RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CCDC102BQ68D86 513 aa19.6■□□□□ 0.73
CACNA1A-201ENST00000360228 CEP128Q6ZU80 1094 aa19.6■□□□□ 0.73
CACNA1A-201ENST00000360228 ERMNQ8TAM6 284 aa19.6■□□□□ 0.73
CACNA1A-201ENST00000360228 PDE4BQ07343 736 aa19.6■□□□□ 0.73
CACNA1A-201ENST00000360228 UBE2HP62256 183 aa19.6■□□□□ 0.73
CACNA1A-201ENST00000360228 NEDD9Q14511 834 aa19.6■□□□□ 0.73
CACNA1A-201ENST00000360228 SYKP43405 635 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 DNAI1Q9UI46 699 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 METAP2P50579 478 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 PROCA1Q8NCQ7 364 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 SLC26A6Q9BXS9 759 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 DACT3Q96B18 629 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 A0A1B0GUL7 405 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 B4GALNT4Q76KP1 1039 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 RBM27Q9P2N5 1060 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 TAF12Q16514 161 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 SDCCAG8Q86SQ7 713 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 LMBR1Q8WVP7 490 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 ATP6V0A2Q9Y487 856 aa19.59■□□□□ 0.73
CACNA1A-201ENST00000360228 TSPY2A6NKD2 308 aa19.58■□□□□ 0.73
CACNA1A-201ENST00000360228 GNAT3A8MTJ3 354 aa19.58■□□□□ 0.73
CACNA1A-201ENST00000360228 SSFA2P28290 1259 aa19.58■□□□□ 0.73
CACNA1A-201ENST00000360228 TNPO1Q92973 898 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-201ENST00000360228 ATP2B3Q16720 1220 aa19.58■□□□□ 0.72
CACNA1A-201ENST00000360228 WHAMMP3Q1A5X7 153 aa19.58■□□□□ 0.72
CACNA1A-201ENST00000360228 NCBP1Q09161 790 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-201ENST00000360228 RRAGBQ5VZM2 374 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 ZNF830Q96NB3 372 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 MIS18AQ9NYP9 233 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 VIMP08670 466 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 MFSD6Q6ZSS7 791 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 VCXQ9H320 206 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 IRX5P78411 483 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 ZNF365Q70YC5 407 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 MAP7Q14244 749 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 ANO6Q4KMQ2 910 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 AGTPBP1Q9UPW5 1226 aa19.57■□□□□ 0.72
CACNA1A-201ENST00000360228 E7EVH7 732 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 MAP3K7CLP57077 242 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 FAM76AQ8TAV0 307 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 IARSP41252 1262 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 TSNAXIP1Q2TAA8 658 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 NBPF11Q86T75 865 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 FAM13AO94988 1023 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 FYB2Q5VWT5 728 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 ARHGEF2Q92974 986 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 MTRF1LQ9UGC7 380 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 CDK19Q9BWU1 502 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 TLDC2A0PJX2 215 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 CACYBPQ9HB71 228 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 RRS1Q15050 365 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 INF2Q27J81 1249 aa19.56■□□□□ 0.72
CACNA1A-201ENST00000360228 A6NNZ2 444 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 TUBBP07437 444 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 TUBB8Q3ZCM7 444 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 POLA1P09884 1462 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 KRT86O43790 486 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 ATP5DP30049 168 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 STAC3Q96MF2 364 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 GIPC1O14908 333 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 MIER3Q7Z3K6 550 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 GSDMBQ8TAX9 411 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 HPDP32754 393 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 AKNAD1Q5T1N1 836 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 PHLDB2Q86SQ0 1253 aa19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 ZNF219Q9P2Y4 722 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-201ENST00000360228 SKILP12757 684 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 SYT1P21579 422 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 FMNL3Q8IVF7 1028 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 GIMAP6Q6P9H5 292 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 CCDC117Q8IWD4 279 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 MYD88Q99836 296 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 TSGA10Q9BZW7 698 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 ZSCAN23Q3MJ62 389 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 MSANTD4Q8NCY6 345 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 NKIRAS1Q9NYS0 192 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 TRIM35Q9UPQ4 493 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 RHOXF2BP0C7M4 288 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 CLNS1AP54105 237 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 KIFC2Q96AC6 838 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 RHOXF2Q9BQY4 288 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 GABPAQ06546 454 aa19.54■□□□□ 0.72
CACNA1A-201ENST00000360228 KIF21BO75037 1637 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 ZNF131P52739 623 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 PPP1R21Q6ZMI0 780 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 PLS1Q14651 629 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 PRDM11Q9NQV5 511 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 CLUL1Q15846 466 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 CCDC89Q8N998 374 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 USP16Q9Y5T5 823 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 VAV2P52735 878 aa19.53■□□□□ 0.72
CACNA1A-201ENST00000360228 HCLS1P14317 486 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms