RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 ITGBL1O95965 494 aaPredicted RBP21.48■■□□□ 1.03
PRKN-202ENST00000366892 NEFLP07196 543 aa21.48■■□□□ 1.03
PRKN-202ENST00000366892 TNIP1Q15025 636 aa21.48■■□□□ 1.03
PRKN-202ENST00000366892 DBNDD1Q9H9R9 158 aa21.48■■□□□ 1.03
PRKN-202ENST00000366892 GPRC5DQ9NZD1 345 aa21.48■■□□□ 1.03
PRKN-202ENST00000366892 RTL9Q8NET4 1388 aa21.47■■□□□ 1.03
PRKN-202ENST00000366892 GMPSP49915 693 aaPredicted RBP21.47■■□□□ 1.03
PRKN-202ENST00000366892 CDCA7LQ96GN5 454 aa21.47■■□□□ 1.03
PRKN-202ENST00000366892 ZC3H12CQ9C0D7 883 aaKnown RBP21.47■■□□□ 1.03
PRKN-202ENST00000366892 GGA1Q9UJY5 639 aa21.47■■□□□ 1.03
PRKN-202ENST00000366892 SUPT16HQ9Y5B9 1047 aaKnown RBP21.47■■□□□ 1.03
PRKN-202ENST00000366892 PASKQ96RG2 1323 aa21.46■■□□□ 1.03
PRKN-202ENST00000366892 UFL1O94874 794 aa21.46■■□□□ 1.03
PRKN-202ENST00000366892 CSF1RP07333 972 aa21.46■■□□□ 1.03
PRKN-202ENST00000366892 LTBP1Q14766 1721 aa21.46■■□□□ 1.03
PRKN-202ENST00000366892 DOK7Q18PE1 504 aa21.46■■□□□ 1.03
PRKN-202ENST00000366892 MAP1SQ66K74 1059 aaPredicted RBP21.46■■□□□ 1.03
PRKN-202ENST00000366892 USP50Q70EL3 339 aaPredicted RBP21.46■■□□□ 1.03
PRKN-202ENST00000366892 CNTROBQ8N137 903 aa21.46■■□□□ 1.03
PRKN-202ENST00000366892 BSDC1Q9NW68 430 aaPredicted RBP21.46■■□□□ 1.03
PRKN-202ENST00000366892 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
PRKN-202ENST00000366892 MINPP1Q9UNW1 487 aa21.45■■□□□ 1.02
PRKN-202ENST00000366892 XDHP47989 1333 aa21.45■■□□□ 1.02
PRKN-202ENST00000366892 MRPL50Q8N5N7 158 aaKnown RBP21.45■■□□□ 1.02
PRKN-202ENST00000366892 KCNQ5Q9NR82 932 aa21.45■■□□□ 1.02
PRKN-202ENST00000366892 ADARB2Q9NS39 739 aaKnown RBP21.45■■□□□ 1.02
PRKN-202ENST00000366892 ECE2O60344 883 aa21.44■■□□□ 1.02
PRKN-202ENST00000366892 ITGA6P23229 1130 aa21.44■■□□□ 1.02
PRKN-202ENST00000366892 SLC4A10Q6U841 1118 aa21.44■■□□□ 1.02
PRKN-202ENST00000366892 CREBZFQ9NS37 354 aa21.44■■□□□ 1.02
PRKN-202ENST00000366892 ADAMTSL1Q8N6G6 1762 aa21.43■■□□□ 1.02
PRKN-202ENST00000366892 WTIPA6NIX2 430 aaPredicted RBP21.43■■□□□ 1.02
PRKN-202ENST00000366892 PSMD14O00487 310 aa21.43■■□□□ 1.02
PRKN-202ENST00000366892 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
PRKN-202ENST00000366892 TRMT2AQ8IZ69 625 aaKnown RBP21.43■■□□□ 1.02
PRKN-202ENST00000366892 ZBTB12Q9Y330 459 aaPredicted RBP21.43■■□□□ 1.02
PRKN-202ENST00000366892 ATP2B4P23634 1241 aa21.42■■□□□ 1.02
PRKN-202ENST00000366892 IGHMBP2P38935 993 aaKnown RBP21.42■■□□□ 1.02
PRKN-202ENST00000366892 FOXO4P98177 505 aa21.42■■□□□ 1.02
PRKN-202ENST00000366892 SSH1Q8WYL5 1049 aa21.42■■□□□ 1.02
PRKN-202ENST00000366892 CNOT7Q9UIV1 285 aaKnown RBP21.42■■□□□ 1.02
PRKN-202ENST00000366892 GRM8O00222 908 aa21.41■■□□□ 1.02
PRKN-202ENST00000366892 ALDH1L1O75891 902 aa21.41■■□□□ 1.02
PRKN-202ENST00000366892 JMYQ8N9B5 988 aa21.41■■□□□ 1.02
PRKN-202ENST00000366892 SRCIN1Q9C0H9 1055 aa21.41■■□□□ 1.02
PRKN-202ENST00000366892 DPF2Q92785 391 aa21.4■■□□□ 1.02
PRKN-202ENST00000366892 C9orf78Q9NZ63 289 aaPredicted RBP21.4■■□□□ 1.02
PRKN-202ENST00000366892 MYH3P11055 1940 aa21.4■■□□□ 1.02
PRKN-202ENST00000366892 SHTN1A0MZ66 631 aa21.39■■□□□ 1.02
PRKN-202ENST00000366892 G3V3G9 751 aa21.39■■□□□ 1.02
PRKN-202ENST00000366892 DCAF8Q5TAQ9 597 aa21.39■■□□□ 1.02
PRKN-202ENST00000366892 MPHOSPH8Q99549 860 aa21.39■■□□□ 1.02
PRKN-202ENST00000366892 TMEM88BA6NKF7 163 aa21.39■■□□□ 1.01
PRKN-202ENST00000366892 H7C1D1 291 aa21.39■■□□□ 1.01
PRKN-202ENST00000366892 CCT4P50991 539 aaKnown RBP21.39■■□□□ 1.01
PRKN-202ENST00000366892 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
PRKN-202ENST00000366892 EPHA10Q5JZY3 1008 aa21.39■■□□□ 1.01
PRKN-202ENST00000366892 ANKRD18BA2A2Z9 1011 aa21.38■■□□□ 1.01
PRKN-202ENST00000366892 MICALL2Q8IY33 904 aa21.38■■□□□ 1.01
PRKN-202ENST00000366892 PTPRCP08575 1304 aa21.38■■□□□ 1.01
PRKN-202ENST00000366892 VIL1P09327 827 aaKnown RBP21.37■■□□□ 1.01
PRKN-202ENST00000366892 RPS12P25398 132 aaKnown RBP21.37■■□□□ 1.01
PRKN-202ENST00000366892 IFIT5Q13325 482 aaKnown RBP21.37■■□□□ 1.01
PRKN-202ENST00000366892 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
PRKN-202ENST00000366892 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
PRKN-202ENST00000366892 LMBR1LQ6UX01 489 aa21.37■■□□□ 1.01
PRKN-202ENST00000366892 PGAP2Q9UHJ9 254 aa21.37■■□□□ 1.01
PRKN-202ENST00000366892 CHMP3Q9Y3E7 222 aa21.37■■□□□ 1.01
PRKN-202ENST00000366892 PODNQ7Z5L7 613 aa21.36■■□□□ 1.01
PRKN-202ENST00000366892 TRPM4Q8TD43 1214 aa21.36■■□□□ 1.01
PRKN-202ENST00000366892 ANKRD2Q9GZV1 360 aa21.36■■□□□ 1.01
PRKN-202ENST00000366892 MKRN1Q9UHC7 482 aaKnown RBP21.36■■□□□ 1.01
PRKN-202ENST00000366892 LEMD3Q9Y2U8 911 aa21.36■■□□□ 1.01
PRKN-202ENST00000366892 FMR1Q06787 632 aaKnown RBP eCLIP21.35■■□□□ 1.01
PRKN-202ENST00000366892 ZC3H15Q8WU90 426 aaKnown RBP21.35■■□□□ 1.01
PRKN-202ENST00000366892 NBPF7P0C2Y1 421 aaPredicted RBP21.34■■□□□ 1.01
PRKN-202ENST00000366892 CHRNDQ07001 517 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 SAMD7Q7Z3H4 446 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 MED23Q9ULK4 1368 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 TRAF5O00463 557 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 CT47B1P0C2W7 299 aaPredicted RBP21.34■■□□□ 1.01
PRKN-202ENST00000366892 TXNRD3Q86VQ6 643 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 KAZALD1Q96I82 304 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 ZNF804BA4D1E1 1349 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 UTYO14607 1347 aa21.34■■□□□ 1.01
PRKN-202ENST00000366892 CCDC57Q2TAC2 916 aa21.33■■□□□ 1
PRKN-202ENST00000366892 SUCLG2Q96I99 432 aa21.33■■□□□ 1
PRKN-202ENST00000366892 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1
PRKN-202ENST00000366892 SCN9AQ15858 1988 aa21.33■■□□□ 1
PRKN-202ENST00000366892 EGFRP00533 1210 aa21.32■■□□□ 1
PRKN-202ENST00000366892 TBC1D10BQ4KMP7 808 aaPredicted RBP21.32■■□□□ 1
PRKN-202ENST00000366892 RSBN1LQ6PCB5 846 aaPredicted RBP21.32■■□□□ 1
PRKN-202ENST00000366892 ZNF594Q96JF6 807 aaPredicted RBP21.32■■□□□ 1
PRKN-202ENST00000366892 USP17L3A6NCW0 530 aa21.31■■□□□ 1
PRKN-202ENST00000366892 USP17L4A6NCW7 530 aa21.31■■□□□ 1
PRKN-202ENST00000366892 RBM26Q5T8P6 1007 aaKnown RBP21.31■■□□□ 1
PRKN-202ENST00000366892 USP17L1Q7RTZ2 530 aa21.31■■□□□ 1
PRKN-202ENST00000366892 AGBL3Q8NEM8 1001 aa21.31■■□□□ 1
PRKN-202ENST00000366892 GLIS2Q9BZE0 524 aaPredicted RBP21.31■■□□□ 1
PRKN-202ENST00000366892 CNTNAP1P78357 1384 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms