RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 ARHGAP45Q92619 1136 aa25.08■■□□□ 1.61
H3F3A-204ENST00000366816 PODXL2Q9NZ53 605 aa25.08■■□□□ 1.61
H3F3A-204ENST00000366816 UFL1O94874 794 aa25.07■■□□□ 1.6
H3F3A-204ENST00000366816 ZNF594Q96JF6 807 aaPredicted RBP25.07■■□□□ 1.6
H3F3A-204ENST00000366816 BICC1Q9H694 974 aaKnown RBP25.07■■□□□ 1.6
H3F3A-204ENST00000366816 SPEF2Q9C093 1822 aa25.07■■□□□ 1.6
H3F3A-204ENST00000366816 IPO8O15397 1037 aaKnown RBP25.06■■□□□ 1.6
H3F3A-204ENST00000366816 TRIM27P14373 513 aa25.06■■□□□ 1.6
H3F3A-204ENST00000366816 VEGFAP15692 232 aaPredicted RBP25.06■■□□□ 1.6
H3F3A-204ENST00000366816 EIF6P56537 245 aaKnown RBP25.06■■□□□ 1.6
H3F3A-204ENST00000366816 MPHOSPH8Q99549 860 aa25.06■■□□□ 1.6
H3F3A-204ENST00000366816 GGA1Q9UJY5 639 aa25.06■■□□□ 1.6
H3F3A-204ENST00000366816 GJA3Q9Y6H8 435 aa25.06■■□□□ 1.6
H3F3A-204ENST00000366816 CCDC57Q2TAC2 916 aa25.05■■□□□ 1.6
H3F3A-204ENST00000366816 CLUAP1Q96AJ1 413 aa25.05■■□□□ 1.6
H3F3A-204ENST00000366816 ZNRF3Q9ULT6 936 aa25.05■■□□□ 1.6
H3F3A-204ENST00000366816 LTBP1Q14766 1721 aa25.05■■□□□ 1.6
H3F3A-204ENST00000366816 XDHP47989 1333 aa25.05■■□□□ 1.6
H3F3A-204ENST00000366816 DOK7Q18PE1 504 aa25.04■■□□□ 1.6
H3F3A-204ENST00000366816 ATF7IPQ6VMQ6 1270 aa25.04■■□□□ 1.6
H3F3A-204ENST00000366816 ANKRD44Q8N8A2 993 aa25.04■■□□□ 1.6
H3F3A-204ENST00000366816 C16orf71Q8IYS4 520 aaPredicted RBP25.03■■□□□ 1.6
H3F3A-204ENST00000366816 EYA3Q99504 573 aa25.03■■□□□ 1.6
H3F3A-204ENST00000366816 DBNDD1Q9H9R9 158 aa25.03■■□□□ 1.6
H3F3A-204ENST00000366816 YDJCA8MPS7 323 aa25.02■■□□□ 1.6
H3F3A-204ENST00000366816 CXCL9Q07325 125 aa25.02■■□□□ 1.6
H3F3A-204ENST00000366816 TAF7LQ5H9L4 462 aa25.02■■□□□ 1.6
H3F3A-204ENST00000366816 INTS3Q68E01 1043 aaKnown RBP25.02■■□□□ 1.6
H3F3A-204ENST00000366816 GPC2Q8N158 579 aa25.02■■□□□ 1.6
H3F3A-204ENST00000366816 ZC3H12CQ9C0D7 883 aaKnown RBP25.02■■□□□ 1.6
H3F3A-204ENST00000366816 WDR90Q96KV7 1748 aa25.01■■□□□ 1.59
H3F3A-204ENST00000366816 RAD17O75943 681 aa25.01■■□□□ 1.59
H3F3A-204ENST00000366816 TOMM70O94826 608 aa25.01■■□□□ 1.59
H3F3A-204ENST00000366816 ATP2B4P23634 1241 aa25.01■■□□□ 1.59
H3F3A-204ENST00000366816 RABL6Q3YEC7 729 aaPredicted RBP25.01■■□□□ 1.59
H3F3A-204ENST00000366816 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
H3F3A-204ENST00000366816 HELBQ8NG08 1087 aaPredicted RBP25.01■■□□□ 1.59
H3F3A-204ENST00000366816 UBTFL1P0CB47 393 aaPredicted RBP25■■□□□ 1.59
H3F3A-204ENST00000366816 CHRNDQ07001 517 aa25■■□□□ 1.59
H3F3A-204ENST00000366816 L3MBTL3Q96JM7 780 aaPredicted RBP25■■□□□ 1.59
H3F3A-204ENST00000366816 MEIS3Q99687 375 aa25■■□□□ 1.59
H3F3A-204ENST00000366816 KCNQ5Q9NR82 932 aa25■■□□□ 1.59
H3F3A-204ENST00000366816 TAF5LO75529 589 aa24.99■■□□□ 1.59
H3F3A-204ENST00000366816 LDHAL6AQ6ZMR3 332 aa24.99■■□□□ 1.59
H3F3A-204ENST00000366816 SNAP23O00161 211 aa24.98■■□□□ 1.59
H3F3A-204ENST00000366816 ECE2O60344 883 aa24.98■■□□□ 1.59
H3F3A-204ENST00000366816 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
H3F3A-204ENST00000366816 PUS3Q9BZE2 481 aaKnown RBP24.98■■□□□ 1.59
H3F3A-204ENST00000366816 ANKRD2Q9GZV1 360 aa24.98■■□□□ 1.59
H3F3A-204ENST00000366816 CNNM1Q9NRU3 951 aa24.98■■□□□ 1.59
H3F3A-204ENST00000366816 CIAPIN1Q6FI81 312 aa24.97■■□□□ 1.59
H3F3A-204ENST00000366816 KLHDC4Q8TBB5 520 aa24.97■■□□□ 1.59
H3F3A-204ENST00000366816 G3V3G9 751 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 PLIN1O60240 522 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 POTEIP0CG38 1075 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 POTEJP0CG39 1038 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 KLRK1P26718 216 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 DCAF8Q5TAQ9 597 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 TXNRD3Q86VQ6 643 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 TMEM57Q8N5G2 664 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 HACL1Q9UJ83 578 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 LEMD3Q9Y2U8 911 aa24.96■■□□□ 1.59
H3F3A-204ENST00000366816 LRRFIP2Q9Y608 721 aaKnown RBP24.96■■□□□ 1.59
H3F3A-204ENST00000366816 ZNF804BA4D1E1 1349 aa24.95■■□□□ 1.58
H3F3A-204ENST00000366816 IQCA1LA6NCM1 817 aa24.95■■□□□ 1.58
H3F3A-204ENST00000366816 RBM46Q8TBY0 533 aaKnown RBP24.95■■□□□ 1.58
H3F3A-204ENST00000366816 TAF1DQ9H5J8 278 aaPredicted RBP24.95■■□□□ 1.58
H3F3A-204ENST00000366816 EPS15P42566 896 aa24.94■■□□□ 1.58
H3F3A-204ENST00000366816 SCNN1DP51172 638 aa24.94■■□□□ 1.58
H3F3A-204ENST00000366816 PSMD14O00487 310 aa24.93■■□□□ 1.58
H3F3A-204ENST00000366816 RLBP1P12271 317 aa24.93■■□□□ 1.58
H3F3A-204ENST00000366816 EPHX2P34913 555 aa24.93■■□□□ 1.58
H3F3A-204ENST00000366816 KCNJ4P48050 445 aa24.93■■□□□ 1.58
H3F3A-204ENST00000366816 GMPSP49915 693 aaPredicted RBP24.93■■□□□ 1.58
H3F3A-204ENST00000366816 TNIP1Q15025 636 aa24.93■■□□□ 1.58
H3F3A-204ENST00000366816 LRRC24Q50LG9 513 aa24.93■■□□□ 1.58
H3F3A-204ENST00000366816 EAPPQ56P03 285 aaPredicted RBP24.92■■□□□ 1.58
H3F3A-204ENST00000366816 ZBTB12Q9Y330 459 aaPredicted RBP24.92■■□□□ 1.58
H3F3A-204ENST00000366816 MED23Q9ULK4 1368 aa24.92■■□□□ 1.58
H3F3A-204ENST00000366816 LMOD1P29536 600 aaPredicted RBP24.91■■□□□ 1.58
H3F3A-204ENST00000366816 RFX5P48382 616 aaPredicted RBP24.91■■□□□ 1.58
H3F3A-204ENST00000366816 FTSJ3Q8IY81 847 aaKnown RBP24.91■■□□□ 1.58
H3F3A-204ENST00000366816 DZIP1LQ8IYY4 767 aaKnown RBP24.91■■□□□ 1.58
H3F3A-204ENST00000366816 RCAN3Q9UKA8 241 aa24.91■■□□□ 1.58
H3F3A-204ENST00000366816 RIPOR2Q9Y4F9 1068 aa24.91■■□□□ 1.58
H3F3A-204ENST00000366816 GNAI3P08754 354 aa24.9■■□□□ 1.58
H3F3A-204ENST00000366816 GPRC5DQ9NZD1 345 aa24.9■■□□□ 1.58
H3F3A-204ENST00000366816 SCN4AP35499 1836 aa24.9■■□□□ 1.58
H3F3A-204ENST00000366816 SHTN1A0MZ66 631 aa24.89■■□□□ 1.58
H3F3A-204ENST00000366816 SMC1BQ8NDV3 1235 aa24.89■■□□□ 1.58
H3F3A-204ENST00000366816 PANK1Q8TE04 598 aa24.88■■□□□ 1.57
H3F3A-204ENST00000366816 HDAC5Q9UQL6 1122 aa24.88■■□□□ 1.57
H3F3A-204ENST00000366816 SCN9AQ15858 1988 aa24.87■■□□□ 1.57
H3F3A-204ENST00000366816 PTPN12Q05209 780 aaKnown RBP24.87■■□□□ 1.57
H3F3A-204ENST00000366816 FSTL1Q12841 308 aa24.87■■□□□ 1.57
H3F3A-204ENST00000366816 ITPRIPQ8IWB1 547 aa24.87■■□□□ 1.57
H3F3A-204ENST00000366816 CLEC11AQ9Y240 323 aa24.87■■□□□ 1.57
H3F3A-204ENST00000366816 IRS2Q9Y4H2 1338 aa24.86■■□□□ 1.57
H3F3A-204ENST00000366816 PODNQ7Z5L7 613 aa24.86■■□□□ 1.57
H3F3A-204ENST00000366816 COA1Q9GZY4 146 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms