFL1P0CB47 393 aaPredicted RBP30.03■■■□□ 2.4
PFDN2-201ENST00000368010 HTRA3P83110 453 aa30.03■■■□□ 2.4
PFDN2-201ENST00000368010 MICALL2Q8IY33 904 aa30.03■■■□□ 2.4
PFDN2-201ENST00000368010 HELBQ8NG08 1087 aaPredicted RBP30.03■■■□□ 2.4
PFDN2-201ENST00000368010 FRAT1Q92837 279 aaPredicted RBP30.03■■■□□ 2.4
PFDN2-201ENST00000368010 COA1Q9GZY4 146 aa30.03■■■□□ 2.4
PFDN2-201ENST00000368010 SCN9AQ15858 1988 aa30.03■■■□□ 2.4
PFDN2-201ENST00000368010 TXNRD3Q86VQ6 643 aa30.02■■■□□ 2.4
PFDN2-201ENST00000368010 CNTROBQ8N137 903 aa30.02■■■□□ 2.4
PFDN2-201ENST00000368010 KLRK1P26718 216 aa30.01■■■□□ 2.39
PFDN2-201ENST00000368010 ATF7IPQ6VMQ6 1270 aa30.01■■■□□ 2.39
PFDN2-201ENST00000368010 PASKQ96RG2 1323 aa30■■■□□ 2.39
PFDN2-201ENST00000368010 SHTN1A0MZ66 631 aa30■■■□□ 2.39
PFDN2-201ENST00000368010 USP17L3A6NCW0 530 aa30■■■□□ 2.39
PFDN2-201ENST00000368010 USP17L4A6NCW7 530 aa30■■■□□ 2.39
PFDN2-201ENST00000368010 ITGBL1O95965 494 aaPredicted RBP30■■■□□ 2.39
PFDN2-201ENST00000368010 TRIM27P14373 513 aa30■■■□□ 2.39
PFDN2-201ENST00000368010 INTS3Q68E01 1043 aaKnown RBP30■■■□□ 2.39
PFDN2-201ENST00000368010 RSBN1LQ6PCB5 846 aaPredicted RBP30■■■□□ 2.39
PFDN2-201ENST00000368010 USP17L1Q7RTZ2 530 aa30■■■□□ 2.39
PFDN2-201ENST00000368010 HDAC5Q9UQL6 1122 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms