RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 COL4A1P02462 1669 aa15.4■□□□□ 0.06
NIF3L1-201ENST00000359683 EYA2O00167 538 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 CIAO1O76071 339 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 LDHAL6AQ6ZMR3 332 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 MPHOSPH8Q99549 860 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 PUS3Q9BZE2 481 aaKnown RBP15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 RIPOR2Q9Y4F9 1068 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 ATG9AQ7Z3C6 839 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 TMC4Q7Z404 712 aa15.39■□□□□ 0.05
NIF3L1-201ENST00000359683 DLEC1Q9Y238 1755 aa15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 HSP90AB4PQ58FF6 505 aa15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 TTLL6Q8N841 843 aa15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 SIL1Q9H173 461 aa15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 PIM2Q9P1W9 311 aa15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
NIF3L1-201ENST00000359683 IL15P40933 162 aaPredicted RBP15.37■□□□□ 0.05
NIF3L1-201ENST00000359683 SMC5Q8IY18 1101 aa15.37■□□□□ 0.05
NIF3L1-201ENST00000359683 GCC1Q96CN9 775 aa15.37■□□□□ 0.05
NIF3L1-201ENST00000359683 CNNM1Q9NRU3 951 aa15.37■□□□□ 0.05
NIF3L1-201ENST00000359683 EXOC6BQ9Y2D4 811 aa15.37■□□□□ 0.05
NIF3L1-201ENST00000359683 PPEF1O14829 653 aaPredicted RBP15.36■□□□□ 0.05
NIF3L1-201ENST00000359683 RAB11FIP3O75154 756 aa15.36■□□□□ 0.05
NIF3L1-201ENST00000359683 PRPF40BQ6NWY9 871 aaKnown RBP15.36■□□□□ 0.05
NIF3L1-201ENST00000359683 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
NIF3L1-201ENST00000359683 C7orf43Q8WVR3 580 aa15.36■□□□□ 0.05
NIF3L1-201ENST00000359683 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
NIF3L1-201ENST00000359683 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
NIF3L1-201ENST00000359683 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 SASH1O94885 1247 aa15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 SLX4Q8IY92 1834 aa15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 ARFGEF1Q9Y6D6 1849 aa15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 MROH5Q6ZUA9 1318 aa15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 KDM2BQ8NHM5 1336 aa15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 ERC1Q8IUD2 1116 aa15.35■□□□□ 0.05
NIF3L1-201ENST00000359683 CHRNDQ07001 517 aa15.34■□□□□ 0.05
NIF3L1-201ENST00000359683 OS9Q13438 667 aaPredicted RBP15.34■□□□□ 0.05
NIF3L1-201ENST00000359683 DALRD3Q5D0E6 543 aaKnown RBP15.34■□□□□ 0.05
NIF3L1-201ENST00000359683 VGLL2Q8N8G2 317 aa15.34■□□□□ 0.05
NIF3L1-201ENST00000359683 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
NIF3L1-201ENST00000359683 KIF1BPQ96EK5 621 aa15.34■□□□□ 0.05
NIF3L1-201ENST00000359683 GPBP1L1Q9HC44 474 aaPredicted RBP15.34■□□□□ 0.05
NIF3L1-201ENST00000359683 SPEF2Q9C093 1822 aa15.33■□□□□ 0.04
NIF3L1-201ENST00000359683 METTL24Q5JXM2 366 aa15.33■□□□□ 0.04
NIF3L1-201ENST00000359683 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
NIF3L1-201ENST00000359683 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.04
NIF3L1-201ENST00000359683 ANKRD2Q9GZV1 360 aa15.33■□□□□ 0.04
NIF3L1-201ENST00000359683 CEP126Q9P2H0 1117 aa15.33■□□□□ 0.04
NIF3L1-201ENST00000359683 PDE8BO95263 885 aa15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 TFCP2Q12800 502 aa15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 SLC51AQ86UW1 340 aa15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 HELBQ8NG08 1087 aaPredicted RBP15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 LRRCC1Q9C099 1032 aa15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 GPR108Q9NPR9 543 aa15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
NIF3L1-201ENST00000359683 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 LRRC37AA6NMS7 1700 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 APBB1O00213 710 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 C21orf2O43822 256 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 TAF5LO75529 589 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 GPSM2P81274 684 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 GRIPAP1Q4V328 841 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 ANKRD45Q5TZF3 282 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 OLFM4Q6UX06 510 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 BCS1LQ9Y276 419 aa15.31■□□□□ 0.04
NIF3L1-201ENST00000359683 XDHP47989 1333 aa15.3■□□□□ 0.04
NIF3L1-201ENST00000359683 FGFR2P21802 821 aa15.3■□□□□ 0.04
NIF3L1-201ENST00000359683 NUCB1Q02818 461 aa15.3■□□□□ 0.04
NIF3L1-201ENST00000359683 MPNDQ8N594 471 aa15.3■□□□□ 0.04
NIF3L1-201ENST00000359683 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
NIF3L1-201ENST00000359683 LEMD3Q9Y2U8 911 aa15.3■□□□□ 0.04
NIF3L1-201ENST00000359683 SMARCA5O60264 1052 aaPredicted RBP15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 UBE4AQ14139 1066 aa15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 IL1RAPL2Q9NP60 686 aa15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 AKAP2Q9Y2D5 859 aa15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
NIF3L1-201ENST00000359683 ATP2B4P23634 1241 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 PUM3Q15397 648 aaKnown RBP15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 TNNI3KQ59H18 835 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 RTKN2Q8IZC4 609 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 EAF2Q96CJ1 260 aaPredicted RBP15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 FPGT-TNNI3KV9GXZ4 949 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 A0A1B0GUL6 1792 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 WTIPA6NIX2 430 aaPredicted RBP15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 SNAP23O00161 211 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 TIMM10P62072 90 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 DPP8Q6V1X1 898 aaPredicted RBP15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 CHD1LQ86WJ1 897 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 CLASRPQ8N2M8 674 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms