RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 TBC1D16Q8TBP0 767 aa27.4■■□□□ 1.98
CD47-202ENST00000361309 RBM26Q5T8P6 1007 aaKnown RBP27.39■■□□□ 1.98
CD47-202ENST00000361309 KRT26Q7Z3Y9 468 aa27.39■■□□□ 1.98
CD47-202ENST00000361309 FAM161AQ3B820 660 aa27.38■■□□□ 1.97
CD47-202ENST00000361309 ZBTB38Q8NAP3 1195 aaPredicted RBP27.38■■□□□ 1.97
CD47-202ENST00000361309 ZIC5Q96T25 663 aa27.38■■□□□ 1.97
CD47-202ENST00000361309 PHAXQ9H814 394 aaKnown RBP27.38■■□□□ 1.97
CD47-202ENST00000361309 PSME4Q14997 1843 aa27.37■■□□□ 1.97
CD47-202ENST00000361309 ZNF853P0CG23 659 aa27.37■■□□□ 1.97
CD47-202ENST00000361309 GOLGA2Q08379 1002 aa27.37■■□□□ 1.97
CD47-202ENST00000361309 NOGQ13253 232 aa27.37■■□□□ 1.97
CD47-202ENST00000361309 SEC31BQ9NQW1 1179 aa27.37■■□□□ 1.97
CD47-202ENST00000361309 DCPSQ96C86 337 aaKnown RBP27.36■■□□□ 1.97
CD47-202ENST00000361309 ZC3H12CQ9C0D7 883 aaKnown RBP27.36■■□□□ 1.97
CD47-202ENST00000361309 ADM5C9JUS6 153 aa27.35■■□□□ 1.97
CD47-202ENST00000361309 ELL2O00472 640 aaPredicted RBP27.35■■□□□ 1.97
CD47-202ENST00000361309 MYD88Q99836 296 aa27.35■■□□□ 1.97
CD47-202ENST00000361309 PODXL2Q9NZ53 605 aa27.35■■□□□ 1.97
CD47-202ENST00000361309 AKAP11Q9UKA4 1901 aa27.34■■□□□ 1.97
CD47-202ENST00000361309 VIL1P09327 827 aaKnown RBP27.34■■□□□ 1.97
CD47-202ENST00000361309 MCOLN1Q9GZU1 580 aa27.34■■□□□ 1.97
CD47-202ENST00000361309 GBA2Q9HCG7 927 aaPredicted RBP27.34■■□□□ 1.97
CD47-202ENST00000361309 ANKIB1Q9P2G1 1089 aa27.34■■□□□ 1.97
CD47-202ENST00000361309 UFL1O94874 794 aa27.33■■□□□ 1.97
CD47-202ENST00000361309 HSP90B1P14625 803 aaKnown RBP27.33■■□□□ 1.97
CD47-202ENST00000361309 KIF4BQ2VIQ3 1234 aa27.33■■□□□ 1.97
CD47-202ENST00000361309 RGMBQ6NW40 437 aa27.33■■□□□ 1.97
CD47-202ENST00000361309 C2orf69Q8N8R5 385 aa27.33■■□□□ 1.97
CD47-202ENST00000361309 IFT57Q9NWB7 429 aa27.33■■□□□ 1.97
CD47-202ENST00000361309 G3V3G9 751 aa27.32■■□□□ 1.96
CD47-202ENST00000361309 DCAF8Q5TAQ9 597 aa27.32■■□□□ 1.96
CD47-202ENST00000361309 JARID2Q92833 1246 aaPredicted RBP27.32■■□□□ 1.96
CD47-202ENST00000361309 GGA1Q9UJY5 639 aa27.32■■□□□ 1.96
CD47-202ENST00000361309 APAF1O14727 1248 aa27.31■■□□□ 1.96
CD47-202ENST00000361309 PCCAP05165 728 aaPredicted RBP27.31■■□□□ 1.96
CD47-202ENST00000361309 GNAI1P63096 354 aa27.31■■□□□ 1.96
CD47-202ENST00000361309 CCDC152Q4G0S7 254 aa27.31■■□□□ 1.96
CD47-202ENST00000361309 CCDC191Q8NCU4 936 aa27.31■■□□□ 1.96
CD47-202ENST00000361309 MYH3P11055 1940 aa27.31■■□□□ 1.96
CD47-202ENST00000361309 SPEF2Q9C093 1822 aa27.3■■□□□ 1.96
CD47-202ENST00000361309 FAM155AB1AL88 458 aaPredicted RBP27.3■■□□□ 1.96
CD47-202ENST00000361309 PDE8AO60658 829 aa27.3■■□□□ 1.96
CD47-202ENST00000361309 CCDC85AQ96PX6 553 aaPredicted RBP27.3■■□□□ 1.96
CD47-202ENST00000361309 GGA3Q9NZ52 723 aa27.3■■□□□ 1.96
CD47-202ENST00000361309 RGS19P49795 217 aa27.29■■□□□ 1.96
CD47-202ENST00000361309 CWC25Q9NXE8 425 aaPredicted RBP27.29■■□□□ 1.96
CD47-202ENST00000361309 ASTN2O75129 1339 aaPredicted RBP27.29■■□□□ 1.96
CD47-202ENST00000361309 MLLT1Q03111 559 aaPredicted RBP27.28■■□□□ 1.96
CD47-202ENST00000361309 CALD1Q05682 793 aaKnown RBP27.28■■□□□ 1.96
CD47-202ENST00000361309 DGKZQ13574 1117 aa27.28■■□□□ 1.96
CD47-202ENST00000361309 SULF1Q8IWU6 871 aa27.28■■□□□ 1.96
CD47-202ENST00000361309 C8orf58Q8NAV2 365 aa27.28■■□□□ 1.96
CD47-202ENST00000361309 ZNF157P51786 506 aaPredicted RBP27.27■■□□□ 1.96
CD47-202ENST00000361309 CCDC102AQ96A19 550 aa27.27■■□□□ 1.96
CD47-202ENST00000361309 METTL22Q9BUU2 404 aaPredicted RBP27.27■■□□□ 1.96
CD47-202ENST00000361309 PRKRIP1Q9H875 184 aaPredicted RBP27.27■■□□□ 1.96
CD47-202ENST00000361309 KIF23Q02241 960 aaPredicted RBP27.26■■□□□ 1.95
CD47-202ENST00000361309 RSBN1LQ6PCB5 846 aaPredicted RBP27.26■■□□□ 1.95
CD47-202ENST00000361309 ZNF280AP59817 542 aaPredicted RBP27.25■■□□□ 1.95
CD47-202ENST00000361309 ANKRD18AQ8IVF6 992 aa27.25■■□□□ 1.95
CD47-202ENST00000361309 AGBL3Q8NEM8 1001 aa27.25■■□□□ 1.95
CD47-202ENST00000361309 CDCA5Q96FF9 252 aa27.25■■□□□ 1.95
CD47-202ENST00000361309 ZNF609O15014 1411 aa27.24■■□□□ 1.95
CD47-202ENST00000361309 XDHP47989 1333 aa27.24■■□□□ 1.95
CD47-202ENST00000361309 DDX58O95786 925 aaKnown RBP27.24■■□□□ 1.95
CD47-202ENST00000361309 SCARF1Q14162 830 aa27.24■■□□□ 1.95
CD47-202ENST00000361309 CCDC30Q5VVM6 783 aa27.24■■□□□ 1.95
CD47-202ENST00000361309 ANGEL2Q5VTE6 544 aaKnown RBP27.23■■□□□ 1.95
CD47-202ENST00000361309 SLC10A3P09131 477 aa27.22■■□□□ 1.95
CD47-202ENST00000361309 SAGE1Q9NXZ1 904 aa27.22■■□□□ 1.95
CD47-202ENST00000361309 MAP3K2Q9Y2U5 619 aa27.22■■□□□ 1.95
CD47-202ENST00000361309 ATP2B4P23634 1241 aa27.21■■□□□ 1.95
CD47-202ENST00000361309 TSPYL6Q8N831 410 aa27.21■■□□□ 1.95
CD47-202ENST00000361309 GMLQ99445 158 aa27.21■■□□□ 1.95
CD47-202ENST00000361309 TRPA1O75762 1119 aa27.2■■□□□ 1.94
CD47-202ENST00000361309 CHMP4AQ9BY43 222 aa27.2■■□□□ 1.94
CD47-202ENST00000361309 MYOZ2Q9NPC6 264 aa27.2■■□□□ 1.94
CD47-202ENST00000361309 RNF186Q9NXI6 227 aa27.2■■□□□ 1.94
CD47-202ENST00000361309 ZNF646O15015 1829 aaPredicted RBP27.2■■□□□ 1.94
CD47-202ENST00000361309 TNRC18O15417 2968 aaPredicted RBP27.19■■□□□ 1.94
CD47-202ENST00000361309 USP17L3A6NCW0 530 aa27.19■■□□□ 1.94
CD47-202ENST00000361309 USP17L4A6NCW7 530 aa27.19■■□□□ 1.94
CD47-202ENST00000361309 WTIPA6NIX2 430 aaPredicted RBP27.19■■□□□ 1.94
CD47-202ENST00000361309 USP17L8P0C7I0 530 aa27.19■■□□□ 1.94
CD47-202ENST00000361309 CTSWP56202 376 aa27.19■■□□□ 1.94
CD47-202ENST00000361309 USP17L1Q7RTZ2 530 aa27.19■■□□□ 1.94
CD47-202ENST00000361309 PODNQ7Z5L7 613 aa27.19■■□□□ 1.94
CD47-202ENST00000361309 CDC5LQ99459 802 aaKnown RBP27.19■■□□□ 1.94
CD47-202ENST00000361309 PAPPA2Q9BXP8 1791 aa27.19■■□□□ 1.94
CD47-202ENST00000361309 PI4KAP2A4QPH2 592 aa27.18■■□□□ 1.94
CD47-202ENST00000361309 IGKV5-2P06315 115 aa27.18■■□□□ 1.94
CD47-202ENST00000361309 KSR2Q6VAB6 950 aa27.18■■□□□ 1.94
CD47-202ENST00000361309 PI4KAP1Q8N8J0 262 aa27.18■■□□□ 1.94
CD47-202ENST00000361309 CSRNP1Q96S65 589 aa27.18■■□□□ 1.94
CD47-202ENST00000361309 TTLL11Q8NHH1 800 aa27.17■■□□□ 1.94
CD47-202ENST00000361309 GREM2Q9H772 168 aa27.16■■□□□ 1.94
CD47-202ENST00000361309 MINPP1Q9UNW1 487 aa27.16■■□□□ 1.94
CD47-202ENST00000361309 SCAF8Q9UPN6 1271 aaKnown RBP27.16■■□□□ 1.94
CD47-202ENST00000361309 PITPNM2Q9BZ72 1349 aa27.16■■□□□ 1.94
CD47-202ENST00000361309 RASAL3Q86YV0 1011 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms