RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 RAD17O75943 681 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 TRMT2AQ8IZ69 625 aaKnown RBP13.16□□□□□ -0.3
YBX3-203ENST00000366286 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 EYA3Q99504 573 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
YBX3-203ENST00000366286 XDHP47989 1333 aa13.15□□□□□ -0.3
YBX3-203ENST00000366286 ECE2O60344 883 aa13.15□□□□□ -0.3
YBX3-203ENST00000366286 ITGA6P23229 1130 aa13.15□□□□□ -0.3
YBX3-203ENST00000366286 EPS15P42566 896 aa13.15□□□□□ -0.3
YBX3-203ENST00000366286 PNMA8AQ86V59 439 aaPredicted RBP13.15□□□□□ -0.3
YBX3-203ENST00000366286 PTPRCP08575 1304 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 GRM8O00222 908 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 ALDH1L1O75891 902 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 CSF1RP07333 972 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 GMPSP49915 693 aaPredicted RBP13.14□□□□□ -0.31
YBX3-203ENST00000366286 FOXO4P98177 505 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 SRCIN1Q9C0H9 1055 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
YBX3-203ENST00000366286 GPRC5DQ9NZD1 345 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
YBX3-203ENST00000366286 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
YBX3-203ENST00000366286 TNIP1Q15025 636 aa13.13□□□□□ -0.31
YBX3-203ENST00000366286 ALDH1L2Q3SY69 923 aa13.13□□□□□ -0.31
YBX3-203ENST00000366286 DNAJC5GQ8N7S2 189 aa13.13□□□□□ -0.31
YBX3-203ENST00000366286 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
YBX3-203ENST00000366286 SMC4Q9NTJ3 1288 aa13.13□□□□□ -0.31
YBX3-203ENST00000366286 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
YBX3-203ENST00000366286 PASKQ96RG2 1323 aa13.13□□□□□ -0.31
YBX3-203ENST00000366286 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
YBX3-203ENST00000366286 MED23Q9ULK4 1368 aa13.12□□□□□ -0.31
YBX3-203ENST00000366286 PSMD14O00487 310 aa13.12□□□□□ -0.31
YBX3-203ENST00000366286 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
YBX3-203ENST00000366286 EPHA10Q5JZY3 1008 aa13.12□□□□□ -0.31
YBX3-203ENST00000366286 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
YBX3-203ENST00000366286 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
YBX3-203ENST00000366286 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
YBX3-203ENST00000366286 CHMP3Q9Y3E7 222 aa13.12□□□□□ -0.31
YBX3-203ENST00000366286 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
YBX3-203ENST00000366286 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
YBX3-203ENST00000366286 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
YBX3-203ENST00000366286 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
YBX3-203ENST00000366286 LMBR1LQ6UX01 489 aa13.11□□□□□ -0.31
YBX3-203ENST00000366286 USP50Q70EL3 339 aaPredicted RBP13.11□□□□□ -0.31
YBX3-203ENST00000366286 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
YBX3-203ENST00000366286 MPHOSPH8Q99549 860 aa13.11□□□□□ -0.31
YBX3-203ENST00000366286 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
YBX3-203ENST00000366286 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
YBX3-203ENST00000366286 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
YBX3-203ENST00000366286 G3V3G9 751 aa13.1□□□□□ -0.31
YBX3-203ENST00000366286 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
YBX3-203ENST00000366286 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
YBX3-203ENST00000366286 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
YBX3-203ENST00000366286 IFIT5Q13325 482 aaKnown RBP13.1□□□□□ -0.31
YBX3-203ENST00000366286 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
YBX3-203ENST00000366286 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
YBX3-203ENST00000366286 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
YBX3-203ENST00000366286 ZNF609O15014 1411 aa13.1□□□□□ -0.31
YBX3-203ENST00000366286 UTYO14607 1347 aa13.1□□□□□ -0.31
YBX3-203ENST00000366286 CNTROBQ8N137 903 aa13.09□□□□□ -0.31
YBX3-203ENST00000366286 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
YBX3-203ENST00000366286 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
YBX3-203ENST00000366286 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
YBX3-203ENST00000366286 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
YBX3-203ENST00000366286 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
YBX3-203ENST00000366286 RPS12P25398 132 aaKnown RBP13.08□□□□□ -0.32
YBX3-203ENST00000366286 KLRK1P26718 216 aa13.08□□□□□ -0.32
YBX3-203ENST00000366286 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
YBX3-203ENST00000366286 CHRNDQ07001 517 aa13.08□□□□□ -0.32
YBX3-203ENST00000366286 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
YBX3-203ENST00000366286 ANKRD2Q9GZV1 360 aa13.08□□□□□ -0.32
YBX3-203ENST00000366286 CNOT7Q9UIV1 285 aaKnown RBP13.08□□□□□ -0.32
YBX3-203ENST00000366286 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
YBX3-203ENST00000366286 ZNF804BA4D1E1 1349 aa13.08□□□□□ -0.32
YBX3-203ENST00000366286 VIL1P09327 827 aaKnown RBP13.07□□□□□ -0.32
YBX3-203ENST00000366286 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
YBX3-203ENST00000366286 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
YBX3-203ENST00000366286 TAF7LQ5H9L4 462 aa13.07□□□□□ -0.32
YBX3-203ENST00000366286 TXNRD3Q86VQ6 643 aa13.07□□□□□ -0.32
YBX3-203ENST00000366286 DPF2Q92785 391 aa13.07□□□□□ -0.32
YBX3-203ENST00000366286 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
YBX3-203ENST00000366286 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 H7C1D1 291 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 TAF5LO75529 589 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 EGFRP00533 1210 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 KCNJ4P48050 445 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
YBX3-203ENST00000366286 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
YBX3-203ENST00000366286 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.32
YBX3-203ENST00000366286 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
YBX3-203ENST00000366286 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
YBX3-203ENST00000366286 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
YBX3-203ENST00000366286 CNTNAP1P78357 1384 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms