RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 CHMP3Q9Y3E7 222 aa13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 POTECB2RU33 542 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 HIP1O00291 1037 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 ECHDC1Q9NTX5 307 aa13.1□□□□□ -0.31
TRAPPC4-201ENST00000359005 NTSR2O95665 410 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 NPR1P16066 1061 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 SDSP20132 328 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 MCCP23508 829 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 CASP7P55210 303 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 TAF7LQ5H9L4 462 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 LMBR1LQ6UX01 489 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 TBC1D9Q6ZT07 1266 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
TRAPPC4-201ENST00000359005 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 CIAO1O76071 339 aa13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 RUFY2Q8WXA3 655 aa13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 IL1RAPL2Q9NP60 686 aa13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 SALL3Q9BXA9 1300 aa13.08□□□□□ -0.32
TRAPPC4-201ENST00000359005 GLTPD2A6NH11 291 aa13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 TOMM70O94826 608 aa13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 GSPT1P15170 499 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 HSPA6P17066 643 aa13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 GTF2E1P29083 439 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 IFIT5Q13325 482 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 AACSQ86V21 672 aa13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
TRAPPC4-201ENST00000359005 PDE8AO60658 829 aa13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 HOXA10P31260 410 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 RBM25P49756 843 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 HTRA3P83110 453 aa13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 FOXO4P98177 505 aa13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 LRRFIP1Q32MZ4 808 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 SLC10A5Q5PT55 438 aa13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 UTP14AQ9BVJ6 771 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
TRAPPC4-201ENST00000359005 NUP98P52948 1817 aa13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 NYXQ9GZU5 481 aa13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 SIL1Q9H173 461 aa13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 LTBP3Q9NS15 1303 aa13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-201ENST00000359005 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 PCNTO95613 3336 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 EYA2O00167 538 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 DDNO94850 711 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 CSF1RP07333 972 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 RFX5P48382 616 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 KIAA1211Q6ZU35 1233 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 OTUD7AQ8TE49 926 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
TRAPPC4-201ENST00000359005 SASH1O94885 1247 aa13.03□□□□□ -0.32
TRAPPC4-201ENST00000359005 SEC24BO95487 1268 aa13.03□□□□□ -0.32
TRAPPC4-201ENST00000359005 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
TRAPPC4-201ENST00000359005 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-201ENST00000359005 FAM89AQ96GI7 184 aa13.03□□□□□ -0.32
TRAPPC4-201ENST00000359005 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 ALDH1B1P30837 517 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 CTSWP56202 376 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 CCDC152Q4G0S7 254 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 TNNI3KQ59H18 835 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 DNAJC5GQ8N7S2 189 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 PI4K2BQ8TCG2 481 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 FPGT-TNNI3KV9GXZ4 949 aa13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-201ENST00000359005 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 ATP5JP18859 108 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 TFCP2Q12800 502 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms