RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 PLA2G4AP47712 749 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 SMARCE1Q969G3 411 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 BORCS6Q96GS4 357 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 ZNF215Q9UL58 517 aaPredicted RBP11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 NOB1Q9ULX3 412 aaKnown RBP11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 FHOD1Q9Y613 1164 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 PTPRCP08575 1304 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 ZSCAN26Q16670 478 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 CCDC112Q8NEF3 446 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 RAI14Q9P0K7 980 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 RRP15Q9Y3B9 282 aaKnown RBP11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 CD2APQ9Y5K6 639 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
SMARCAL1-202ENST00000358207 CNTNAP4Q9C0A0 1308 aa11.02□□□□□ -0.64
SMARCAL1-202ENST00000358207 A0A1B0GUL7 405 aa11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 KIF1CO43896 1103 aaKnown RBP11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 ELF2Q15723 593 aa11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 FOXD4L5Q5VV16 416 aaPredicted RBP11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 TXLNBQ8N3L3 684 aa11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 SPC24Q8NBT2 197 aa11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 FOXD4L4Q8WXT5 416 aaPredicted RBP11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 KDM4AO75164 1064 aa11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 MBD3O95983 291 aa11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
SMARCAL1-202ENST00000358207 KDM3BQ7LBC6 1761 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 ERVV-2B6SEH9 535 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 HCLS1P14317 486 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 SYT17Q9BSW7 474 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 C1orf115Q9H7X2 142 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 SPG7Q9UQ90 795 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 CYP27B1O15528 508 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 TTC31Q49AM3 519 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 TSPYL4Q9UJ04 414 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 SBF1O95248 1867 aa11.01□□□□□ -0.65
SMARCAL1-202ENST00000358207 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 POLR3GO15318 223 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-202ENST00000358207 ZNF853P0CG23 659 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 ADRA2BP18089 450 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-202ENST00000358207 FAM184AQ8NB25 1140 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 RAPGEF4Q8WZA2 1011 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 N4BP2Q86UW6 1770 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-202ENST00000358207 KCNQ3O43525 872 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 ANXA1P04083 346 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 TRIM27P14373 513 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 PLCB2Q00722 1185 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 ZNF530Q6P9A1 599 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-202ENST00000358207 CCDC91Q7Z6B0 441 aa11□□□□□ -0.65
SMARCAL1-202ENST00000358207 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 EIF2S2P20042 333 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 PTGS1P23219 599 aa10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 LRMPQ12912 555 aa10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 IL17REQ8NFR9 667 aa10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 DEF6Q9H4E7 631 aa10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 PAXBP1Q9Y5B6 917 aa10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 SWT1Q5T5J6 900 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 CALR3Q96L12 384 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-202ENST00000358207 PHKG2P15735 406 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 GNAI1P63096 354 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 FHDC1Q9C0D6 1143 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 ZCCHC17Q9NP64 241 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 PPP1R1BQ9UD71 204 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 TIAM2Q8IVF5 1701 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 NPHP1O15259 732 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 SMARCA5O60264 1052 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 PNMA6AP0CW24 399 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 AMOTQ4VCS5 1084 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 GOLGA6L1Q8N7Z2 621 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 RGL2O15211 777 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 VAMP4O75379 141 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 H2AFXP16104 143 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 POLD1P28340 1107 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 TMEM57Q8N5G2 664 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 CFAP44Q96MT7 982 aa10.98□□□□□ -0.65
SMARCAL1-202ENST00000358207 INHBEP58166 350 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 PPP2R5AQ15172 486 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 SLC4A10Q6U841 1118 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 PXDNLA1KZ92 1463 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 ANKRD31Q8N7Z5 1873 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 GNAT3A8MTJ3 354 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 MAGEA9P43362 315 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 BIRC2Q13490 618 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 LRCH2Q5VUJ6 765 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 ZKSCAN2Q63HK3 967 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 REXO1L1PQ8IX06 675 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 MNS1Q8NEH6 495 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 ZNF592Q92610 1267 aa10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 PDGFDQ9GZP0 370 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-202ENST00000358207 DLG5Q8TDM6 1919 aa10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 F6X3S4 739 aa10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 YY1P25490 414 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms