RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 UTYO14607 1347 aa12.42□□□□□ -0.42
NUP43-202ENST00000367402 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
NUP43-202ENST00000367402 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
NUP43-202ENST00000367402 FOXO4P98177 505 aa12.42□□□□□ -0.42
NUP43-202ENST00000367402 EPHA10Q5JZY3 1008 aa12.42□□□□□ -0.42
NUP43-202ENST00000367402 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
NUP43-202ENST00000367402 RTKN2Q8IZC4 609 aa12.42□□□□□ -0.42
NUP43-202ENST00000367402 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
NUP43-202ENST00000367402 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
NUP43-202ENST00000367402 PLIN1O60240 522 aa12.41□□□□□ -0.42
NUP43-202ENST00000367402 CSF1RP07333 972 aa12.41□□□□□ -0.42
NUP43-202ENST00000367402 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
NUP43-202ENST00000367402 RASSF7Q02833 373 aa12.41□□□□□ -0.42
NUP43-202ENST00000367402 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
NUP43-202ENST00000367402 ANKRD18AQ8IVF6 992 aa12.41□□□□□ -0.42
NUP43-202ENST00000367402 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
NUP43-202ENST00000367402 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
NUP43-202ENST00000367402 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
NUP43-202ENST00000367402 ANKRD18BA2A2Z9 1011 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 MS4A1P11836 297 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 ITGA6P23229 1130 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 IER5LQ5T953 404 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 TMC4Q7Z404 712 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 TAOK3Q9H2K8 898 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.42
NUP43-202ENST00000367402 UTRNP46939 3433 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 NFKBIEO00221 500 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 IGHMBP2P38935 993 aaKnown RBP12.39□□□□□ -0.43
NUP43-202ENST00000367402 IFIT5Q13325 482 aaKnown RBP12.39□□□□□ -0.43
NUP43-202ENST00000367402 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.39□□□□□ -0.43
NUP43-202ENST00000367402 PANK1Q8TE04 598 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 KAZALD1Q96I82 304 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 MEIS3Q99687 375 aa12.39□□□□□ -0.43
NUP43-202ENST00000367402 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
NUP43-202ENST00000367402 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
NUP43-202ENST00000367402 GNAI3P08754 354 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 RLBP1P12271 317 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 LMNB1P20700 586 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 YY1P25490 414 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 FKBP4Q02790 459 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUP43-202ENST00000367402 TAF7LQ5H9L4 462 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 DPP8Q6V1X1 898 aaPredicted RBP12.38□□□□□ -0.43
NUP43-202ENST00000367402 MPNDQ8N594 471 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 RNF181Q9P0P0 153 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
NUP43-202ENST00000367402 SLX4Q8IY92 1834 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
NUP43-202ENST00000367402 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
NUP43-202ENST00000367402 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
NUP43-202ENST00000367402 ZNF277Q9NRM2 450 aaPredicted RBP12.37□□□□□ -0.43
NUP43-202ENST00000367402 BSDC1Q9NW68 430 aaPredicted RBP12.37□□□□□ -0.43
NUP43-202ENST00000367402 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
NUP43-202ENST00000367402 LRRFIP2Q9Y608 721 aaKnown RBP12.37□□□□□ -0.43
NUP43-202ENST00000367402 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
NUP43-202ENST00000367402 PRELPP51888 382 aa12.36□□□□□ -0.43
NUP43-202ENST00000367402 GPSM2P81274 684 aa12.36□□□□□ -0.43
NUP43-202ENST00000367402 RABL6Q3YEC7 729 aaPredicted RBP12.36□□□□□ -0.43
NUP43-202ENST00000367402 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
NUP43-202ENST00000367402 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
NUP43-202ENST00000367402 PSMD1Q99460 953 aa12.36□□□□□ -0.43
NUP43-202ENST00000367402 COLQQ9Y215 455 aaPredicted RBP12.36□□□□□ -0.43
NUP43-202ENST00000367402 LAMB2P55268 1798 aa12.35□□□□□ -0.43
NUP43-202ENST00000367402 C6orf229H3BNL8 230 aa12.35□□□□□ -0.43
NUP43-202ENST00000367402 GNAI2P04899 355 aa12.35□□□□□ -0.43
NUP43-202ENST00000367402 NUBP1P53384 320 aa12.35□□□□□ -0.43
NUP43-202ENST00000367402 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
NUP43-202ENST00000367402 MINPP1Q9UNW1 487 aa12.35□□□□□ -0.43
NUP43-202ENST00000367402 COG6Q9Y2V7 657 aa12.35□□□□□ -0.43
NUP43-202ENST00000367402 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
NUP43-202ENST00000367402 ZBTB7BO15156 539 aaPredicted RBP12.34□□□□□ -0.43
NUP43-202ENST00000367402 IARSP41252 1262 aaKnown RBP12.34□□□□□ -0.43
NUP43-202ENST00000367402 PDE3AQ14432 1141 aa12.34□□□□□ -0.43
NUP43-202ENST00000367402 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
NUP43-202ENST00000367402 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
NUP43-202ENST00000367402 C20orf194Q5TEA3 1177 aa12.34□□□□□ -0.43
NUP43-202ENST00000367402 RTFDC1Q9BY42 306 aaPredicted RBP12.34□□□□□ -0.43
NUP43-202ENST00000367402 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
NUP43-202ENST00000367402 COL4A1P02462 1669 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 AOC3Q16853 763 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 WASHC4Q2M389 1173 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 TBC1D16Q8TBP0 767 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 JDP2Q8WYK2 163 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 PODXL2Q9NZ53 605 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 GGA1Q9UJY5 639 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 XDHP47989 1333 aa12.33□□□□□ -0.44
NUP43-202ENST00000367402 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms